REDEMPTION RAHHHHHHHHH
Rules for determining IUPAC name for alkanes
find the longest carbon chain (parent chain
number the parent chain so you have the most possible substituents and all the substituents have the lowest possible number
name the chain- alkane names should be in alphabetical order, all substituent names should end with -yl (exceptions), assign numbers for substituents so that the first substituent has the lowest number
How do you determine which parent chain to choose if there are multiple possible chains with the same length
choose the chain with the most substituents
What to do if there is a tie when naming subtituents
second substituent should also have the lowest number, if there is still a tie the first substituent alphabetically gets the lowest number
when is a prefix used
when there is more than one of the same substituent in a chain
How to name bicyclic compounds
count the carbons in the bicyclic compound
number the 3 pathways from smallest to largest'
place the pathway numbers in brackets
Example: (substituents first) bicyclo [2,2,1] heptane
anti staggered confirmation in Newman projection
methyl or other groups on opposite ends of newman projection
eclipsed conformation in Newman Projections
molecules attached to second C are directly behind and almost hidden by molecules in front attached to first C
gauche conformation in Newman Projections
methyl or other groups on the same side of newman projection
Is a higher energy or lower energy newman projection more stable
lower energy newman projection
what conformation has the lowest energy
anti staggered conformation
what conformation has the highest energy
eclipsed conformation
wedge
up
dash
down
How to draw chair conformation
each C has an axial and equatorial position, the alternate around the ring
If no stereochemistry is given what is the more stable positioning of substituents
equatorial
when stereochemistry is given
substituents should maintain the given sterochem, up stays up, down stays down
Cis
substituents are pointing in the same direction
Trans
substituents are pointing in opposite directions
How to draw most stable chair conformation
Equatorial is more stable than axial
draw both possible conformations
count number of axial vs equatorial
if one has greater number of equatorial it is more stable, if no…
the one with the largest substituent in the equatorial position it is most stable
stereoisomers
have the same molecular formula, different 3D arrangement
Chiral
not identical to mirror image, have a chiral center
Achiral
identical to mirror image, no chiral center
How to determine chiral center
the chiral center has 4 different connected functional groups, no double bonds
entantiomer
mirror image of a chiral compound
How to R and S configuration
assign priority to all 4 groups at each chiral center
Rotate the molecule so the functional group with the lowest priority is behind
determine if rotation is clockwise or counterclockwise
How to assign atom priority
atom priority is determine by atomic number, higher atomic number higher priority
Chain rule
way of determining priority between two chains, go down chains and find difference with higher atomic number
If lowest substituent is on a wedge
flip molecule to determine RS configuration. You can also determine configuration of original molecule then go in the opposite direction ( if the original molecule with lowest substituent on a wedge has a confirmation of R, then the opposite would be S)
specific rotation equation
[a]= observed rotation/conc of sample x length of sample
a= specific rotation
enantiomerically pure
a pure chiral compound with only on enantiomer present
Racemic mixture
mixture of parts of each enantiomer
% ee equation
% ee= observed rotation/rotation of pure enantiomers
diastereomers
not mirror images, at least one chiral center with same configuration
Meso compounds
achiral but have chiral centers due to having a plane of symmetry, compounds can be divided into equal halves
Fisher Projections
highlights the chiral centers of a compound
intersections= chiral center
horizontal lines= wedge
vertical lines= dash
Enthalpy (ΔH)
measure the exchange of kinetic energy between system and surroundings
How to determine ΔH
amount of energy to break a bond (BDE- bond dissociation energy)
total change in enthalpy for a reaction to break bond
ΔH rxn + BDE
total change in enthalpy for a reaction to form bond
ΔH rxn - BDE
Exothermic
system gives energy to surroundings (ΔH = -)
Endothermic
system gains energy from surroundings (ΔH = +)
Entropy (S)
the measure of the disorder associated with a system
Increase in entropy (ΔStot = +)
spontaneous
Decrease in entropy (ΔStot = -)
non-spontaneous
equation of change in entropy
ΔStot= Δsys + ΔSsurr
Gibbs free energy (ΔG)
way of expressing total energy
-ΔG
spontaneous
+ΔG
non-spontaneous
Gibbs Free Energy equation
ΔG= ΔH - TΔS
ΔH
associated with the change in entropy of surroundings
ΔS
associated with the change in entropy of system
Keq
equilibrium constant
equilibrium equation
Keq = Products/Reactants = [C][D]/[A][B]
When Keq > 1
reaction favors products and ΔG is -
When Keq < 1
reaction favors reactants and ΔG is +
equation that relates Keq and ΔG
ΔG= -RTlnKeq
Kinetics
study of the rates of reaction
(k)
rate constant
general rate equation
rate= k[A]x[B]y
first order
rate= k[A]
second order
rate= k[A][B]
third orderk
rate= k[A]2[B]
What 3 factors the value of rate constant depends on
energy barrier between reactants and products, lower Ea= faster reaction
raising temperature will increase reaction rate
the orientation and geometry of reactants will impact frequency of collisions- more frequent collisions = higher rate of reaction
Catalyst
compound that can speed up rate of reaction without being used up
thermodynamics
tells us about the equilibrium concentrations of reactants and products
Higher activation energy
higher energy product= thermodynamically favored= slower reaction
Lower activation energy
lower energy products= lower activation energy= kinetically favored= faster reaction
reaction ran at high temp
high temp= higher activation energy= lower energy product= thermodynamically favored= slower reaction
reaction ran at low temp
low temp pathway= lower activation energy= higher energy product= kinetically favored= faster reaction
transition states
peaks on energy diagram
intermediates
valleys or dips on energy diagram
nucleophiles
electron rich center, characterized with a positive or paritial positive, have the ability to donate a pair of electrons
electrophiles
electron deficient, characterized by the ability accept a pair of electrons
nucleophile attack reaction
nucleophile “attacks” electrophile and forms a bond by donating a lone pair to electrophile to form bond. Usually a 1 arrow movement but may be 2 when a double bond must be moved or broken to form a bond
loss of leaving reaction
bond is broken between group and more electronegative/nucleophile giving the nucleophile a negative charge and the group a positive charge
Proton transfer reaction
think of an acid-base reaction process, a proton is transferred from nucleophile to electrophile, and takes a hydrogen other molecule in return, usually a 2-arrow movement could be more
Increasing stability of carbocations
methyl (3 H connected to C) < Primary carbocation (2 H connected to C, 1 alkyl) < Secondary carbocation (1 H connected to C, 2 alkyl) < Tertiary Carbocation (0 H connected to C, 3 alkyl)
Hydride shift
H shifts from one side to the other, make a secondary carbocation into a tertiary carbocation
methyl shift
methyl shifts to other side of molecule to turn secondary carbocation into tertiary carbocation