Animal Nutrition Exam 1 - Protein Nutrition

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Last updated 1:48 AM on 2/8/26
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112 Terms

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Proteins

What is the most abundant biological macromolecule?

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Protein

_____ are the most abundant biological macromolecules. Present in all cells and all parts of cells.

  • Great variety, ranging in size and biological diversity

  • Name is derived from the Greek language, “proto” meaning FIRST

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expensive

Protein is often the most ____ dietary ingredient → therefore it is socially and economically important

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Amino Acids

______ = The “Building Blocks” of Protein

<p>______ = The “<strong>Building Blocks</strong>” of <span style="color: red;"><strong>Protein </strong></span></p>
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Stereoisomers

Amino Acid Structure

  • ______ (Isomeric Molecules)

    • Groups of isomers in which the atoms are linked in the same order but differ in spatial arrangement.

<p><strong><u>Amino Acid Structure </u></strong></p><ul><li><p>______ (Isomeric Molecules)</p><ul><li><p>Groups of <strong>isomers </strong>in which the atoms <strong>are linked in the same order but differ in spatial arrangement</strong>. </p></li></ul></li></ul><p></p>
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L-Form

Enantiomers are Mirror Images. When we synthesize proteins you get L and D forms of Amino Acids, which one is present/use in biological proteins?

<p><strong>Enantiomers </strong>are <strong>Mirror Images</strong>. When we synthesize proteins you get <span style="color: red;"><strong>L and D forms of Amino Acids</strong></span>, which one is present/use in biological proteins? </p>
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L-Amino Acids

L vs D Amino Acids

______

  • Most abundant form of amino acids and is found in all proteins in plants and animals

<p><strong><u>L vs D Amino Acids</u></strong> </p><p>______</p><ul><li><p><span style="color: green;"><strong>Most abundant form of amino acids</strong></span> and is found in all proteins in <strong>plants </strong>and <strong>animals </strong></p></li></ul><p></p>
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D-Amino Acids

L vs D Amino Acids

______

  • Amino Acids that are not commonly seen in animal or plant protein.

  • May come from microbial populationare of microbial origin (produced during microbial protein synthesis in the GIT)

<p><strong><u>L vs D Amino Acids </u></strong></p><p>______</p><ul><li><p>Amino Acids that <span style="color: red;"><strong>are not commonly seen in animal or plant protein. </strong></span></p></li><li><p>May come from <strong>microbial population</strong> → <strong>are of microbial origin</strong> (produced during <span style="color: green;"><strong>microbial protein synthesis in the GIT</strong></span>) </p></li></ul><p></p>
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Hydrophobic

Chemical Characteristics of Amino Acids

  1. _____

  • Nonpolar, aliphatic R groups

  • Aromatic R groups

<p><strong><u>Chemical Characteristics of Amino Acids</u></strong></p><ol><li><p>_____</p></li></ol><ul><li><p>Nonpolar, aliphatic R groups</p></li><li><p>Aromatic R groups </p></li></ul><p></p>
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Hyrdrophilic

Chemical Characteristics of Amino Acids

  1. _____

  • Polar, uncharged R groups

<p><strong><u>Chemical Characteristics of Amino Acids </u></strong></p><ol start="2"><li><p>_____</p></li></ol><ul><li><p>Polar, uncharged R groups </p></li></ul><p></p>
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Very Hydrophilic

Chemical Characteristics of Amino Acids

  1. ______

  • Positively & Negatively charged R groups

<p><strong><u>Chemical Characteristics of Amino Acids </u></strong></p><ol start="3"><li><p>______</p></li></ol><ul><li><p>Positively &amp; Negatively charged R groups </p></li></ul><p></p>
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Chemical Characteristics

Amino acids with similar ______ are more inclined to compete for similar sites of absorption within the small intestine

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Absorption

If you feed similar amino acids in excess they will compete for _____

<p>If you feed <span style="color: purple;"><strong>similar amino acids</strong></span> in excess they will compete for _____</p>
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Biologically

_______ Essential Amino Acids

  • Amino Acids that are required for specific biological pathways to function within the body

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Essential Amino Acids

Biologically Essential Amino Acids Include:

_______

  • Amino Acids that are produced in an inadequate supply in the body. Therefore, they must be supplemented in the diet.

