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Energy
Capacity to do work
Potential energy
Stored energy (energy of position)
Kinetic energy
Energy of motion
Chemical energy
Energy stored in a molecule’s chemical bonds is the most important form of energy in the human body
What is chemical energy used for
Movement, molecular synthesis, and concentration gradients
When is chemical energy released
When bonds break during reactions
Electrical energy
Movement of charged particles
Mechanical energy
Exhibited by objects in motion due to an applied force
Sound energy
Molecular compression caused by a vibrating object
Radiant energy
Energy of electromagnetic waves
Heat energy
Kinetic energy associates with random motion of atoms, ions, or molecules; usually not available to do work; waste or by-product
Thermodynamics
Study of energy transformation
First law
Energy cannot be created or destroyed, only converted from one form to another
Second law
Every time energy is transformed, some of it is converted to heat
Chemical reactions
Occur when chemical bonds in existing molecular structures are broken, rearranged, or formed
Reactants
Substances present prior to start of a chemical reaction, written on the left
Products
Substances formed from the reaction, written on the right side
Decomposition reaction
Initial large molecule broken down into smaller structures, AB→ A+B, catabolism or catabolic reactions
Synthesis reaction
Two or more structures combine to form a larger structure, A+B→ AB, anabolism
Exchange reaction
Groups exchange between two chemical structures, AB+C→ A+BC, has both decomposition and synthesis components, most prevalent in human body
Oxidation-reduction reaction (redox reaction)
Type of chemical reaction where electrons are moved from one structure to another
Structure that loses an electron (electron donor)
Oxidized
Structure that gains an electron (electron acceptor)
Reduced
Exergonic reactions
Reactants have less energy within bonds than products, energy must be released, decomposition or catabolic
Endergonic reactions
Reactants have less energy in bonds than products, energy must be put in (needed), synthesis or anabolic
Irreversible reaction
Reaction that results in a net loss of reactants and a net gain in products; A+B→ AB or AB→ A+B
Reversible reaction
Does not proceed only to the right, reactants become products and products become reactants at equal rates
Equilibrum
No net change in concentration of reactants or products in a reaction
Activation energy (Ea)
Energy required to break existing bonds
Overcoming reaction rate
Presence of an enzyme lowers Ea, in lab increasing temperature significantly will denature proteins
Functions on enzymes
Decrease activation of cellular reactions, act as biological catalysts
Uncatalyzed reaction
No enzyme present
Catalyzed reaction
Enzyme present
Enzyme diversity
Enzymes can stay within cells, become embedded in plasma membrane, be secreted from cells
Active site
Unique 3-D structure in a protein chain
Enzyme-substrate complex
Temporarily forms when enzyme meet at active site
Enzyme catalysis
Substrate enters active site, forms enzyme substrate complex, enzyme shape changes, binds to substrate, chemical bonds formed or broken from stress, products releases, enzyme available for new substrate
Conformational change
Enzyme changes shape slightly
Induced fit model
Enzyme binds tightly to substrate
Accelerate reaction rates
Increase enzyme or substrate concentration, temperature increase, pH
Inhibitors
Bind to enzymes and prevent enzymatic catalysts
Competitive inhibition
Resembles substrate and binds to active site
Noncompetitive inhibitor
Does not bind to active site, binds to allosteric site to produce a small conformational change preventing the substrate from binding
Cofactors
Helps existing enzymes work properly, existing enzymes may be turned on by adding
Metabolic pathway
Series of enzymes that convert substances to products, product of on enzyme becomes the substrate of the next
Multienzyme complex
Group of enzymes that are physically attached, work in a sequence, produce one reaction serves as substrate for another
Multienzyme complex advantages
Less likely for substance to diffuse away, slowly or failing to complete pathway, single multienzyme complex can be regulated rather than individual enzymes
Cellular resiration
Exergonic multistep pathway, energy released to make ATP, oxygen required, organic molecules are oxidized and disassembled by series of enzymes
Glucose oxidation
Step by step breakdown of glucose to release energy, CO2 and H2O formed
Glycolysis
Does not require oxygen, occurs in cytosol
Glycolysis inital substrate
1 glucose
Glycolysis products
2 pyruvate, 2 ATP, 2 NADH
Intermediate stage
Requires oxygen, occurs in matrix of mitochondria
What enters intermediate stage
2 pyruvate
Intermediate stage products
2 Acetyl CoA, 2 NADH, 2 CO2
Citric acid cycle
Requires oxygen, occurs in matrix of mitochondria
What enters citric acid cycle
Acetyl CoA
Citric acid cycle products
1 ATP, 3 NADH, 1 FADH2 , 2 CO2
Two turns of citric acid cycle products
2 ATP, 6 NADH, 2 FADH2 , 4 CO2
Electron transport system
Transfer of stored energy from NADH and FADH2 to make ATP
Electrons from NADH enter at the top of the first hydrogen H+ pump
3 ATP produced
Electrons from FADH2 pass through the second hydrogen H+ pump
2 ATP produced
ATP production
38 ATP produced, actual yield is 30 ATP due to steps requiring energy