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visual detection methods
alternate lighting sources
stain characteristics
may not be readily visible
microscopic detection methods
low and high magnification
chemical detection methods
screening versus spot tests
presumptive and confirmatory tests
what is the relevance of detection methods?
-DNA profiling isn't enough
Body fluid identification provides context to the deposition of biological material
-consider issue of transfer and persistence
-within framework of case info
what is blood?
Complex liquid/suspension
55% plasma and 45% cellular components
DNA profile is in the white blood cells
presumptive tests for blood
Kastle Mayer (KM)/ Leucomalacite Green (LMG)
Detects peroxidase activity in blood
2/3 reagents: hydrogen peroxide and reduced dye
-phenolthalein (KM)
-Leucomalacite Green (LMG)
Distinguish blood human and animal
Highly sensitive more KM than LMG
how do presumptive tests for blood work?
Peroxidase acts on H2O2 releasing oxygen
Causes oxidation of the dye indicated by colour change
pink (KM) green (LMG)
Destructive technique
chemistry of Kastle Mayer test
2 stage test:
Reduced KM/LMG = colourless
Blood and reduced KM/LMG = colourless
Blood and reduced KM/LMG and [O] = coloured (intense magenta/blue/green)
KM is explosive so CSI cannot carry equipment to use it
chemical equation for what occurs with the blood presumptive tests
Blood + KM /LMG reagent + H202 H20 + free oxygen radical colour change (magenta/green)
Hemastix test
Tetramethylbenzidine (TMB)
Used in solution
Portable- ideal for scene use
Positive indicated by blue-green colour
Reagent strips originally designed for use in testing blood in urine
Plastic strips with test reagents bound to a pad at one end
+ from orange to green
luminol
Chemiluminescent - uses peroxidase activity of haem group in haemoglobin (Fe2+) to catalyse the production of a blue-white light
Mainly made of water and is done at end as it is destructive and has to be done in pitch black
Enhances traces of blood and is sensitive
More intense in older/decomposing blood stains
Glow fades quickly but can be captured with a photo
Can allow pattern analysis is photographed
More sensitive= increase in false positive anything containing iron will test positive
Chemical doesn’t inhibit/ruin samples
Can be used on cold cases as it is so sensitive able to detect but not necessarily get a profile from it
Bleach is main false positive
lab use of presumptive test
spot test-visible stains with a blood-like appearance
Rub stain with folded filter paper, unfold, add KM/LMG then H2O2
Screening test-dark coloured items where blood is not readily available
Methodically rub sections of the item with folded filter paper and test each as above
Direct test-dilute stains
Cut thread from exhibit and test directly on filter paper
false positives for blood presumptive tests
Some plant material- in particular horseradish
Oxidising agents such as cleaning chemicals
Give reaction before addition of h2o2
Animal materials with contamination traces of blood
If dye from clothing exhibit is an issue, swap between KM and LMG
human blood kits - ABA Haematrace
Confirmatory test for blood
Only humans, higher primates and ferret positive result
Like covid test
Used in instances where get a good KM reaction but not a good DNA profile
Cross reactivity with other bodily fluids -faeces, nasal secretions where blood may be present
menstrual blood test
Like covid test
Looks for d-dimer as marker for menstrual blood
semen
3ml of semen per ejaculation
Slightly alkaline pH of 7.2-7.7
Testes produce 200-300 million sperm every day
Pre-ejaculate can be both AP and sperm rich
More sperm found in 1st portion of ejaculate
Can be variable e.g. repeated intercourse, decreases volume
Long abstinence can increase volume up to 13ml 100 million spermatosa per ml
Need 6 to produce profile
Whole semen is composed of cells so can get DNA profile from vasectomised males
sperm morphology
Presence of sperm considered confirmatory for semen
Presence of tails may indicate recent deposition-usually lost within first 48 hrs
Cell wall is highly resistant to anything
what happens to sperm tails?