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Nonessential Amino Acids

Biologically Essential Amino Acids Include:

________

  • Amino acids that are produced in adequate amounts by the body.

  • Do not need to consume them

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Quality

Protein ____

  • Determined by a combination of both AA sequence and AA digestibility

  • Type of amino acids present in protein

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Nutritionally Essential

Biologically Essential Amino Acidsall have biological functions in the body: some of them are ________ because the does not produce enough to meet the requirements

<p><strong>Biologically Essential Amino Acids</strong> → <strong><u>all have biological functions in the body:</u></strong> some of them are <span style="color: green;"><strong>________ because the does not produce enough to meet the requirements </strong></span></p>
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Protein Synthesis

Limiting Amino Acids

1st Limiting Amino Acids: amino acid that limits ________

<p><strong><u>Limiting Amino Acids </u></strong></p><p><strong>1st Limiting Amino Acids</strong>: amino acid that limits ________</p>
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Defecient

Limiting Amino Acids

  • Protein synthesis stops

  • Will not grow because some amino acids are ____

<p><strong><u>Limiting Amino Acids </u></strong></p><ul><li><p>Protein synthesis stops </p></li><li><p>Will not grow because some amino acids are ____</p></li></ul><p></p>
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Urine

Limiting Amino Acids

  • Excess Amino Acids: wasted in _____ (high in Nitrogen)

<p><strong><u>Limiting Amino Acids </u></strong></p><ul><li><p><span style="color: purple;"><strong>Excess Amino Acids</strong></span>: wasted in _____ (high in Nitrogen)</p></li></ul><p></p>
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Limiting Amino Acids

______: An amino acid that is first to limit protein synthesis. It varies among species, physiological stage, and dietary conditions.

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Amino Acids

Animals have specific requirements for _____, not proteins

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Primary Structure

Protein Structures

<p>Protein Structures </p>
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Secondary Structure

Protein Structures

<p>Protein Structures </p>
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Tertiary Structure

Protein Strcutures

<p>Protein Strcutures </p>
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Quaternary Structure

Protein Structures

<p>Protein Structures </p>
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Configuration

Modification of Protein

*Changing the ______of proteins

  • Denature by heat: ex → egg yolks turning from clear to white

  • Changing the chemical properties of the protein

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<p>Review</p>

Review

Review

  • It is remarkable how much protein is being produced everyday

<p>Review </p><ul><li><p>It is remarkable how much protein is being produced everyday </p></li></ul><p></p>
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Crude Protein (CP)

_______

  • A crude way to estimate protein content of a material based on Nitrogen alone.

  • Nitrogen only comes for protein.

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Nitrogen

Crude Protein

An estimation of protein within a sample based on _____ content

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6.25

Crude Protein = Nitrogen content x _____

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Crude Protein

Most proteins contain 16% nitrogen. Therefore if you multiply the N content by 6.25 you will get the ____ value.

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<p>Review </p>

Review

Review

<p>Review </p>
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<p>Review</p>

Review

Review

*Tip: If given a specific N content of a specific protein in a sample, you will more than likely be required to calculate the actual conversion factor of said protein

<p>Review </p><p>*Tip: If given a<strong> specific N content</strong> of a <strong>specific protein</strong> in a sample, you will more than likely <strong>be required to calculate the actual conversion factor of said protein</strong></p>
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Protein

Crude Protein is not 100% accurate because not all proteins have the same Nitrogen content. In addition to this, there are also components that have Nitrogen but are not ____ (ex. NPN)

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Amino Acids → want to know exact amino acid profile and quantity

  • Different amino acids have different internal concentrations of amino acids

If you wanted a better entity (term) to describe protein content over Crude Protein, what would it be?

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Diets

Crude Protein is not 100% accurate

  • However….

