Nucleic Acid Synthesis/Folic Acid Synthesis Inhibitors Pharmacology - GRAVATT

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Last updated 4:41 AM on 3/18/26
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30 Terms

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  • 1. Identify which antibiotics are in the cell wall synthesis or cell membrane inhibitor drug class. 

  • 2. Describe how the antimicrobial kills it’s intended target. 

  • 3. Choose which antibiotic kills which microbe. 

  • 4. Differentiate antibiotics based on potential adverse reactions, drug/drug or drug/food interactions.

  • 5. Design a treatment regimen based on available dosage forms.

Learning Objectives

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  • 1. Drug Classes and associated antibiotics

  • 2. How does the antibiotic kill the microbe? 

  • 3. Bug/Drug coverage

  • 4. Adverse reactions of antibiotics

  • 5. Notable notes- differences in ADME

  • 6. Drug/drug or drug/food interactions

  • 7. Dosage forms (NOT DOSES)

What should I know?

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Fluoroquinolones, Rifamycins, Metronidazole, Nitrofurantoin

What ABX target DNA/RNA synthesis?

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Linezolid, Tedizolid, Tetracyclines, Macrolides, Aminoglycosides, Clindamycin

What ABX target Folate Synthesis?

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  • Mechanism of Action- Affecting DNA/RNA synthesis OR Folic Acid Synthesis (Sulfonamides), which leads to the halting of bacterial cell replication, causing cell death

  • Fluoroquinolones

  • Rifamycins

  • Metronidazole

  • Nitrofurantoins

  • Sulfonamides

Nucleic Acid/Folic Acid Synthesis Inhibitor Points

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  • NVD

  • Risk of C. DIff

  • Hypersensitivity Reactions

Common Side effects of Nuclec Acid Synthesis Inhibitors

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  • Agents: Ciprofloxacin, Levofloxacin, Delafloxacin, Moxifloxacin

  • Mechanism of Action

    • Inhibit DNA topoisomerases, specifically topoisomerase II and IV which leads to breaks within the DNA and cellular death 

  • Metabolism

    • All are metabolized by the liver

    • All EXCEPT moxifloxacin are eliminated renally; therefore, DO NOT use moxifloxacin for UTIs

  • Administration

    • High Bioavailability (> 90% for most, less for Ciprofloxacin or Delafloxacin) 

      • Ciprofloxacin 200mg IV = 250mg PO 

Spectrum of Activity: Varies by Agent, but broad spectrum (Gram +, Gram -, Atypicals)

  • Respiratory FQ: Levofloxacin, delafloxacin, moxifloxacin

  • Pseudomonas: Ciprofloxacin, levofloxacin, delafloxacin

  • Anaerobes: Moxifloxacin

  • MRSA: Delafloxacin

Respiratory (LDM)

Pseudomonas (CLD)

Anaerobes (M)

MRSA (D)

Fluoroquinolones Points (“-Floxacins”)

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  • Suppresses CYP 450 - ↓metabolism of warfarin, carbamazepine, barbituates

  • Cannot give with milk, antacids, sucralfate or iron products AND tube feeds; separate by 2 hours

  • Avoid with drugs that can also cause QTc prolongation

  • Avoid use in Children and Pregnancy

    • Inhibition of long bone growth

  • Avoid use in those with myasthenia gravis

Fluoroquinolones DDI’s/Food

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  • CNS effects: HA, dizziness, agitation, hallucinations and confusion (elderly)

  • Phototoxicity, rash (< 2%)

  • QTc prolongation

  • Seizures

  • Achilles tendon rupture

    • RF: > 60YO, h/o solid organ transplant, use of steroids, strenuous physical activity, h/o tendon disorders, renal failure

  • Hypo/Hyperglycemia

  • Peripheral neuropathy

  • Aortic aneurysm/dissection

  • Delafloxacin- avoid IV use due to cyclodextrin in renal dysfunction

Fluoroquinolones Adverse reactions

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Spectrum:

  • Mostly Gram (-) Organisms

    • Including Pseudomonas

  • Some Gram (+)

    • Not as good as other agents

  • Atypical Organisms


Clinical Uses:

  • UTI’s

  • GNR bacteremias, bone/joint infections. Nosocomial infections

  • Alternative for G(-)Rod infections in those with Beta-lactam allergies


Comments:

  • Available generic, so very inexpensive

  • Increasing resistance with E.coli

  • BA: 70%

Fluoroquinolones (Ciprofloxacin) Spectrum, clinical uses, and comments

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Spectrum:

  • Mostly Gram (-) Organisms

    • Also covers Pseudomonas

  • Some Gram (+)

    • BETTER STREPTOCOCCUS and STAPH coverage

  • Atypical Organisms


Clinical Uses:

  • UTI’s

  • GNR bacteremias, bone/joint infections. Nosocomial infections

  • Alternative for G(-)Rod infections in those with Beta-lactam allergies

  • PLUS

    • CAP

    • Sinusitis

    • SSTI’s

    • Alternative for Mycobacterial infections

Comments:

  • Available generic, however still expensive

  • BA > 95%

Fluoroquinolones (Levofloxacin) Spectrum, clinical uses, and comments

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Spectrum:

  • Gram (-) Organisms

    • Not as good Gram Negative Rod coverage

    • DOES NOT COVER Pseudomonas

  • Some Gram (+)

    • BETTER STREPTOCOCCUS and STAPH coverage

  • Atypical Organisms

  • Also Anaerobic Coverage


Clinical Uses:

  • CAP

  • Sinusitis

  • SSTI’s

Comments:

  • Cannot be used for UTI’s

  • BA: 86%

Fluoroquinolones (Moxifloxacin) Spectrum, clinical uses, and comments

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Spectrum:

  • Some Gram (-) Organisms

    • Also covers Pseudomonas

  • GOOD Gram (+)

    • BETTER STREPTOCOCCUS and STAPH coverage (Including MRSA)


Clinical Uses:

  • SSTI’s

Comments:

  • BA: 59%

Fluoroquinolones (Delafloxacin) Spectrum, clinical uses, and comments

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  • Gene Mutation

    • Altered Target sites

    • Efflux pumps

  • Plasmid Mediated

    • QNR proteins

    • FQ modifying enzymes

    • Efflux pumps

Mechanisms of Resistance for Fluoroquinolones

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  • Agents: rifampin, rifabutin, rifapentine, rifaximin

  • Mechanism of Action

    • Inhibits RNA polymerase, which stop transcription by blocking messenger RNA

  • Metabolism

    • Hepatic; highly lipophilic and crosses BBB

  • Administration

    • Rifampin- typically 1:1 IV:PO

    • Rifaximin: nonabsorbed antimicrobial that only acts within the GI tract (think of how PO Vancomycin works)

    • Rifapentine- given once weekly 

  • Spectrum of Activity

    • Rifampin, rifabutin, rifapentine: Mycobacterium species

    • Rifampin: Gram +, including MRSA; never use a a solo agent

    • Rifaximin: Gram +, Gram – such as enterobacteriacae; only active in the GI tract

Bacteriostatic

Rifamycins Points

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DDI/Food interactions:

  •  Take on an empty stomach

  • TONS of DDIs as it is a POTENT INDUCER of CYP450

    • Rifabutin has les DDIs and the preferred drug to use when patients on antiretrovirals 

  • ALWAYS check for DDIs

Adverse Reactions:

  • Red/orange discoloration of bodily fluids- urine, tears, saliva

    • May stain contact lenses

  • Liver dysfunction- monitor LFTs

  • Rash

  • Fever

  • Rifabutin- optic neuritis and leukopenia

Rifamycins DDI’s and Adverse reactions

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  • Mechanism of Action

    • Production of free radicals that damages DNA and causes cellular death

  • Metabolism

    • Hepatic metabolism

    • Great penetration into the CSF as well as other tissues

  • Spectrum of Activity

    • Gram – and + anaerobes and protozoa

  • Administration

    • Available IV and PO (equivalent doses)


Bacteriocidal

Metronidazole Points

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DDI’s/Food interactions":

  • Avoid use with warfarin (increases INR)

Adverse Reactions:

  • Metallic taste

  • Disulfuram like reaction (intolerance to alcohol)

  • Rare: hepatotoxicity and pancreatitis

Metronidazole DDI’s/Food Interactions + Adverse Reactions

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Spectrum:

  • Anaerobes

    • B. Frag

    • Other Clostridium sp.

  • Protozoa

    • Giardia lamblia

    • Trichomonas vaginalis


Clinical Uses:

  • In combination with other agents to cover anaerobes

  • Bacterial vaginosis

  • H. pylori treatment

  • Crohn’s disase

  • Giardia infections


Comments:

  • Available Generic, so very inexpensive

  • TASTES BAD!!