Spermatosa are the smallest cells in body with a total length of approx., 005mm
Middle piece and tail break off when sperm enter egg
Therefore male mtDNA doesn't make it into cells of embryo
mtDNA inherited maternally
sperm tails
Not often seen in casework, consequence of slide preparation as much as natural degradation
Vaginal swabs- tails lost usually within 8-10hrs of ejaculation
Anal swabs- less likely to find tails on sperm compared with vaginal swabs
If tails are present- very recent ejaculate
seminal fluid
rich in enzymes and non-enzyme constituents
seminal fluid - enzyme constituents
acid phosphatase (richest known source)
Alkaline phosphatase
Nucleotidases
Pyrophosphatases
Several ATP-ases
seminal fluid - non-enzyme constituents
Phosphorylcholine (only in fresh ejaculate)- immediately dephosphorylated by AP to choline (choline test)
Hormones
Fructose
Citric acid
Potassium
Flavins
detection of semen
works with wet and dry
visual detection of semen
Dry-white and crusty
Liquid- opaque, highly viscose solution
Crime scope- semen stains can fluoresce
chemical detection of semen using presumptive tests
AP reagent
Florence iodine (choline test)
microscopic detection of semen
Microscopic examination and identification of sperm; DNA profiling of semen
AP
acid phosphatase
presumptive tests for semen
AP test- high levels in seminal fluid
Detects the presence of Acid Phosphatase in seminal fluid
Acid Phosphatase is water soluble, therefore washing removes AP activity
Its presence is independent of the presence of spermatozoa
Semen stains are often not visible- AP test used to screen fabric items (to locate areas for further testing)
Or to test supernatant from a swab extraction
AP (acid phosphatase test)
Reagent is sodium a-naphthyl phosphate and brentamine fast blue
Acid phosphatase causes hydrolysis of a-naphthyl phosphate to sodium phosphate and a-naphthol
a-naphthol reacts with brentamine fast blue to give a purple azo dye
Strength of AP reaction characterised by:
Speed of reaction
Intensity of colour change
Shade of colour (often subjective-with experience)
AP breaks down 48-72 hours after ejaculation intimate swabs
chemical reaction for the AP test
Sodium a-naphthyl phosphate + AP (from semen)
Sodium phosphate + naphthol + brentamine fast blue
Purple Azo dye
AP screening test
Wet test
Moisten exhibit and position blotting paper
Outline item and apply firm pressure
Remove blotting paper & spray in fume cupboard with a chemical reagent used to detect AP
Time reaction - initially 2 mins
Protect item with polythene and return test paper to locate stain
limitations of AP test
Vaginal secretions also contain AP- although reactions tend to be pinker rather than purple and if bacteria- blue/grey
false positives for AP test
Cauliflower/sprouts - pink/brown
Tea - strong purple
Some toiletries - strong purple
Spermicides - grey reactions
Faeces and urine - purple
removal of cellular material
Sodium dodecyl sulfate (SDS)
-detergent
-denatures membrane proteins & unfolds them into polypeptide chains
Proteinase K (ProK)
-an endopeptidase, breaks polypeptide chains into smaller molecules
-named for keratin hydrolysing properties
Sperm remain intact, tails are lost (but often fall off during swab/stain extraction anyway
microscopy - confirmatory test for sperm
AP test locates stain
Stain extraction and microscopy of cell pellet identifies sperm
Assessment of amount of sperm uses and arbitrary numbering system (trace, 1+ to 4+), linked to persistence data
Heavy cell coverage can be problematic- use of SDS & Proteinase K to remove them
H&E (haematoxylin and eosin) stain
Haematoxylin- stains nucleic acids purplish blue (nuclei, ribosomes and RER) e.g. sperm heads
Eosin- stains cytoplasm pink e.g. sperm tails, epithelial cells
Florence iodine (choline test)
Identifies presence of choline found in high level in seminal fluid
Choline is water soluble- not detected after washing
Not as sensitive as AP and cannot be used for screening
Short golden-brown crystals indicate a positive result
christmas tree stain
Nuclear fast red & picroindigocarmine (PIC)
Sperm heads (nucleus)
Epithelial (cytoplasm) cells green
saliva
Watery fluid secreted from salivary glands of mouth
Humans produce 1-1.5 litres per day
what does saliva consist of?
Mucin
Alkaline phosphate
Thiocyanite ions
Nitrate ions
Cells- mainly bacteria, but also epithelial and leukocytes
Salivary amylase
what is saliva and what does it help do?
