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MHC 1
They are found on the surface of almost all nucleated cells in the body
MHC 1
What MHC molecules present peptides from inside the cell to immune cells called cytotoxic T cells.
MHC 2
MHC that are typically found on the surface of specialized immune cells called antigen-presenting cells (APCs) like dendritic cells, macrophages, and B cells.
MHC 2
MHC class molecules present peptides from outside the cell, typically from proteins that have been ingested by the APC.
MHC 3
MHC molecules that are not directly involved in antigen presentation.
Polymorphism
This is a results in the amino acid sequences in their a1 and a2 domains.
Polymorphism
This nature of MHC ensures the immune system's ability to recognize a broad range of antigens and adapt to different pathogens, making them central to adaptive immunity.
Nonpolymorphic
This nature of MHC provide structural stability and support for antigen presentation.
Nonpolymorphic
This nature of MHC ensures that the peptide-binding groove retains its shape and integrity.
If some MHC genes are expressed in some MHC haplotypes but not in others, the effect will be to generate even more diversity than alternative combinations of alleles of a fixed genes.
Explain the relationship between MHC haplotype and disease susceptibility.
MHC 1 present antigens originate from within the body
Explain the relation of MHC I class molecules present in endogenous antigens.
Endoplasmic reticulum
Where do the binding of peptides to newly synthesized MHC happens?
CD8+ or Cytotoxic T cells
To whom do MHC 1 molecules present their antigens
CD4+ or Helper T cell
To whom do MHC 2 molecules present their antigens
MHC 2 present antigens originate from outside the body
Explain the relation of MHC II class molecules present in exogenous antigens
Dendritic cells, macrophages, and B cells
MHC class II molecules are predominantly found on the surface of what type of cells
All nucleated cells
MHC class I molecules are predominantly found on the surface of what type of cells
lysosome and endosome
What organelle do the substance ingested being perform a process of degradation
variations in the number of MHC class I genes expressed
MHC diversity is generated by
TCR-peptide-MCH complexes and the co-stimulatory receptors cluster together in the area of contact to form an immunological synapse
How the TCR recognizes ligands presented by MHC molecules on antigen-presenting cells.
These co-receptors. CD4 is associated with helper T cells, while CD8 is associated with cytotoxic T cells
Why each TCR is also associated with either CD4 or CD8.
CD4 primarily interacts with MHC class II molecules, which present exogenous antigens.
Why each TCR is also associated with either CD4.
CD8 primarily interacts with MHC class I molecules, which present endogenous antigens from within infected or abnormal cells.
Why each TCR is also associated with either CD8.
CD4, associated with helper T cells (CD4+ T cells), primarily interacts with MHC class II molecules. CD8, associated with cytotoxic T cells (CD8+ T cells), primarily interacts with MHC class I molecules.
Compare and contrast CD4 and CD8 and describe the different roles of CD4+ and CD8+ T cells.
Processing of antigens by APCs > formation of MHC-peptide complexes > T cell recognized antigen > T cells are co-stimulated > formation of the immunological synapse
Explain the step-by-step process of how multiple signals sent by antigen-presenting cells are communicated to a T cell through an immunological synapse.
Th1 Cells (T-Helper 1 Cells)
T cells subunit that are primarily involved in cellular immune responses against intracellular pathogens, such as viruses and certain bacteria.
Th2 Cells (T-Helper 2 Cells)
T cells subunit that are key players in the immune response against extracellular parasites, such as helminths, and are involved in allergic responses.
Th17 Cells (T-Helper 17 Cells)
T cells subunit that are important in defending against extracellular bacteria and fungi.
Treg Cells (Regulatory T Cells)
T cells that are regulatory cells that help maintain immune tolerance and prevent autoimmune responses.
interleukin-2 (IL-2)
IL produced by Th1
interleukin-4 (IL-4), interleukin-5 (IL-5), and interleukin-13 (IL-13)
IL produced by Th2
interleukin-17 (IL-17) and interleukin-22 (IL-22)
IL produced by Th17
interleukin-10 (IL-10)
IL produced by Treg cells
Alpha-beta (α/β) T cells
Most common and widely studied subset of T cells in humans and many vertebrate animals.
Their TCRs consist of α and β chains
Alpha-beta (α/β) T cells consist of
thymus, lymph nodes, and spleen
Alpha-beta (α/β) T cells are located in what organ?
γ and δ chains
Gamma-delta (γ/δ) T cells consist of
peripheral tissues such as the skin, mucosa, and gut-associated lymphoid tissue
Gamma-delta (γ/δ) T cells located in what organ
Gamma-delta (γ/δ) T cells
This subset of T cells are less prevalent in humans but are more abundant in certain non-mammalian species, including some reptiles and birds.
naïve T cells encounter antigens > activation and clonal expansion > activated T cells differentiates into memory T cells
How T cell memory develops
Classical
This pathway begins with a complement protein called C1.
Classical
Its pathway is via antigen-antibody complexes
Lectin
this pathway is via MBL-MASP complexes
Alternative
Discovered after Classical Pathway, but much older evolutionary
Alternative
This pathway utilizes a distinct C3 convertase.
