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virulence factor
any component, product or characteristics that contributes to the ability of a micro-organism to cause disease
virulence factors: structural components -> getting in
· Survival of adverse environment
· Attachment to human structure
· Entry into human body
· Entry into a human cell
· Induce inflammatory response
virulence factors: products -> doing harm
· Toxins
· Enzymes ('-ases')
virulence factors: tricks
-> doing harm (turn off/ hide from defender)
· Kill a cell
· Decreasing normal immune response
· Evading normal immune response
· Latency
gram positive bacteria: lipoteichoic acid
binds to toll like receptors on phagocytes -> they produce cytokines -> mediate inflammation
capsule
interference with complement-mediated phagocytosis
pathogens with capsule
· Streptococcus pneumoniae
· Neisseria meningitis
· Haemophilus influenza B
streptococcus pyogenes
· Primary pathogen
- Transient carrier (throat)
- Cause of disease
· Diagnostics
- Gram positive cocci
- Catalase test
- Beta hemolytic
Local or disseminated infections
· Tonsilitis, otitis media
· Impetigo, erysipelas
· Childbed fever, sepsis, necrotizing fasciitis
Exotoxin-mediated syndromes
· Scarlet fever (NL: roodvonk)
· Streptococcal toxic shock syndrome
Immunological effects
· Acute rheumatic fever
· Acute glomerula-nephritis
Adhesion
Streptolysin
Class of pore-forming exotoxins
Streptokinase (s. pyogenes)
dissolves blood clots (lysis)
Hyaluronidase (s. pyogenes)
spread of infection
C5a peptidase (s. pyogenes)
Inactivates C5a preventing attraction of phagocytes
The M protein of Streptococcus pyogenes:
resists phagocytosis
toxins/ superantigens
· 10% of S. pyogenes
> Erythrogenic toxin -> scarlet fever
> Super antigenic toxin -> toxic shock syndrome
influenza A virus
· Primary pathogen
> Mild disease
> Severe disease
· Increased risk of death in patients with:
> Comorbidity (cardiac, pulmonary, renal)
> Very young or very old age
> Impaired immunity
Hemagglutinin
One of the enzymes found on the surface of the Influenza virus. It is responsible for binding the virus to the cell that is being infected.
Neuraminidase
One of the enzymes found on the surface of the Influenza virus. It promotes the release of progeny viruses from infected cells.
virulence mechanisms (influenza A)
· RNA polymerase: no proofreading
· Mutations are frequent
antigenic drift
Minor change in influenza virus antigens due to gene mutation
antigenic shift
major change in influenza virus antigen due to gene reassortment
human immunodeficiency virus (HIV)
Acquired immunodeficiency syndrome (AIDS) is caused by HIV, which damages the cells in the body's immune system so that the body is unable to fight infection or certain cancers.
reverse transcriptase
An enzyme encoded by some certain viruses (retroviruses) that uses RNA as a template for DNA synthesis.
Integrase
the enzyme responsible for integrating viral DNA into the host cell's DNA
HIV protease
An enzyme that converts immature, noninfectious HIV to its infectious state within the cell
diagnostic test for s. pyogenes
gram stain, blood agar plates
diagnostic test for influenza virus
polymerase chain reaction (PCR), direct immunofluorescence (antigen test)
HIV diagnostic test
PCR, combotest with antigen and antibody detection
Sterile areas of the body
- the inside
- stomach
- deep respiratory tract
- urinary tract
Non-sterile areas of the body
- skin
- ENT
- alimentary tract
commensals
- normally presen t in every person, no symptoms
- harmless unless impaired immune system
opportunistic microorganisms
Would normally not cause disease but do so when immune systems are weakened, suppressed, or deficient.
