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Define Thermodynamics
how the conversion and utilization of energy is related to chemical and physical processes
what are the 2 categories of energy?
potential and kinetic
what are examples of potential energy?
energy stored in chemical bonds; concentration gradients of molecules b/w cellular compartments; electrical potentials
what does kinetic energy manifest as?
heat (thermal energy) arising from molecular and atomic motion
What does the first law of thermo state?
conservation of energy, energy is only converted b/w forms, total energy of the universe remains constant
Define Free Energy
amount of energy freely available to do work at constant temperature and pressure
Energy conservation is characterized in terms of free energy, which in turn is comprised of contributions from what?
enthalpy and entropy
What sign does delta G have during a spontaneous process?
negative
For a spontaneous process, the free energy of the final state is [greater/lower] than free energy of initial state
lower
When delta G is negative, is the reaction exergonic or endergonic?
exergonic
When delta G is positive, enzymes may facilitate a reaction by changing what?
activation energy
Do enzymes change delta G?
NO
When a process is at equilibrium, indiviual molecules continue to interconvert but concentration [does/doesn’t] change
doesn’t
Free energy is a “______ function”
state
Why is glucose so crucial to energy production?
the conversion process produces a large amount of potential energy that is used to drive other reactions
Why are couple reactions useful/crucial?
allows for unfavorable reactions to add together to be a more favorable, energetic reaction
What is enthalpy (H)?
internal energy of the system
At constant temp and pressure, change in ______ is equal to heat absorbed or released
enthalpy
What is an endothermic reactoin?
process that absorbs heat energy (delta H is positive)
What is an exothermic reaction?
process that releases heat energy (delta H is negative)
Changes in enthalpy are typically associated with what?
formation or breaking of chemical bonds
During the break down of ATP, what phosphates have been lost in the phosphodiester bond?
second and third phosphates
During the break down of ATP, the hydrogen bonds between what have been gained? However, this makes them weaker than what bond that was lost?
phosphate and water; covalent oxygen-phosphorous
During the break down of ATP, enthalpy has a net [decrease/increase]
decrease
What is the second law of thermo?
Entropy of a system and its surroundings will spontaneously increase to a maximum
why does the second law of thermo work for organisms?
because they are open systems
Is delta S is more negative, that is it more [ordered/disordered]
ordered
As degeneracy (W) of a system increases, does entropy increase or decrease?
increase
If delta H is negative and delta S is positive, then delta G is [positive/negative] making it [spontaneous/not spontaneous]
negative; spontaneous
If delta H is positive and delta S is negative, then delta G is [positive/negative] making it [spontaneous/not spontaneous]
positive; not spontaneous
what does it mean for a reaction to be entropy driven?
If delta S is sufficiently positive (or the temp is high enough) so that the -TΔS is sufficiently negative to overcome a positive delta H
what does it mean for a reaction to be enthalpy driven?
If delta H is sufficiently negative to overcome the positive value of -TΔS then the overall delta G will be negative
what is the delta G for diffusion of a solute from one compartment to another?
0
Do pumps require energy released by ATP hydrolysis?
yes
What are the types of transport proteins?
Pumps, Channels, Uniporters, Cotransporters
Define uniporters
transport single type of molecule down its concentration gradient
Define cotransport proteins
consist of symporters and antiporters, catalyze the movement of one molecule against its concentration gradient, driven by movement of 1+ ion down an electrochemical gradient