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Circadian cycle - throughout the day, controlled physiologically
Controls:
Alertness, muscle contraction speed, body temperature, melatonin level, cortisol, blood pressure
Doesn’t control homeostasis from moment to moment

Circadian rhythm SCN
CR relies on a molecular Negative feedback loop
BMAL1 and CLOCK are transcribed
They begin DNA transcription, producing PERs and CRYs
PERs and CRYs inhibits production of transcription factor, working on 24 hour cycle (strong correlation)
In hypothalamus:
In Suprachiasmatic nucleus (SCN)
Found there were strong correlations of BMAL1 and Clock transcription or PERs and CRYs production occured within a 24 hour cycle

Specific steps - Circadian Rhythm molecular Neg feedback loop
LOCATION: Occurs inside the neurons of the Suprachiasmatic nucleus (SCN) inside the hypothalamus
STEPS:
CLOCK and BMAL1, transcription proteins, form a transcription factor complex
They trigger DNA transcription for the proteins PERs and CRYs, which accumulate slowly in the cytoplasm
After enough PER and CRY proteins accumulate, they Inhibit CLOCK and BMAL1, which then stops the production of more PERs and CRYs
Negative Feedback
PER and CRY will degrade, and when the levels are lower, CLOCK and BMAL1 will trigger transcription again, and the cycle restarts
This occurs over a 24 hour period

Function of Circadian rhythm proteins
The proteins changes neuron firing rate - Interpret Daytime vs Nighttime
When CLOCK/BMAL1 is active (low PER/CRY):
SCN neurons fire rapidly
→ Brain interprets this as daytime
When PER/CRY accumulates and shuts BLOCK/BMAL1 off:
SCN neurons fire slowly
→ Brain interprets this as night
When SCN knows the “time” - sends signals to the rest of the body; regulates
melatonin release (pineal gland)
cortisol timing
body temperature
metabolism
alertness
sleep–wake behavior
Light → retina → SCN molecular clock → neuron firing rhythm → hormone timing → sleep/wake behavior
Suprachiasmatic nucleus (SCN)
Located in the hypothalamus
Determines what “time of day” it is for your body and coordinates daily physiological rhythms
Via CLOCK + BMAL1 and PER/CRY 24-hour cycle
During DAY - SCN neurons fire FAST (low PERs/CRYs)
During NIGHT - SCN Neurons (high PERs/CRYs)
The firing rhythms of neurons → control hormones (melatonin, cortisol, body temp, sleepiness)
The reason neurons fire rhythmically is because the genes inside them oscillate

SCN hormone release
SCN controls many things over 24 hour cycle, including hormone release
Tropic hormones - target different endocrine glands, 24 hour period (cyclical)
Melatonin
Produced in pineal gland - possibly controlled by light
Cortisol
Androgyn
Estrogen
IGF
Not entirely genetic
Environment impacts circadian cycles

Sympathetic Nervous system
Most active during stress, excitement, or physical activity
“Fight or flight”
Increases HR, breathing rate, directs blood to working muscles, not gut
Innervation - Thoracic area
Heart - increases heart rate and how hard it’s beating
Small intestine - turns off absorption and digestion

Parasympathetic Nervous System
Most active during rest
“resting and digesting”
Redirects energy toward maintenance activities like digestion
Innervation - Coccyx and brain stem
Heart - slows down heart rate, softer beating - less blood flow
Small intestine - turns on digestion and absorption

Sympathetic vs Parasympathetic

SNS and PNS - Innervation and Chart
SNS - Thoracic
PNS - Brain stem
Organs tend to have Innervation from both systems - Dual-innervation
Heart:
SNS: increases heart rate, how hard the heart is beating
PNS: slows down heart rate, makes it beat less hard - less blood flowing
Small intestine:
SNS: Turns off digestion and absorption
PNS: Turns on digestion and absorption
Eye:
SNS: pupil dilates, see more light
PNS: pupil shrinks, at rest
Sweat glands:
SNS: localized sweating
PNS: general sweating
Opposite effects from SNS and PNS = Antagonistic

