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micro bio
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1. Describe the defenses and the parts of the GI tract.
Saliva – contains enzymes and antimicrobial properties.
Mucus + IgA – traps microbes, IgA provides immune defense.
Peristalsis – movement pushes microbes out.
Stomach acid – kills most pathogens.
GALT (Gut-associated lymphoid tissue) – immune surveillance.
Tonsils & Peyer’s Patches – lymphoid tissues that detect invaders.
what are the organisms in the GI tract
-Salmonella
-Shigella
-Vibrio cholerae
-Campylobacter jejuni
-Clostridium difficile
-E. coli O157:H7 (STEC)
-Rotavirus
-Norovirus
what is salmonella
symptoms
transmission
prevention/treatment
-Salmonella
Symptoms: Fever, septicemia, vomiting, diarrhea (2–5 days).
Transmission: Fecal-oral (human feces), zoonotic (chickens, reptiles, cattle).
Prevention/Treatment: Food safety, hygiene; severe cases → electrolyte replacement + ciprofloxacin.
what is shigella
symptoms
transmission
prevention/treatment
virulence
-Shigella
Symptoms: Dysentery (bloody diarrhea), fever, intense abdominal pain, vomiting.
Transmission: Fecal-oral from infected persons.
Prevention/Treatment: Hygiene, sanitation; supportive care, antibiotics in severe cases.
Virulence: Shiga toxin → intestinal/systemic damage.
what is vibrio cholerae
symptoms
transmission
prevention/treatment
-Vibrio cholerae
Symptoms: “Rice-water” stool, dehydration, muscle cramps, sunken eyes, shock.
Transmission: Contaminated water/food (esp. in underdeveloped countries).
Prevention/Treatment: Safe water, sanitation; rapid rehydration therapy (oral/IV electrolytes).
what is Campylobacter jejuni
symptoms
transmission
complication
prevention/treatment
-Campylobacter jejuni
Symptoms: Watery diarrhea, fever, vomiting, headache, abdominal pain.
Transmission: Undercooked poultry, contaminated water, contact with pet feces.
Complication: Guillain-Barré Syndrome (temporary paralysis).
Prevention/Treatment: Proper cooking, hygiene; supportive care.
what is Clostridium difficile
symptoms
transmission
prevention/treatment
-Clostridium difficile
Symptoms: Antibiotic-associated colitis, abdominal pain, leukocytosis, watery diarrhea, rapid heart rate.
Transmission: Healthcare-associated, spread patient-to-patient.
Prevention/Treatment: Limit unnecessary antibiotics, hygiene; treat with metronidazole/vancomycin, probiotics, fecal transplant in severe cases.
what is E. coli O157:H7 (STEC)
symptoms
transmission
prevention/treatment
-E. coli O157:H7 (STEC)
Symptoms: Bloody diarrhea, fever; severe complication → HUS (kidney failure, blindness, seizures, stroke).
Transmission: Contaminated food (esp. beef), cattle reservoir.
Prevention/Treatment: Food safety, hygiene; supportive care (no antibiotics—can worsen HUS).
what is rotavirus
symptoms
transmission
prevention/treatment
-Rotavirus
Symptoms: Watery diarrhea, fever, vomiting, dehydration (esp. infants).
Transmission: Fecal-oral via food, water, fomites.
Prevention/Treatment: Vaccination, hygiene; supportive care with fluids.
what is norovirus
symptoms
transmission
prevention/treatment
-Norovirus
Symptoms: Profuse watery diarrhea, vomiting, lasts 3–5 days.
Transmission: Fecal-oral, contaminated food/water.
Prevention/Treatment: Hygiene, sanitation; supportive care.
List the 3 main causes for food poisoning,
staphylococcus aureus
bacillus cereus
clostridium perfringens
what is staphylococcus aureus
associated foods:
foods handled by people
saftey/sugary foods
contamination: skin of food handler, unrefrigerated
symptoms:
Cramping
nausea
vomiting
diarrhea (24 hrs)
what is bacillus cereus
associated foods: Rice/pasta (emetic toxin), meats/veggies (diarrheal toxin)
contamination: Spores survive cooking
symptoms: Vomiting (rice), diarrhea (meats/veggies), lasts 24 hrs
what is clostridium perfringens
associated foods: Undercooked beans/meats
contamination: Heat-labile exotoxin, improper reheating
symptoms: Abdominal pain, nausea, diarrhea (24 hrs)
list the best treatment for acute diarrhea.
rehydration therapy (oral/IV electrolytes)
hand hygiene and food safety: to prevent spread
Avoid untreated water.
Antibiotics only in severe bacterial cases
e.g., ciprofloxacin for Salmonella, vancomycin for C. difficile