Metronidazole Spectrum, Clinical Uses, and comments

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Mechanism of Action

  • It’s byproducts cause DNA damage

Metabolism

  • Liver metabolism; renal excretion

Spectrum of Activity

  • Staphylococcus, Enterococcus (including VRE) and GNRs (not pseudomonas)

Administration

  •  Only PO

  • 2 formulations

    • Macrodantin - crystalline form- 4 times daily

    • Macrobid- macrocystalline/monohydrate form- BID 

  • ONLY can be used of lower UTIs; does not get adequate concentrations for Upper UTIs

  • Cannot be used in those with CrCL< 30 ml/min

    • Will not be enough drug to kill the bacteria when renal function is below this threshold

  • Bacteriocidal in the URINE only

Nitrofurantoin (macrobid) Points

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DDI/Food:

  • Take with meals

Adverse reactions

  • Rare

    • Liver toxicity

    • Pulmonary toxicity

  • Avoid use in those pregnant and at term (38+ weeks)

    • Risk of hemolytic anemia

Nitrofurantoin DDI/Food/ Adverse reactions

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Mechanism of Action

  • Inhibits bacterial cell wall synthesis which inhibitors pyruvyl transferase which is needed for bacterial cell wall synthesis 

Metabolism

  • Renal metabolism and excretion

Spectrum of Activity

  • Staphylococcus, Enterococcus (including VRE) and GNRs including many resistant one such as ESBL

  • Administration

  •  Only PO in the US (IV in Europe)

  • Mix powder with water and administer

  • ONLY can be used of lower UTIs; does not get adequate concentrations for Upper UTIs

  • Bacteriocidal in the URINE only

Fosfomycin Points

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DDI’s/Food:

  • NONE!!!

Adverse Reactions:

  • Headache

  • Vaginitis/Dysmenorrhea

Fosfomycin DDI’s/Adverse reactions

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Sulfamethoxazole/trimethoprim, Sulfadiazine

Mechanism of Action

  • Inhibition of folic acid synthesis through inhibition of dihydrofolic acid formation from para-aminobenzoic acid; trimethoprim inhibits dihydrofolic acid reduction to tetrahydrofolate which leads to inhibition of enzymes of the folic acid pathway

Metabolism

  • Renal and liver metabolism 

Spectrum of Activity

  • Gram (+) including MRSA, Gram (-) such as E. coli, Pneumocystis and protozoa

Administration

  • Available as PO, IV, Ophthalmic and Topical

  • Sulfamethoxazole/trimethoprim – combination product

    • SS: Sulfamethoxazole 400mg/Trimethoprim 80mg

    • DS: Sulfamethoxazole 800mg/Trimethoprim 160 mg

    • Dosed based on the TRIMETHOPRIM component

  • Bacteriocidal 

Sulfonamides Points

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DDI’s/Food:

  • Avoid use with warfarin as it can raise INR

  • Use with caution with potassium supplements due to risk of hyperkalemia

  • Contraindicated in pregnancy, breastfeed or newborns < 2 months old

Sulfonamides DDI’s/Food Interactions

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  • Nephrotoxicity

    • Renal crystal formation

    • Acute interstitial nephritis

  • Trimethoprim- Hyperkalemia

  • Allergies – can be severe as w/ Stevens Johnson Syndrome

  • Bone Marrow Suppression – usually with high doses for prolonged periods of time

  • Hemolytic anemia (G6PD deficiency)

  • Kernicturus

  • Rare – liver failure

  • Contraindicated in pregnancy, breastfeed or newborns < 2 months

Sulfonamides Adverse Reactions

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Spectrum:

  • Some Streptococcus species

  • Staphylococcus species (including MRSA)

  • Enterobacteraciae

  • Listeria

  • Nocardia

  • Pneumocystis jiroveci


Clinical Uses:

  • UTIs

  • Skin/soft tissue infections (including MRSA)

  • Treatment of Prevention of infections in immunocompromised

  • Nocardia

  • Pneumocystis jiroveci

Comments:

  • generic, inexpensive

  • Increasing resistance with E. Coli

  • Needs dose reduction with renal filaure

  • WATCH FOR DRUG RASH

Sulfonamides (Bactrim) Spectrum, Clinical Uses, and comments

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  • Decreased Permeability

    • Dihydropteroate synthase gene mutation= resistance to PJP

    • Dihydrofolate reductase gene mutation= resistance E. faecalis and Campylobacter

  • Plasmids

    • Resistant genes= E. coli resistance

  • Efflux Pumps

Sulfonamide Resistance mechanisms

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  • Skin testing not well validated

  • Oral dose challenge recommended

Notes:

  • Highest rate of BENIGN rashes of any antibiotic

  • Higher in the HIV population, esp. those with low CD4 counts

  • Dapsone does not cross react

  • Low cross reactivity with non-abx sulfa drugs

Sulfa Allergies recommended method of testing for allergy

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Spectrum of activity:

  • Clostridium species, Staph aureus, Enterococcal species

Approved Indications:

  • C. Diff associated diarrhea

Dose:

  • 200 mg PO every 12 hours

PK/PD considerations:

  • Bacteriocidal for intestinal flora

  • Metabolism: Intestinal hydrolysis

  • Excreted via feces

    • Not systemically absorbed

Adverse Effects:

  • Nausea

Dificid (Fidaxomicin) Points

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