colonization resistance
presence of bacteria on skin and mucosae -> protects against adherence by other microorganisms
Achieving sterility
· Physical -> barriers: skin and mucosae & airways: ciliar activity, mucus, coughing & urinary tract: voiding, antimicrobial factors
· Chemical -> gastric acid & enzymes (lysozyme in tears)
· Immunological -> keeps the 'inside' sterile
infection
· Structural or functional change caused by:
- Micro-organism or its components or its products
causes of fever
infection, allergy, auto-immune, trauma, thrombosis, infarction, malignancy, overheating, intoxications
Exposure vs Infection
Exposure to micro-organism leads to
Colonization on skin or mucosae
· No symptoms
· Commensal or primary pathogens
· Transiently or permanently
· Competition for food and adhesion sites
Infection
· Often, but not always, symptoms and/ or sings
endogenous source
- Commensals: skin (staphylococcus epidermidis), throat (streptococci, neisseria, candida albicans), bowel (escherichia coli, bacteroides fragilis, clostridium)
- Colonization -> staphylococcus aureus, sterptococcus pyogenes/ pneumonia
- Neisseria meningitidis, haemophilus influenza
exogenous source
- Other person
- Zoonosis
- Vector
- Environment
causes impaired barrier function (literally)
- (surgical, traumatic or burn) wounds
- Insect bites
- Penetration of skin by catheters
- Skin/ mucosal toxicity by cytostatic drugs
microorganims on skin or in mucosal membranes
· Staphylococcus aureus -> skin (col. nose)
· Streptococcus pyogenes -> skin (co. throat)
· Staphylococcus epidermidis -> skin
· Escherichia coli -> bowel
· Bacteroides fragilis -> bowel
· Clostridium sp. -> bowel
· Streptococcal sp. -> throat/ vagina
· Candida albicans -> throat/ vagina
S. epidermidis
the most common cause of foreign body infections due to its ability to produce biofilms (polysaccharide)
catheter / chemo can give blood stream infections
causes of impaired barrier function (functionally)
- Urinary catheter, incomplete emptying of bladder -> Escherichia coli
- Lack of gastric acid -> salmonella spp, Vibrio cholera
- Lack of tears (M. Sjörgen: see auto-immune diseases) -> haemophilus influenzae
- Disturbance of normal airway cleaning -> intubation, abnormal mucus, less ciliary function, less coughing, COPD -> streptococcus pneumoniae
Impaired colonization resistance
Candida stomatitis or esophagitis
commensal or colonizing bacteria, yeasts
pseudomembranous enterocolitis
inflammatory condition of both small and large bowels that results in severe watery diarrhea; also commonly called C. diff. colitis
· Pseudo membrane consists of:
- Mucus
- Numerous granulocytes
causes complement deficiency
· Mainly genetic
- Classical pathway
- Alternative pathway
- MB lectin pathway
- Terminal pathway (MAC)
· Iatrogenic
- Eculizumab (anti-C5 antibodies)
· Not always clinically manifest (redundancy of immune system)
· C2, C3, C4 -> extracellular m.o.
· B, D or MBL
· Component of MAC -> Neisseria meningitidis, invasive Neisseria gonorrhoea -> primary pathogens
Conclusion: 'extracellular' bacteria & Neisseria
Neisseria meningitidis
Lipo-polysaccharide (LPS) -> inflammation +++ -> shock * disseminated intravascular coagulation (DIS)
Hypogammaglobulinemia (causes)
· Congenital
- X-linked a-gammaglobulinemia
- As part of SCID (then also cellular defect)
· Acquired
- Common variable immunodeficiency (~immunoglobulin deficiency)
- B cell malignancies -> chronic lymphatic leukemia, myeloma (M. Kahler)
- Iatrogenic: rituximab (anti-CD20)
hypogammaglobulinemia (organisms)
· Capsulated bacteria like
- Streptococcus pneumoniae
- Neisseria meningitidis
- Haemophilus influenzae
· Campylobacter
· Persistent giardia lamblia
· Persistent enterovirus infections
Conclusion: encapsulated bacteria, campylobacter, giardia and enterovirus
splees disorder (causes)
· Asplenia
- Congenital
- Surgical removal
· Functional asplenia
- Chronic hemolysis syndromes
- Infarction
- Other
spleen disorder (organims)
· Often not symptomatic
· Severe sepsis caused by capsulated bacteria like
- Streptococcus pneumoniae
- Neisseria meningitidis
- Haemophiles influenza
