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fitness
the ability to produce viable offspring
adaptation
a heritable trait that is associated with high fitness
theory
an explanation or set of hypotheses that attempt to explain a large and pervasive phenomenon
evolution
a change in the frequencies of alleles in a population over time
genetic drift
any change that occurs in allele frequencies that is due to change
founder events
an event that can cause genetic drift when a relatively small number of individuals disperse to a new habitat and found a completely new population
genetic bottleneck
an event that can causes genetic drift when a species undergoes a large and rapid decrease in population size due to a disease epidemic, catastrophic storm, or other change
gene flow
an evolutionary process that changes allele frequencies through the movement of individuals and their alleles from one population to another - homogenizes allele frequencies among populations
maladaptive
leading to lower fitness
mutation
any change in the base sequence of DNA and thus a change in genetic information - introducing new alleles into population
speciation
the process of genetic isolation and genetic divergence that is responsible for the creation of a new species
species
an evolutionary independent unit in nature - meaning a population or group of populations that is genetically isolated from other and is thus changing under the effects of natural selection, genetic drift, and mutation independently of others
population
a group of individuals from the same geographic region that regularly mate together
fossil record
consists of any trace from an organism that lived in the past
extinction
when a species ceases to exist - there are no living members of a species left
endosymbiosis
when another organism lives inside the cells of another (inside-together-life)
mutualistic
when a relationship has provided fitness benefits for both organisms
adaptive radiation
the rapid diversification of a single lineage into a large number of species (for the purpose of adaptations that will allow the exploitation of different resources and habitats)
niche
the range of resources that a species can use and the range of environmental conditions it can tolerate
morphological innovation
a novel trait that allows individuals to exploit resources in a new way
ecological opportunity
when species thrive in regions with specific resources they are already fit to exploit and the ability to fill particular niches
alga (algae)
any photosynthetic organism that lives in an aquatic environment
protist
any eukaryote that is not a fungus, animal, or land plant
plasmid
a small, extrachromosomal loop of DNA
peptidoglycan
a structural carbohydrate found in bacterial cell walls - a lattice made of sugars linked with glycosidic bonds that have short chains of peptide-bonded amino acids protruding from them
prokaryote
bacteria and archaea - organisms whose cells lack a nucleus
microbe
viruses and any microscopic organism - including bacterial, Archaean, and eukaryotic species
primary producer
an organism that produces its own food, usually via photosynthesis
microbiome
the collection of microbes that lives in a particular location
phylogenetic tree
a graphical depiction of evolutionary history or phylogeny
homologous traits
any characteristics, ranging from a single nucleotide in DNA to body parts, that is observed in multiple species and inherited from the same common ancestor
root
the base of a tree, indicating the common ancestor of all the taxa indicated at the tips
node
a split where a speciation event occurs, so one species splits into two
branch
a species or other group changing through time
tip
the end of a branch, representing a taxon
taxon (taxa)
a named group of organisms
monophyletic group
an ancestor and all of its descendants
synapomorphy
a trait that one group has no that no one else does - defines monophyletic groups
homoplasy
similarity in traits that is no due to common ancestry but due to independent evolution
outgroup
any lineage that is not part of the monophyletic group that is the focus of a phylogenetic tree
parsimony
any criterion in logic that states the simplest explanation is the most likely to be correct
physiology
the study of systems that allows organisms to fulfill functions such as processing food and waste, reproducing, and defending against disease
proximate causation
explanations that focus on the molecular and cellular mechanisms responsible for a function
ultimate causation
explanations that focus on why structures and processes observed in an organism exist in terms of their evolutionary history and impact on fitness
cell
membrane bound structure that form the most fundamental functional unit of life
tissue
a group of cells that perform a common function within the same structure
organ
two or more tissues that create a structure with specific function