FRSC-4600 Lecture Notes

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80 Terms

1

List the three main components of the course description.

Applied, Molecular, Genetics.

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2

Define heredity in genetics.

The transmission of traits from one generation to the next.

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3

Who documented the discrete heritable units known as genes?

Gregor Mendel.

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4

What is the focus of molecular genetics?

The study of structure and function of genes at the molecular level.

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5

What does applied molecular genetics involve?

Using molecular genetics for research, conservation, management, and law enforcement.

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6

What statistical ratio did Mendel observe when crossing F1 hybrids?

3:1 ratio of purple to white flowers in F2 generation.

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7

What principle explains the law of segregation?

The two alleles for a heritable character separate during gamete formation.

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8

What law did Mendel propose when studying seed color and shape in peas?

Law of independent assortment.

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9

Name a common genetic disorder that follows Mendelian inheritance.

Cystic fibrosis, sickle cell anemia, and Huntington’s disease.

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10

How is DNA structured according to the Watson-Crick model?

DNA strands are antiparallel.

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11

What are the building blocks of DNA?

Nucleotides.

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12

What are SNPs?

Single Nucleotide Polymorphisms.

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13

What is the role of restriction enzymes in genetics?

They recognize specific DNA sequences and cut DNA at those sites.

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14

What is the basis for RFLP analysis?

Hybridizing labeled probes to DNA after separating fragments by size.

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15

Define a haplotype.

A combination of linked alleles inherited together.

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16

What is a technical advantage of using microsatellites as genetic markers?

They are abundant and highly variable.

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17

What is the purpose of eDNA monitoring in species conservation?

To detect species without capturing or seeing them.

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18

What is a significant challenge when using eDNA methods compared to traditional methods?

eDNA is not universally quantitative.

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19

What significant role does SNP play in population genetics?

They are frequently used in association studies.

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20

What is the typical range of detection probability for eDNA compared to traditional methods?

Higher detection probabilities, especially for rare or invasive species.

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21

What does a null allele refer to?

An allele that does not amplify during PCR.

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22

How many mutations are typically introduced to human offspring according to genetic studies?

Approximately 110 mutations.

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23

What is used in high-throughput sequencing to amplify DNA for identification?

Bridge amplification on a solid support.

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24

Define microbiome in forensics.

A community of microorganisms that can provide associative evidence between people and places.

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25

What kind of data does high-throughput sequencing provide that is critical in forensic science?

Detailed pictures of microbial communities.

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26

What are the advantages of using environmental DNA (eDNA) sampling in ecology?

Non-invasive, standardized, and cost-efficient for species identification.

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27

What established act regulates international trade for endangered species?

The Convention on International Trade in Endangered Species (CITES).

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28

How can allele fixation be explained in the context of wildlife conservation?

It indicates genetic uniformity due to a significant reduction in population size.

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29

What are two common non-human models used in human forensic applications?

Cow blood and pig models.

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30

What is the major challenge in tracking rhino poachers using DNA?

Linking the horn to the carcass or tool used in poaching.

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31

Discuss the implications of using machine learning in forensic science.

It can model complex relationships in microbial diversity for crime scene inference.

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32

What is the goal of using machine learning algorithms in forensic investigations involving microbiomes?

To predict likelihoods of associations between suspects and crime scenes based on microbial communities.

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33

What is the concept of 'secondary DNA transfer'?

DNA transferred indirectly from one surface to another.

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34

What is a unique feature of mitochondrial DNA that affects its use in species identification?

It is maternally inherited.

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35

What is a technique used to monitor genetic diversity in wildlife populations?

Microsatellite analysis.

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36

What does the term 'hybridization' refer to in genetics?

The process of combining different varieties of organisms to produce hybrid offspring.

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37

How can NGS technologies transform forensic genetics?

By allowing for high-throughput analysis of genetic markers.

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38

What is the importance of deriving molecular evidence from crime scenes?

It assists in establishing links to suspects through DNA profiling.

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39

What is the basic concept behind the term 'power of inclusion' in forensic statistics?

The probability that a particular DNA profile belongs to a specific individual.

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40

What application has emerged from eDNA analysis in conservation?

Monitoring biodiversity and detecting invasive species.

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41

What can lead to genetic variation in populations?

Mutations, recombination, and random fertilization.

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42

How does soil microbial diversity contribute to forensic investigations?