    • CP is simple to calculate

    • CP is widely used

  • Easy to compare _____, even though you really don’t know the amino acid composition

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Non Protein Nitrogen (NPN)

_______ is the portion of nitrogen within a sample that does not come from protein

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Urea

For milk, urine, and livestock feed ____ is the most abundant component of Non Protein Nitrogen

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Urea

_____

  • Found in fertilizer

  • Found in urine (main source of the excertion of Nitrogen)

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Nitrogen

  • Dog urine contains urea with too much ____ for the grass → Kills the grass but fertilizes the soil around it (causing grass to grow)

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Protein

Nonprotein Nitrogen (NPN)

  • However, it is important to recognize that other molecules such as free amino acids, peptides, nitrate, amides, creatine and creatinine can be present (ARE NOT ______)

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Mitochondria - Urea Cycle

Where in the body do we make urea?

<p><strong>Where in the body do we make urea?</strong></p>
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Body

You cannot feed urea to dairy cows although it is produced in the ____

<p><span style="color: red;"><strong>You cannot feed urea </strong></span>to dairy cows although it is produced in the ____</p>
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Rumen

Urea Utilization

  • Urea is degraded in the ____ by microbial urease (enzyme) forming NH3 (ammonia) and CO2 (carbon dioxide)

<p><strong><u>Urea Utilization </u></strong></p><ul><li><p>Urea is <span style="color: red;"><strong>degraded </strong></span>in the ____ by <strong>microbial urease (enzyme) </strong>forming <strong>NH3 </strong>(ammonia) and <strong>CO2 </strong>(carbon dioxide) </p></li></ul><p></p>
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Rumen

Where is urea degraded?

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Urease

What microbial enzyme degrades urea forming NH3 and CO2?

<p>What <strong>microbial enzyme</strong> degrades urea forming <strong>NH3 </strong>and <strong>CO2</strong>? </p>
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Amino Acids

Urea Utilization

  • Microbial populations within the rumen then utilize NH3 (ammonia) to synthesize microbial _____

<p><strong><u>Urea Utilization </u></strong></p><ul><li><p><span style="color: purple;"><strong>Microbial populations within the rumen</strong></span> then utilize <strong>NH3 </strong>(<strong>ammonia</strong>) to synthesize microbial _____ </p></li></ul><p></p>
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NH3

High vs. Low Nitrogen Intake

  • Within ruminants, increased intake of Nitrogen from the feed with result in an increased concentration of ____ being absorbed through the rumen epithelium

<p><strong><u>High vs. Low Nitrogen Intake </u></strong></p><ul><li><p>Within ruminants, <span style="color: purple;"><strong>increased intake of Nitrogen from the feed </strong></span>with result in an<strong> increased concentration of ____ being absorbed through the rumen epithelium </strong></p></li></ul><p></p>
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Flow

High vs. Low Nitrogen Intake

  • As you increase Nitrogen intake, the size of the pools (except the urine) does not change. Instead, the ___ of Nitrogen throughout various organs changes

  • This is seen in changes in the amount of urine produced and excreted

Ex: the amount of nitrogen in the feces doesn’t change that much

<p><strong><u>High vs. Low Nitrogen Intake </u></strong></p><ul><li><p>As you <span style="color: red;"><strong>increase Nitrogen intake</strong></span>, <strong><mark data-color="red" style="background-color: red; color: inherit;">the size of the pools (except the urine) does not change</mark></strong>. <mark data-color="yellow" style="background-color: yellow; color: inherit;">Instead, the ___ of Nitrogen throughout various organs changes</mark></p></li><li><p><strong><mark data-color="yellow" style="background-color: yellow; color: inherit;">This is seen in changes in the amount of urine produced and excreted </mark></strong></p></li></ul><p>Ex: the amount of nitrogen in the feces doesn’t change that much </p>
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Protein

Young animals require more ____ because they are still growing

<p><strong>Young animals require more ____ because they are still growing </strong></p>
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Urea

Older animals no longer require growth, thus if you overfeed (such as feeding puppy food) protein, the flow of _____increases and puts strain on the liver and kidneys

  • The liver produces urea

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Urea

What organ produces urea?

