BIOC 4331 Lecture 17

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Last updated 4:32 PM on 4/6/26
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14 Terms

1
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What is V₀ in enzyme kinetics?

The initial rate/initial velocity of product formation (measured at the start, before significant product builds up).

<p>The<strong> initial rate/initial velocity</strong> of product formation (measured at the start, before significant product builds up).</p>
2
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<p>Why is the step <strong>ES → E + P</strong> treated as <strong>irreversible</strong> in Michaelis–Menten kinetics?</p>

Why is the step ES → E + P treated as irreversible in Michaelis–Menten kinetics?

Measurements are taken under initial velocity conditions, where:

  • [P] ≈ 0 (no product has accumulated yet)

  • The reverse reaction (E + P → ES) is negligible

  • Therefore, ES proceeds forward to form product

<p>Measurements are taken under <strong>initial velocity conditions</strong>, where:</p><ul><li><p><strong>[P] ≈ 0</strong> (no product has accumulated yet)</p></li><li><p>The reverse reaction (<strong>E + P → ES</strong>) is negligible</p></li><li><p>Therefore, ES proceeds forward to form product</p></li></ul><p></p>
3
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<p>What is k<sub>cat</sub>?</p>

What is kcat?

The turnover number: max catalytic activity; # of substrate molecules converted to product per enzyme per unit time at substrate saturating conditions [S].

<p>The <strong>turnover</strong> number: max <strong>catalytic</strong> activity; # of substrate molecules <strong>converted to product per enzyme per unit time</strong> at <strong>substrate</strong> <strong>saturating</strong> <strong>conditions</strong> [S].</p>
4
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<p>What is the relationship between k₂ and k<sub>cat</sub>?</p>

What is the relationship between k₂ and kcat?

k₂ = kcat (used interchangeably).

<p>k₂ = k<sub>cat </sub>(used interchangeably).</p>
5
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<p>What does V<sub>max </sub>represent?</p>

What does Vmax represent?

The maximum velocity achieved at very high (effectively infinite) substrate concentration.

<p>The <strong>maximum velocity </strong>achieved at very high (effectively infinite) substrate concentration.</p>
6
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<p>What is <strong>K<sub>m</sub> </strong>on a Michaelis–Menten plot?</p>

What is Km on a Michaelis–Menten plot?

The Michaelis–Menten (M–M) constant; Km is the [S] where V₀ = 0.5 Vmax

<p>The <strong>Michaelis–Menten (M–M) constant</strong>; <strong>K<sub>m</sub></strong> is the [S] where V₀ = 0.5 Vmax</p>
7
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<p>What does K<sub>m</sub> measure about enzyme–substrate interaction?</p>

What does Km measure about enzyme–substrate interaction?

A measure of affinity: lower Km = tighter substrate binding (higher affinity).

<p>A <strong>measure of affinity</strong>:<strong> lower K<sub>m</sub> = tighter substrate binding (higher affinity)</strong>.</p>
8
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<p>Steady state assumption (what becomes constant?)</p>

Steady state assumption (what becomes constant?)

After a short time, [ES] is effectively constant (steady state), so d[ES]/dt ≈ 0.

<p>After a short time, <strong>[ES] </strong>is effectively constant (<strong>steady state</strong>), so d[ES]/dt ≈ 0.</p>
9
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What does kcat/Km represent physically?

Specificity constant: Equivalent to the rate constant for the reaction between free enzyme and free substrate; a measure of enzyme efficiency.

10
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What’s the diffusion-controlled upper limit for kcat/Km? And what are those enzymes called?

~10⁸–10⁹ M⁻¹ s⁻¹; “Almost perfect catalysts” (diffusion-limited).

11
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Enzymes with kcat/Km near 10⁸–10⁹ M⁻¹ s⁻¹ are called what?

Almost perfect catalysts” (diffusion-limited).

12
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What is a double reciprocal (Lineweaver–Burk) plot?

A plot of 1/V₀ vs 1/[S] that yields a straight line.

<p>A plot of <strong>1/V₀ vs 1/[S]</strong> that yields a <strong>straight</strong> line.</p>
13
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What are the units of kcat?

s⁻¹

14
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What are the units of Km?

Concentration (M), because substrate is reported as a concentration.

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