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factors that determines effect of mutation
size - larger the mutation more significant effects
position - occurs either in genes or regions in genomes not used for coding - if in genes can result in change in protein synthesis
synonymous mutation
change of one nucleotide to another within a codon that doesn’t affect coded amino acid
non-synonymous mutations
a nucleotide substitution that changes the coded amino acid sequence - missense, nonsense and gain of function mutations
loss of function mutations
results in a gene product that is reduced or completely inactive.
types of loss of function mutations
point mutations, deletions, and insertions that disrupt gene function or protein production.
gain of function mutations
result in a gene product with new or enhanced activity
point mutation
change in single nucleotide in sequence - includes substitution, insertion or deletion which can potentially affect product function
types of point mutation
silent, missense, nonsense, frameshift
2 types of base substitution
transition - when purine is replaced by other purine and pyrimidine replaced by other pyrimidine
transversion - when a purine is replaced by a pyrimidine or vice versa.
silent mutations
substitutions that has no effect on amino acid sequence of protein as codes for same amino acid = function protein
missense mutation
substitution of one amino acid for another in a protein, potentially altering its function or resulting in defective protein
nonsense mutation
creates a premature stop codon in the amino acid sequence, leading to a truncated, usually nonfunctional protein.
frameshift
insertion or deletion of nucleotides in a DNA sequence, which alters the reading frame of the gene, potentially leading to significant changes in the resulting protein.
types of chromosomal rearrangements
mutations that cause changes to chromosome structure - deletion duplication inversion and translocation
deletion
removal of part of genetic material
duplication
homologous chromosomes break at different positions and then reconnects to wrong partners = 1 of 2 chromosomes ends up with deleted segment and other has 2 copies of same segment
inversion
breaking and rejoining causes DNA to run in opposite direction from original
translocation
chromosomal segment breaks off and becomes attached to different chromosome
copy number variation
a type of mutation where sections of the genome are duplicated or deleted, resulting in differences in the number of copies of certain genes.
Single Nucleotide Polymorphisms (SNPs)
variations at a single nucleotide position in the genome, which can contribute to genetic diversity and may influence traits and disease susceptibility.
retroviruses
a type of virus that uses RNA as its genetic material and incorporates its genome into the host cell's DNA through reverse transcription.