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Ammonia

Urea is a normal component of bodily fluids and is not toxic. However, ____ is, especially in high concentrations

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Nonruminants

You should not feed urea to _______

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Urea

Microbes can use ____ to make microbial amino acids

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Blood pH

Under the circumstances that no organic acids are available, which can be seen in low starch diets NH3 builds up in the blood → This causes an increase in ____ which can result in death if not treated. (need to aclimate animals when feeding urea)

  • Ammonia (pH = 9)

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Consume

You want to make NOT ____ urea if you are not a ruminant

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Small Amounts

Urea Toxicity

  • Horses, pigs, and other monogastrics can tolerate ______ of urea

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Crude Protein

Urea Toxicity

  • Cattle can tolerate up to ~25% of their _____ as urea (~1/2% urea in the total diet), all essential amino acids can be formed in the rumen if sulfur, phosphorus, and iron are present.

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Symptoms

Urea Toxicity

_____ of Toxicity

  • Convulsions, Excess salivation, and death → Means ammonia is already in the blood

<p><strong><u>Urea Toxicity </u></strong></p><p><strong>_____ of Toxicity </strong></p><ul><li><p><strong>Convulsions</strong>, <strong>Excess salivation</strong>, and <span style="color: red;"><strong>death </strong></span>→ Means ammonia is already in the blood </p></li></ul><p></p>
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Acid Infusion

Urea Toxicity

  • What to do if toxicity symptoms appear?

    • _______ (50% vinegar solution) to prevent ammonia absorption

      • Acidifies the rumen and converts NH3 to NH4+ → slower absorption through rumen wall trapping NItrogen in Rumen thus slowing the amount of NH3 reaching the bloodstream

<p><strong><u>Urea Toxicity </u></strong></p><ul><li><p><strong>What to do if toxicity symptoms appear? </strong></p><ul><li><p><strong><mark data-color="red" style="background-color: red; color: inherit;">_______ (50% vinegar solution) to prevent ammonia absorption </mark></strong></p><ul><li><p><mark data-color="yellow" style="background-color: yellow; color: inherit;">Acidifies the rumen and converts NH3 to NH4+ → slower absorption through rumen wall trapping NItrogen in Rumen thus slowing the amount of NH3 reaching the bloodstream </mark></p></li></ul></li></ul></li></ul><p></p>
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Urease

Urea Toxicity

  • What to do if toxicity symptoms appear?

    • Cold water also reduces ____ activity → enzyme that breaks down urea into ammonia, reducing ammonia concentration

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Protein Digestibility

_________: The amount of protein that can be converted into a form that can be absorbed by an animal

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Rumen Undegraded Protein (RUP)

____________: Dietary protein fraction that is not degraded in the rumen. (escape vs. bypass protein)

  • The more the animal eats the greater this fraction.

  • Protein from diet not degraded in the rumen, micobes will not have access to it as microbes are in the rumen

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Rumen Degraded Protein (RDP)

____________: Dietary fraction that is degraded in the rumen.

  • We want this unless we are feeding TOP NOTCH proteins → as we want specific amino acids and not microbial amino acids

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In Situ

RDP and RUP Measurements

  • _______

    • Live animals experiments with cannulated animals. Mobile bag technique → put food in tea bag, put inside animal

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In Vitro

RDP and RUP Measurements

  • ______ (in the glass)

    • Experimental laboratorial approaches

<p><strong><u>RDP and RUP Measurements </u></strong></p><ul><li><p>______ (in the glass) </p><ul><li><p>Experimental <strong>laboratorial </strong>approaches </p></li></ul></li></ul><p></p>
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Computer Models

RDP and RUP Measurements

  • ______

    • Combination of all experimental approaches (combines data from multiple experiments)

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In Vivo

RDP and RUP Measurements

  • ______ (live animals) THE BEST***

    • Live animal experiments with cannulated animals

      • takes a long time

      • Very expensive

      • Labor intensive

      • Large number of animals

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Degraded

In Situ Limitations

  • Assumes that proteins, peptiles and AA in the soluble fraction are completely _______

    • Leaving the bag does not inherently mean it was degraded could just be soluble

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Physical Restrictions

In Situ Limitations

  • Reduced access to feed by the microbial populations due to __________ imposed by the use of mobile bags

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Contamination

In Situ Limitations

  • Imprecise quantification of microbial contamination of the undigested residues

    • Presence of microbes within the bag itself, ____ of sample.