· Severe plasmodium infections (malaria)
Conclusion: sepsis caused by encapsulated bacteria, severe malaria
phagocyte disorder (causes)
· Granulocytopenia
Ø Cytostatic drugs
Ø Immune medicated
- Drug allergy
- Auto-immune mediated
· Granulocyte dysfunction
Ø Chronic granulomatous disease
Ø (chronic glucocorticosteroids)
phagocyte disorder (organims)
same as those associated with defect in barrier function and:
- a-hemolytic streptococci
- asppergillus fumigatus
Granulocytopenia
Necrotizing gingivitis
Aspergillus pneumonia
Conclusion: extracellular bacteria, fungi/ yeasts
Impaired cellular immunity (causes)
· Congenital
Ø SCID
Ø Other (rare) diseases
· Acquired
Ø HIV infection -> less CD4 T cells
Ø Chemotherapy -> less all cell counts
Ø Use of immunosuppressive drugs: T cell function and or counts less
impaired cellular immunity (orgaisms)
Intracellular bacteria
- Salmonella species
- Legionella pneumophila
- Mycobacterium tuberculosis
(herpes) viruses
- CMV, EBV, HSV, VZV
Parasites
- Toxoplasma gondii
- Strongyloides stercoralis (hyperinfection)
Pneumocystis jirovecci -> common as first manifestation of HIV infection whem CD4 < 200
Conclusion: intracellular bacteria/ viruses/ fungi, toxoplasma, strongyloides
suppurative/ (purulent) acute inflammation
bacteria gram +/-
mononuclear/ granulomatous inflammation
mycobacteria, spirochetes, parasites, virus
Cytopathic-Cytoproliferative inflammation
HSV, adenovirus, herpes virus, HPV
chronic inflammation and scarring
hepatitis B
tissue necrosis
clostridium, hepatitis B
no reaction
immune deficient host
empyema
pus in the pleural cavity
Listeria monocytogenes
small gram-positive, non-spore-forming rod is a facultative intracellular parasite that grows in the cold and is associated with unpasteurized milk products
Vibrio cholerae
· Exposure -> drinking water or eating food that is contaminated
· Colonization
· Toxin mediated disease
· Transmission -> passed trough feces
· Prevention -> hygiene
adenylate cyclase
converts ATP to cAMP
Taenia species
Taenia saginata
Taenia solium
Varicella Zoster Virus
chicken pox and shingles
primal infection and reactivation
-> Also a primo-infection or reactivation if you have no T cells (+ CNS, eye, liver)
legionella
· Legionella pneumophila
· Geographical distribution
· Exposure -> inhalation of contaminated aerosols produces in conjunction with water sprays or mists or contaminated water sources
· Pathogenesis:
- Intracellular survival
- T cell immunity!
· Transmission -> cannot go from person to person
· Prevention -> keep the water at a temperature that prevents growth and check regularly
Pontiac fever
Mild flu-like syndrome caused by legionella pneumophilla
treponema pallidum
Syphilis
· Geographical distribution
· Exposure -> sexual contact with an infected individual
· Pathogenesis
· Transmission -> sexual contact with an infected individual
· Prevention -> protected sex
schistosoma
- Schistosoma species
- Geographical distribution
- Exposure -> water in the tropics
- Pathogenesis
- Transmission -> trough snails
- Prevention -> don't swim in water in the tropics
Borrelia burgdorferi
causative agent of lyme disease
stage I: erythema migrans
Stage II: meningitis, arthritis, carditis
Stage III: neuro(psycho)logical, skin (ACA)
microorgansims that can cause pneumonia
- influenza virus
- RSV
- s. pneumonia
- mycoplasma
- m. tuberculosis
- legionella
- aspergillus
- worms
Entamoeba histolytica
causes amoebic dysentery
liver abscess + inflammatory changes caecum
fever without tenderness liver
metronidazol or tinidazol
echinococcosis granulosis
* complaints because of cyst expansion
Typical findings on imaging reflecting cyst structure
Complicated cysts require surgical treatment
Combination therapy in case of (expected) spill
Gram stain
A method for the differential staining of bacteria that involves fixing the bacterial cells to a slide and staining with crystal violet and iodine, then washing with alcohol, and counterstaining with safranin. Results in gram-positive bacteria retaining the purple dye and gram-negative organisms having it decolorized so that the red counterstain shows up.