It is an alkaline homogenous fluid
Aids breakdown of food for easy swallowing
Initiates digestion of starch using amylase
Buccal epithelial cells- not a true component of saliva but become mixed as comes from mouth lining
detecting saliva
Look for visual stain
Screening/testing for activity of enzymes normally present in saliva (Phadebas test/amylase paper)
Looking for buccal epithelial cells
amylase
-enzyme catalyst - alpha and beta forms
Chromosome 1 has 2 loci coding for amylase:
AMY1
Saliva, breast milk, perspiration
Concentration 50x greater in saliva
AMY2
Pancreas, semen, vaginal secretions
Phadebas test
Made of starch polymer linked to blue dye marker- insoluble in water
Amylase breaks down starch and releases blue dye
Paper sprayed with Phadebas solution or in test tube add tablets to water and supernatant
Apply paper to moistened item and press for 5-10-40 mins
Tube test is incubated in 37 degrees for 30 mins
Amylase breaks down starch releasing the water soluble blue dye
Presumptive test- detects alpha amylase
Azure blue dye attached to starch complex sprayed onto paper
Spray with iodine working solution
limitations of Phadebas test
Time consuming and requires regular observation
Poor sensitivity- false negatives
Poor specificity:
Vaginal amylase is problematic in sexual offense investigations
Faecal amylase is indistinguishable- although faecal staining Is visible
Buccal cells
Buccal cells are squamous nucleated epithelial cells
Similar to those found in moist orifices such as the vagina
NOT a confirmatory test
Can help ID a suitable sample for DNA
May assist in interpretation that saliva is present
urine
Watery solution of metabolic wastes such as urea, creatinine dissolved salts and organic materials
Ph close to neutral
Not considered good source of DNA
Colour varies but more identified by distinctive smell on stained materials (ammonia, breakdown product of urea by bacteria)
May see a tide mark
No screening tests so need to know where you expect urine to be
Selected areas can be tested using creatinine and urea tests
Creatinine test
Creatinine provides energy for muscle contraction, is unstable and is present in serum, RBC, sweat, bile and gastrointestinal fluids
No function in the body and is a waste material which is filtered through the kidneys, concentrated in the tubules and then excreted in urine
Concentration of creatinine varies dependant on concentration of urine
Produces orange colour with picric acid in alkaline medium
Colour depends on concentration of creatinine which is dependent on diet/liquid intake
urea test - DMAC
Nitrogen wate- metabolite of protein
Initial product of protein metabolism is ammonia which is toxic to body
Mammals excrete ammonia in form of urea dissolved in urine
Urea produced by liver is filtered and excreted in urine-small amount excreted in sweat
DMAC test- +stains will turn magenta
faeces
End product of digestion
Consists of:
Undigested/indigestible food
Bacteria
Mucus cells
Average 100g daily
Visible brown stain due to bilirubin presence
Odour due to breakdown of amino acids into skatole and indole by bacteria
testing for faeces
Small amount of stain can be diluted in water, spotted onto slide and examined microscopically
Things may be seen:
Seeds
Starch grains
Parasites
Bacteria
Yeasts
Hair
urobilinogen test
Bile pigment excreted in faeces, which fluoresces with the addition of a reagent
Produces a 2 phase solution
View under low wave UV light
Orange, yellow or apple green fluorescence in lower phase indicates urobilinogen
Variation in colour is diet dependent
faeces and DNA
Generally seen on items as smears- sensitivity increased with the introduction of DNA-17
High bacterial content so degradation of DNA
sweat
Distinct odour
Stains white/tide mark
Test
-extract
-prepare slide
-examine for epithelial cells
No real detection tests
vomit
No detection tests
Distinct smell
Can be tested for
-amylase
-acids (Ph)
-microscopic food stuffs
skin tissue
Impacted skin can be found on items
Identify presence of possible skin under LPM-can be examined under HPM if critical to case
Report as 'apparent skin'
Important in assault cases where IP has been subject to blunt force trauma e.g. on weapons or on shoes following kicking/stamping assault
Examination strategies should include looking for impacted skin on such items
blood
presumptive
-Kastle Mayer
-Leucomalacite green
-luminol
-haemastix
confirmatory
-ABA haematrace (human specific)
-microscopy (H&E)
semen
presumptive
-AP test (acid phosphatase)
confirmatory
-microscopy (H&E, Christmas tree stain)
azoospermic
no sperm count
oligozoospermic
low sperm count
saliva
presumptive
-Phadebas
—no specific confirmatory test but can do microscopy to identify epithelial/buccal cells
KM reaction
Testing for haemoglobin (has peroxidase activity)
Peroxidase splits h2o2 reagent into h2 and o2
[o] and phenolphthalein causes pink colour change
Pretty much instantaneous result
False positives:
Horseradish
Rusty items
Cleaning products (oxidising agents)
Phadebas reaction
Testing for amylase in saliva
Amylase hydrolyses starch causing a blue-dye to be released
Phadebas solution
Detects alpha amylase
Azure blue dye attached to starch complex sprayed onto paper
Spray paper with iodine working solution
AP reaction
Testing for acid phosphatase
Reagents: sodium a-naphthyl phosphate + brentamine fast blue
Purple colour = +ve
Acid phosphatase hydrolyses a-naphthyl phosphate into sodium phosphate and a-naphthyl
a-naphthyl reacts with brentamine fast blue- purple colour
blood false positives
Plant materials e.g. horseradish
Oxidising agents- cleaning products
semen false positives
Tea-purple
Cauliflower/sprouts-pinky/brown
Batteries-grey
Vaginal secretions-pink