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Liquids

____ go faster through the GI tract

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Protein Solubility

  • _________

    • How well a particular protein mixes with water in the rumen

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Protein Degradability

  • _______

    • How much of particular protein is broken down in the rumen.

      • Urea is immediately degraded

      • Strach is degraded slowly to provide more energy for a longer period of time → it eventually becomes sugar in tthe blood (longer lasting energy slower degradable)

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Soybean Meal

What is the most common protein source in the United States?

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For HIGH PRODUCING ANIMALS

  • Slow digestion to stay longer in the GI tract, more opportunities for it to be digested.

TQ: When would you want something to be highly degradable but not highly soluble?

  • The more soluble, the quicker it passes through the GI tract

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<p>Review </p>

Review

Review

<p>Review </p>
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Passage Rate

Factors Affecting Protein Digestion

  • _____

    • Inversely related to retention time. goes fast through the GI tract → less digested (not as much time for the enzymes)

    • With increased Kp overall digestibility will decrease → Retention time is slower if you eat too much : will pass through your body faster

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Diet

Factors Affecting Protein Digestion

  • _____(Forage vs. Grain)

    • Grains help improve microbes allowing the animal to better digest cellulose

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Less

**The more you consume the ___ chance for digestion as it leads to a lower retention time and faster passage rate

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Synchronization

Factors Affecting Protein Digestion

  • Carbohydrate and Nitrogen _______

    • Necessary to provide microbes with necessary energy source to digest protein

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Dry Matter Intake

Factors Affecting Protein Digestion

  • _______ Intake (DMI)

    • Increase in DMI leads to a decrease in overall digestibility

    • Increased consumption → decreased digestibility

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Diet Processing

Factors Affecting Protein Digestion

  • ________

    • Examples:

      • Maillard Reaction

      • Tannins

      • Formaldehyde

      • Acid Treatment

      • Rumen Protected Amino Acids

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Maillard Reaction

Diet Processing

_________ (Browning Reacting) → Toast, Heat Reaction

  • Named after French chemist Louis-Camille Maillard, in 1912 while attempting to reproduce biological protein synthesis. The reactive carboxyl group of the carbohydrates reacts with the nucelophilic amino group of AA, and forms a complex mixture of molecules responsible for a range of odors and flavors.

<p><strong><u>Diet Processing </u></strong></p><p>_________ <mark data-color="purple" style="background-color: purple; color: inherit;">(Browning Reacting) → Toast, Heat Reaction </mark></p><ul><li><p>Named after French chemist Louis-Camille Maillard, in 1912 while attempting to reproduce biological protein synthesis.<strong> The reactive carboxyl group of the carbohydrates reacts with the nucelophilic amino group of AA, and forms a complex mixture of molecules responsible for a range of odors and flavors. </strong></p></li></ul><p></p>
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Tannins

Diet Processing

______ (Reduce Digestibility)

  • Polyohenolic compounds that bind and precipitate proteins and AA.

  • Hydroxyls and carboxyls groups form strong bonds with proteins and AA

  • Combined with plants that are usually highly degradable in the rumen → protects protein

  • Binds with proteins and makes proteins less digestible

<p><strong>Diet Processing </strong></p><p>______ (Reduce Digestibility)</p><ul><li><p><strong>Polyohenolic compounds that bind and precipitate proteins and AA. </strong></p></li><li><p><strong>Hydroxyls and carboxyls groups form strong bonds with proteins and AA</strong></p></li><li><p><mark data-color="purple" style="background-color: purple; color: inherit;">Combined with plants that are usually highly degradable in the rumen → protects protein </mark></p></li><li><p><span style="color: red;"><mark data-color="purple" style="background-color: purple; color: inherit;">Binds with proteins and makes proteins less digestible </mark></span></p></li></ul><p></p>
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Formaldehyde

Diet Processing

___________ (add in tiny amounts to preserve cells)

  • preserves tissues or cells by cross linking primary amino groups in proteins with other nearby nitrogen atoms in protein ot DNA through alpha CH2 linkages.

