emulsion test - ethanol, shake, water - white milky emulsion
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protein
polypeptide chain of amino acids
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polypeptide bond
peptide
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amino acid
H2NCHRCOOH
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primary structure
sequence of amino acids
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secondary structure
hydrogen bonds - alpha helix, beta pleated sheet
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tertiary structure
hydrogen bonds, ionic bonds, disulfide bridges, dependent on R groups and their positions
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quaternary structure
more than one polypeptide chain
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test for proteins
biuret test - NaOH, copper(II) sulfate - purple
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enzyme
biological catalyst, increases rate of reaction by lowering activation energy
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active site
part of the enzyme where the substrate molecules bind to, specific
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ESC
enzyme substrate complex formed when substrate fits into enzyme’s active site, lowers Ea by holding molecules close (joining) or putting strain on bonds in substrate (splitting)
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lock and key
substrate fits into enzyme perfectly
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induced fit
substrate binds, active site changes shape slightly to make it more complimentary
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temperature
higher temperature more kinetic energy substrate more likely to collide with active site, optimum temperature, too low not enough energy, too high denatured active site no longer specific
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pH
optimum pH specific to enzyme, too low or too high denatures active site
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substrate concentration
higher concentration more ESCs higher rate of reaction, however active sites saturated at a certain point so rate plateaus
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enzyme concentration
higher concentration more ESCs higher rate of reaction, rate plateaus if substrate limited
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competitive inhibitors
similar shape to substrate, bind to active site, prevent ESC
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non-competitive inhibitor
bind to surface of enzyme, change tertiary structure and shape of active site, prevents ESC
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DNA
deoxyribonucleic acid, double helix, ATCG, long
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RNA
ribonucleic acid, single strand, AUCG, short
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nucleotide
DNA & RNA monomer, phosphate, ribose and base, complimentary base pairing
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DNA/RNA bond
phosphodiester
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DNA replication
semi-conservative - DNA helicase breaks hydrogen bonds between strands, each strand act as a template for complimentary base pairing, DNA polymerase join nucleotides phosphodiester bond, one old one new strand
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ATP
adenosine triphosphate - adenine, ribose and 3 phosphate groups, hydrolysed into ADP and inorganic phosphate releasing a lot of energy
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phosphorylation
inorganic phosphate makes compound more reactive
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water
metabolite, solvent, hydrogen bonding, cohesive, high latent heat of vaporisation, high specific heat capacity
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inorganic ions
specific roles - FE2+ haemoglobin, H+ pH, Na+ cotransport and action potentials, PO43- DNA/RNA/ATP phosphorylation and cell membranes