Not dually innervated effects
EAAKL - Emergency Actions Are Key — Lacrimate later.
SNS controlled
Erector pilli muscles of skin
PNS: nothing
Muscle - will just relax under parasympathetic conditions
SNS: contract, causing hair to stand up, goosebumps
Arterioles
PNS: nothing
SNS: vasoconstriction
Adrenal medulla
PNS: nothing
SNS: secretes epinephrine
Kidney
PNS: nothing
SNS: increases renin secretion, which increases BP
PNS controlled
Lacrimal glands of eyes (relax)
PNS: stimulates tear secretion
SNS: nothing

Neurons of PNS vs SNS
Preganglionic neuron
PNS: Long
CNS: Short
NT:
Same for both: Acetocholine
Receptor:
Same for both: Nicotinic cholinergic receptor
Postganglionic neuron
PNS: Short
CNS: Long
NT :
PNS: ACh - Muscarinic cholinergic receptor
CNS: NE - Adrenergic receptor

PNS Neurons
Preganglionic neuron - Long
NT - Ach
Receptor - Nicotinic receptor
Postganglionic neuron - Short
NT - ACh
Receptor - Muscarinic cholinergic recptor

SNS Neurons
Preganglionic neuron - Short
NT - Ach
Receptor - Nicotinic receptor
Postganglionic neuron - Long
NT - NE
Receptor - Adrenergic receptor

NE and Adrenergic receptor
The same NE ligand can cause different responses in different tissue based on the specific receptors
Different receptor subtupes: a1, a2, B1, B2
During SNS:
B1 → Heart Beats faster and stronger
a1 → Vasoconstriction (anterioles)
Reduces blood that goes to skin, gut (sick to stomach), kidney, salivary glands (dry mouth)
No need to know a2
B2 → Lungs, vasodilation - allowing to Breath more
Vasodilation/constriction - how does SNS input along control it?
Arterial - smooth muscle tubes
Contract (vasoconstriction) or relax (vasodilation)
Higher pressure when you drink water, lower when you’re dehydrated - natural pressure in bloodstream, always pushing against muscles
Arteriolar smooth muscle has adrenergic receptors
More SNS signaling = more contraction = Vasoconstriction
No Muscarinic (PNS) because they don’t do anything during PNS
Less SNS signaling = less contraction = Vasodilation
Always some pressure - Basal sympathetic signaling

Kidneys / Adrenal medulla is only innervated by…
SNS
SNS - preganglionic sympathetic neuron that leads to the Adrenal Medulla, which produces adrenaline in response to stress
Remove adrenergic response = stop producing
Don’t need a 2nd neuron to stop

Neuromuscular junction (NMJ)
Neuromuscular junction - Somatic motor neuron (from CNS) innervate skeletal muscle for voluntary movements, SYNAPSE
Motor neuron axon terminal → NMJ → muscle fiber

NMJ NT movement
Presynaptic membrane/neuron
Ca2+ triggers releases ACh from synaptic vesicles
ACh released into NMJ
Postsynaptic membrane
ACh binds to nicotinic recepetors
Causes skeletal muscle depolarization via entry of Na+ ions into the cell
Contraction

Motor unit
1 motor neuron innervates and all the muscle cells it’s innervating (1 or more)

Muscle belly
Depending on size, can be innervated by multiple muscle

Myofiber
Muscle cell
Excitable
AP spreads along membrane (sarcolemma)
Contractable
Get shorter when excited
Extensible
Can stretch
Mot due to action potential

Myofiber anatomy
Sarcolemma - outer membrane, where AP travels
T-tubules - conduct AP, trigger Ca2+ release
Holes in sarcolemma - where AP passes to the inside of the cell
Many mitochondria, underneath sarcolemma
Multi-nucleated - on the outside of the cell, because the inside is where the proteins are, while the nuclei do the repairs on the outside
***Satellite cells = muscle stem cells sitting outside the fiber, repairs muscle cells
Myofibril - a type of muscle protein, inside myofiber
Other proteins: Actin and Myosin
Terminal cisternae - releases Ca2+ in response to AP traveling through T-tubule
Sarcoplasmic reticulum - a smooth ER specific to Myofibers, only stores Ca2+