<p><strong>Diet Processing </strong></p><p>___________ (add in tiny amounts to preserve cells)</p><ul><li><p><strong><mark data-color="red" style="background-color: red; color: inherit;">preserves tissues or cells by cross linking primary amino groups in proteins with other nearby nitrogen atoms in protein ot DNA through alpha CH2 linkages. </mark></strong></p></li></ul><p></p>
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Acid Treatment

Diet Processing

______

  • Variety of reactions that denature (structural change) protein

    • Citric acid: common additive to food

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Protected Amino Acids

Diet Processing

________

  • pH, temperature, or physical sensitive

  • Protection of AA from microbial attacks to ensure the essential Amino Acids are absorbed in the small intestine

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Trypsin Inhibitors

Diet Processing

__________(Reduces digestibility)

  • Decrease the activity of protein hydrolyzing enzymes in the small intestine (trypsin and chymotrypsin)

  • Decreases protein digestibility

  • Heat treat will also destroy inhibitors (this is why we feed roasted soybeans to destroy inhibitors)

  • Commonly found in soybean protein

<p><strong>Diet Processing </strong></p><p>__________(Reduces digestibility)</p><ul><li><p><span style="color: red;"><strong>Decrease the activity of protein hydrolyzing enzymes in the small intestine (trypsin and chymotrypsin)</strong></span></p></li><li><p><strong>Decreases protein digestibility</strong></p></li><li><p><strong><mark data-color="red" style="background-color: red; color: inherit;">Heat treat will also destroy inhibitors (this is why we feed roasted soybeans to destroy inhibitors)</mark></strong></p></li><li><p><strong>Commonly found in soybean protein </strong></p></li></ul><p></p>
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Trypsin

Enzyme is small intestine that digests protein

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Stomach

Protein Digestion

  1. No chemical digestion takes place in the mouth, it begins in the _______

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Pepsin

Protein Digestion (Stomach)

  1. Monogastrics: Hydrochloric acid denatures protein and also converts pepsinogen (produced in walls of the stomach) to _____

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Peptides

Protein Digestion

  1. Pepsin breaks the protein down into ____ of various lengths and some amino acids

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  • Trypsinogen

  • Chymotrypsinogen

Protein Digestion

  1. In response to a drop in pH (due to release of HCl in the stomach), the pancreas makes ______ and ______ (zymogen)

  • This signals that the protein has arrived within the small intestine

<p><strong>Protein Digestion </strong></p><ol><li><p>In <span style="color: red;"><strong>response to a drop in pH </strong></span><strong>(due to release of HCl in the stomach), the pancreas makes ______ and ______ (zymogen)</strong></p></li></ol><ul><li><p><span style="color: blue;">This signals that the protein has arrived within the<strong> small intestine </strong></span></p></li></ul><p></p>
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Small Intestine

Protein Digestion

  1. These zymogens will be activiated (by some form of cleavage) and be secreted into the _________ in the for of trypsin and chymotrypsin

<p><strong>Protein Digestion </strong></p><ol start="2"><li><p><strong>These zymogens will be activiated (by some form of cleavage) and be secreted into the _________ in the for of </strong><span style="color: blue;"><strong>trypsin </strong></span><strong>and </strong><span style="color: blue;"><strong>chymotrypsin </strong></span></p></li></ol><p></p>
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Peptides

Protein Digestion

  1. These proteases break down polypeptides into smaller ______ (very few peptides have to be broken down at this stage)

<p><strong>Protein Digestion </strong></p><ol start="3"><li><p>These proteases <strong>break down polypeptides into smaller ______ (very few peptides have to be broken down at this stage) </strong></p></li></ol><p></p>
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Small Intestine

What is the main site of digestion and absorption?

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