staining mycobacteria (tuberculosis)
- ziehl neelsen stain
- Auramine stain
Giemsa stain
Chlamydia, Borrelia, Rickettsia, Trypanosomes, Plasmodium
Rapid antigen test
an immunologic test in which antigens are detected in a patient specimen by visualizing an Ag-Ab complex
- lower sensitivity
- highest load are most significant
bacterial culture
* time dependent
* specimen quality is important
- further analysis required
- some bacteria and many viruses cannot be cultured
MALDI-TOF mass spectrometry
matrix assisted laser desorption ionization time of flight mass spectrometry
PCR (polymerase chain reaction)
technique that allows molecular biologists to make many copies of a particular gene
- nucleic acid amplification
Serology
The study of reactions between antibodies and antigens
IgM -> recent infection
IgG -> past infection
ELISA test
enzyme-linked immunosorbent assay
complement fixation
activation of the classical complement pathway can result in the specific rupturing of cells and some viruses
haemophilus influenzae
gram negative rods
- encapsulated
- if causes recurrent pneumonia: B cell deficiency ?
good syndrome
Immune deficiency associated with thymoma
· Hypogammaglobulinemia
· Low or absent B-cells
· CD4-penia
· Immune deficiency can become manifest after thymectomy
treatmet hypogammablobulinemia
azithromycin / amoxicillin
Case 1
18 jaar, man, bloody diarrhea, india trip, cysten gezien
1 protozoa: entamoeba histolitica (dyspar geeft geen klachten)
2 cytotoxine, overleving cysten buiten mens, resistentie tegen maagzuur, vermogen om aan darmslijmvlies te hechten
3 geen, iedereen kan het krijgen
4 infasief -> valt darmcellen aan -> bloed gaat eruit ; komt via poortader in lever terecht
5 serologie 's onderzoek, directe diagnostiek op ontlasting
6 metronidazole + paramonisine (tegen de cysten)
Kan het krijgen door fecaal verontreinigd eten/ water
Case 2
A 44-y-old woman is treated with prednisone for systemic lupus erythematodes (auto-immune disease) since two years. In the past she has had a cold sore (fever blister) a few times but during the past two years she has more frequent attacks. During the past six months it occurred five times. It always starts with a tingling feeling, followed by painful vesicles on the left upper lip which makes eating difficult. It takes almost two weeks before the lesions heal. During the last episodes the lesions extended up to her nostril.
1 Which microorganism caused the disease?
Virus, herpes simplex type 1 (type 2 is de soa)
2 Which virulence mechanisms played a crucial role?
(Capsid), infectie slijmvliezen, virus blijft latent in ganglion cellen aanwezig
3 Which host defenses failed?
Cytotoxic T cells, NK cells (t cell immuniteit, chemo, langdurig op IC, HIV, stress/ zonlicht (gezonde mensen))
4 What mechanisms caused the clinical signs and symptoms of the disease?
No capsule -> virus mediated endocytose -> making copies -> exit by lysis
Via zenuwstelsel -> naar huid ->
Reactive van immuun system -> schade aan cellen
5 Which (additional) diagnostic test(s) are indicated, if any?
PCR/ serology
Kweek -> als het vaak terugkomt -> resistentie ?
