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example of data security in LIMS
NHS synnovis cyber attack
Illumina
NGS, FL&RT, LP → CG → S → DA
example of Big data
CAR-T outcome in B-ALL response prediction
Example of AI drug discovery
Baricitinib, JAK inhibitor in RA and COVID, Autowise in molecular prediction @ JAK pathway
Liver cancer
Affect hepatocytes in erythropoietin func., Pro-inflamm. cytokines release, impair immune system
acute phase reactants in liver cancer
Hepcidin in downregulating ferroportin, maintain iron retention in cells
Serum ferritin elevation during infection, high iron absorption reduces iron for haemoglobin production
Pro inflamm. in liver cancer
TNF, IL-1, change emphasis of erthropoiesis to WBC development @ bone marrow
Immune system impairment in liver cancer
tumour associated macrophages facilitate tumour growth
Cisplatin
chemotherapy induced pancytopenia, bone marrow displacement, nephrotoxic reaction oxygen species
cisplatin thrombo/leucocytopenia
neutropenic sepsis, WBC/platelet count determines chemotherapy fit
nephrotoxic reaction oxygen species
FBC kidney function monitoring, EGFR
Leucoerythroblastic anaemia
Tumour growth displace bone marrow, blast/immature RBC present in peripheral blood film
Leucoerythroblastic anaemia vs haematological malignancy
immunophenotyping, polyclonal vs monoclonal
Haemolytic anaemia
in malignant patients, abnormal inflamm. system or drug induced by RBC bind blocking immune system destruction, WAIHA CAIHA, antiglobulin test
WAIHA
warm, Novel IgG antigen, complementary antibody triggers complement mediated destruction and splenic macrophage phagocytosis
Complement mediated destruction
complement cascade → membrane attack complex → cell destruction
Splenic macrophage phagocytosis
Destroys RBC cell structural integrity, returns to spheres
CAIHA
cold, cold-agglutinin disease and PCH
Cold-agglutinin disease
IgM antigen cause RBC agglutination, blood vessel blockage cause ischaemia
PCH
IgG antigen triggers DL antibody
Blood vessels in tumours
blood pooling, vessel looping, incomplete vessel, 10x permeable
permeable vessels in tumours
improper growth through VEGF imbalance and lack of connective tissue, increase chemotherapy bioavailability but allow fibrin deposition
Fibrin deposition
tissue factor binds with factor seven, activate extrinsic coagulation pathway, induce MAHA
Aplasia
severe pancytopenia, acquired immune vs non-immune mediated
Acquired immune mediated aplasia
associated with thymoma, antibody production vs erythroid pre-cursors
Non-immune mediated aplasia
Bone marrrow failure, chemotherapy therapeutic end-point
Parneoplastic syndrome
complications from abnormal inflamm. state of cancer instead of cancer itself, hepcidin elevation in liver, PNP-polycythaemia, Methotrexate
PNP-polycythaemia
tumour produce erythropoietin like peptides, stimulate excess RBC formation, JAK2 mutation differential
Methotrexate
Part of combination therapy, psuedo-folate deficiency by folate inhibition, cell swelling
Renal disease
impaired hepatocytic erythropoietin production
Dialysis
Anaemia before dialysis cuz of nitrogenous waste, novel antigen induce HTR, erythropoietin injections
Hepatic disease
Clotting defects, pancreatitis,vit K, F2,7,8,10, bile colipase lipase
Sepsis
systemic infection cause leukemoid infection, CML appearance, DIC complication
DIC
83% sepsis, full body → exhaustion, LPS virulence factor in gram neg, D-dimer