It serves as trace evidence linking suspects to crime scenes.

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43

Why is it critical for eDNA to maintain quality in forensic studies?

To ensure reliable detection and minimize contamination risk.

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44

Define the significance of the haplotype in genetic studies.

It helps track allele combinations inherited together across generations.

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45

What is the role of bioinformatics in high-throughput sequencing?

To analyze and interpret vast data sets generated from sequencing.

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46

How is the efficiency of eDNA methods proven as superior in certain scenarios?

By demonstrating higher detection rates for cryptic or endangered species.

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47

What type of forensic evidence can be developed from DNA profiling in wildlife investigations?

Identity verification, species identification, and tracking illegal trade.

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48

In genetic disorders, what does the term 'dominant' imply?

That only one copy of the allele is necessary to express the trait.

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49

What molecular tool is crucial for amplifying specific DNA regions in research?

PCR (Polymerase Chain Reaction).

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50

How do environmental conditions impact DNA degradation?

Warmer and more humid conditions accelerate DNA breakdown.

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51

What role does the Convention on International Trade in Endangered Species (CITES) serve?

It sets controls on international trade of endangered species.

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52

In the context of genetic analysis, what are STRs?

Short Tandem Repeats used for DNA profiling.

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53

Explain the relationship between genotype and phenotype.

Genotype refers to the genetic constitution, while phenotype is the observable characteristics.

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54

What is the impact of the agricultural industry on wildlife DNA forensics?

It raises concerns about contaminants influencing species identification.

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55

How does understanding RNA degradation improve forensic analyses?

Identifying RNA decay rates helps establish timelines for biological evidence.

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56

Describe the significance of SNP identification in genetic research.

It allows for the identification of genetic variation responsible for traits.

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57

In forensic cases, how is evidence collected and compared?

Through DNA profiling using reference samples from suspects.

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58

Highlight a disadvantage of eDNA analysis.

It primarily detects presence or absence, lacking information on populations' demographics.

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59

In forensic genetics, what is the purpose of chain termination sequencing?

It allows for the determination of DNA sequences through specialized methods.

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60

What does T-RFLP stand for in soil microbial studies?

Terminal Restriction Fragment Length Polymorphism.

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61

What concept does the 'unifactorial' model of inheritance describe?

Traits determined by a single gene.

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62

Define the significance of using FTA papers in blood sample preservation.

They stabilize and preserve samples for molecular analysis.

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63

Why are microsatellites considered powerful tools in forensic analysis?

Due to their high variability and the ability to provide individual identification.

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64

What contributes to the uniqueness of individual DNA profiles?

The variance in genetic markers such as SNPs and microsatellites.

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65

How does cross-validation improve forensic methods?

It assesses the reliability and accuracy of analytical results.

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66

Explain the ecological impact of using eDNA in monitoring endangered species.

It provides data for effective conservation strategies without invasive sampling.

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67

What is one benefit of using high-throughput sequencing in forensic genetics?

It processes large amounts of data efficiently.

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68

What does the acronym NGS stand for?

Next Generation Sequencing.

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69

Defined by the outcome of statistical analysis, what does PI stand for in genetics?

Probability of Identity.

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70

How does genetic variation result from recombination?

Through the exchange of genetic material during meiosis.

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71

What significance does the 'dispersal ability of species' have in eDNA studies?

It affects the distribution and detection of eDNA in sampled environments.

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72

What method improves detection rates of cryptic species in natural environments?

Use of eDNA analyses.

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73

List one environmental factor that limits eDNA persistence.

UV radiation.

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74

What are the uses of chloroplast DNA sequences in forensic applications?

Species identification and tracing plant origins.

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75

What role does geographical information play in eDNA studies?

It helps identify environmental samples spatially linked to target organisms.

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76

In forensic contexts, how can machine learning enhance evidence analysis?

By predicting potential relationships based on datasets of microbial profiles.

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77

What is one disadvantage of using STR markers in forensic analysis?

They require high-quality samples for reliable results.

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78

What is a main consideration when interpreting DNA profiles in forensic cases?

Contextualizing DNA evidence with surrounding circumstances.

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79

What is the significance of collecting microbiome data from aquatic environments?

It aids in understanding the ecological dynamics and potential implications for biodiversity.

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80

What does the term 'misidentified species' imply in biodiversity studies?

Incorrect classification leading to inaccurate ecological assessments.

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