6 Is antimicrobial therapy indicated and, if yes, what would be a rational choice?
Valaciclovir (alleen bij mensen met verminderde afweer), profilacs
HPS -> reactiveert, tintelingen , impetigo niet
Casus 3
Zwelling op rug
1 stapholococcus aureus
2 alfa toxines -> maken gaten in neutrofielen; peptidoglycaan in celwand -> enorme inflammatoire reactie; protein a als belemmering voor opzonisatie, coagulase -> vertraagt migratie van granulocyten
3 granulocyten/ macrofagen; geen falen nodig iedereen kan er ziek van worden
4 haarklier talgklier
Toxine -> roodheid,
Pus: witte bloedcellen, dood weefsel, bacterie
5 resistentie uitsluiten (als je uit het buitenland komt) met kweek , ook van bloed als er ook koorts is
6 Flucloxacillin (voor patiënten met kunstmateriaal, of als het zich bevindt in het gelaat)
casus 4 54 jaar, plekjes in de mond, recente antibiotica kuur
1 candida albicans (80% van de mensen heeft het)
2 geen virulent organisme want iedereen heeft het
Pseudohypea -> vasthechten aan mondslijmvlies -> mogelijk pijn
3 kolonisatie resistentie
4 pseudohypae -> zorgt voor invasie -> witte slag en soms ulcera met eventueel pijn
5 uitstrijkje van witte uitslag bij twijfel of als het niet opknapt met de therapie
6 Fluconazole (kleinste spectrum)
Casus 5
4 jaar oud, hoge koorts, wisselend bewustzijn, nekstijfheid, petechiae, gram negatieve diplococci
1 Neisseria meningitis
2 lipopolysacharidden (LPS) -> schade zenuwcellen + enorme inflammatie respons
Pili -> hechten aan nasopharynxepitheel
Kapsel -> phagocytose weerstaan
Kan zich binden aan ijzer
3 hoeft niet, maar als complement deficiëntie, geen milt, immunoglobuline verhoogde kans
4 LPS -> veel inflammatie
5 wel bevestigen zodat je gerichter kan behandelen, kweek liquor/ bloed, PCR
6 meteen: hoge dosering penicilline + steroiden om inflammatoire respons te drukken (als je het nog niet zeker weet)
Casus 6
57, turks, bovenbuikklachten, pijn bij palpatie lever, lab normaal, echo, 15 cm cyste
1 echinococcus granulosis -> cyste + gebrek aan andere symptomen
2 cyste vorming -> overleven in darm en daar hechten -> via vena porta naar lever
3 kan bij iedereen voorkomen
4 cyste -> rek op kapsel van lever (kan pijn in rechterschouder geven) + druk op galwegen
Als ie kapot gaat -> door lichaam verspreiden -> anifilaxie
5 bloedonderzoek -> serologie
Cyste opsturen naar lab (ontlasting onderzoek niet zinvol)
6 ja, heel groot dus gevaarlijk, kan openscheuren
Albendazol + operatie (PEAR techniek)
Casus 7
62, man, wond met tinteling + pijnlijke spierspasmen
1. Clostrini tetanus
2. Sporen vormt
Toxine werkt op neurotransmitter
3. Iedereen kan het krijgen, vaccinatie beschermt, ouderen kunnen niet gevaccineerd zijn
Vaccinatie of niet maakt verschil voor behandeling
4. Toxine -> verliest inhibitie -> spasmes door continue prikkel
Specifiek = kaakklem
5. Klinisch beeld, liquor (gevaarlijk)
6. Verpleegarm verplegen -> weinig prikkels
Soort immunoglobuline (als de persoon niet gevaccineerd is)
Belangrijk = preventie
Beta-lactam and glycopeptides
· Cell wall: inhibition of peptidoglycan synthesis (periplasmatic space)
· Competitive inhibition penicillin binding protein
· Ongoing autolysis bacterial wall
penicillin
kills susceptible bacteria by specifically inhibiting the transpeptidase that catalyzes the final step in cell wall biosynthesis, the cross-linking of peptidoglycan
Inhibitors of cell wall synthesis
Penicillins
· Penicillin G
· Flucloxacillin
· Amoxicillin
· Amoxicillin + clavulanic acid
Cephalosporins -> beta lactam antibiotics
· Cefuroxime
· Many others
Glycopeptides
· Vancomyin
inhibiton of DNA synthesis
· Quinolones (ciprofloxacin)
· Metronidazole
inhibitors of ribosomes
- aminoglycosides
- macrolides
- tetracyclins
- clindamycine
Bacteriostatic
inhibits growth of bacteria
(macrolides, tetracyclins)
- Often sufficient
- Even preferred if exotoxin is major virulence factor
Bactericidal
kills bacteria
(betalactam, aminoglycoside, chinolone)
- Infection blood stream: sepsis, endocarditis
- Sites outside reach of immune system: CNS
- Lack of immune cells: granulocytopenia