C1
Classical pathway begins with
C1 > C1q> C1r> C1s > C4 and C2 > C2a and C4b > C4b2a complex > C3 convertase
Explain Classic Pathway
MBL or Ficolin > complexes with MASP-1 and MASP-2 > activation of MASP-2 > C4 and C2 > C4b2a complexes > C3 convertase
Explain Lectin pathway
C3b > cleaved to Factor B > Factor D cleave Factor B > C3bBb
Explain Alternative Pathway
C3b acts as a versatile immune sentinel by opsonizing pathogens, effectively tagging them for destruction by phagocytes.
Explain the significance of complement components, especially C3b
C5a can degranulate mast cells and stimulate platelets to release histamine and serotonin.
How does the complement system trigger inflammation?
Because some animals are genetically not normal. Some are born homozygous and some are born heterozygous.
Why do deficiencies of some complement components result in increased susceptibility to infections?
Complement
Tightly regulated group of proteins that activated in sequence. Once activated, the system generates multiple effector molecules.
Factor P or Properdin
Enhances the activity of alternative pathway of complement system. It binds to the complex, it forms a stable C3bBbP complex with a half-life of 30 minutes.
Anaphylatoxins
Are is a small complement fragments produced during the activation of the complement system
C3a and C5a
Another name of anaphylatoxins
C3a
This anaphylotoxins acts like other antimicrobial peptides by disrupting bacterial membranes
C5a
This anaphylotoxin enhances TLR-induced production of TNF-a, IL-1b, IL-6.
M cells
They play a crucial role in transporting antigens from the gut lumen to immune cells, initiating immune responses.
Paneth cells
They produce and release antimicrobial substances, including defensins and lysozyme, to help protect the intestinal lining from bacterial invasion.
IELs (Intraepithelial Lymphocyte)
Are a specialized type of white blood cell found within the epithelial layer of mucosal tissues, such as the intestine. They contribute to immune surveillance and help maintain intestinal barrier function.
- γ/δ T cells
Are a subset of T lymphocytes that have a distinct T-cell receptor composed of gamma (γ) and delta (δ) chains. They play a role in various immune functions, particularly in mucosal immunity and early defense against pathogens.
The skin acts as a physical barrier to block pathogens from entering the body. It also contains specialized immune cells like Langerhans cells. The mammary gland provides immune protection to breast milk, offering passive immunity to newborns through antibodies and immune cells.
Explain the immune defenses of the skin and mammary gland
The intestine is considered the largest immune organ due to its extensive mucosal surfaces and the presence of numerous immune cells and tissues. It's a critical site for immune surveillance and defense because it is constantly exposed to a wide range of potentially harmful substances from the diet.
Describe why the intestine is the largest immune organ in the body
The respiratory system has mucous and cilia to trap and remove pathogens. It also contains immune cells in the respiratory epithelium. The genitourinary system includes mucus and natural flora that help prevent infections. Additionally, the bladder and urethra have urine flow, which can flush out potential pathogens.
Explain the defenses of respiratory and genitourinary system
Inductive sites
Site that are located in the body where immune responses are initiated, such as lymph nodes and Peyer's patches.
Effector sites
Sites where the immune responses are executed, like the site of infection or inflammation, where immune cells target and eliminate pathogens.
Immune exclusion
This mechanism prevents pathogens from entering tissues, often through physical barriers like tight junctions in the gut.
Immune elimination
This mechanism involves actively removing pathogens that have breached these barriers, using immune cells and molecules to clear the infection.
Oral tolerance
Is a phenomenon where the immune system learns to tolerate substances that are normally harmless when ingested, such as food proteins or commensal bacteria.
At birth, the adaptive immune system (including B and T cells) is relatively underdeveloped in newborns. Newborns rely primarily on their innate immune system, which provides immediate but nonspecific defense against pathogens Adaptive immune responses, including the production of antibodies by B cells, take time to mature, and infants have limited antibody diversity at birth
Explain the state of development of the innate and adaptive immune system at birth
Newborns receive passive immunity from their mother through the transfer of immunoglobulins (antibodies) via placenta (in humans) or colostrum (first milk). These maternal antibodies provide temporary protection. Maternal antibodies, particularly IgG, can cross the placenta in utero and protect the fetus. After birth, colostrum (rich in IgA) from the mother provides additional immune protection.
Explain how newborn mammals are temporarily protected against infection by transfer of immunoglobulins from their mother
Immunoglobulins (Ig) are transferred from the mother to the fetus via the placenta. This transfer is mainly IgG, providing protection against pathogens. After birth, the mother continues to provide IgA through her breast milk (colostrum), which is absorbed by the neonatal intestine.
Explain how Ig is derived from the mother
Colostrum is the initial milk produced by the mother and is rich in antibodies, particularly IgA. The neonatal intestine has specialized cells that can absorb IgA directly from colostrum, allowing the neonate to acquire passive immunity.
Describe the absorption of colostrum from the neonatal intestine
Colostrum
It is the initial milk produced after birth and is rich in antibodies, growth factors, and other protective molecules. It provides passive immunity and helps establish the neonate's gut microbiome.
Mature breast milk
This follows colostrum, continues to provide nutrition but has a lower antibody content. However, it still supports the infant's health and development.
IgG
Immunoglobulin in the placenta
IgA
Immunoglobulin in milk
If a mother has not been exposed to a specific pathogen, she may not have antibodies against it to pass on to her child.
Example of passive failure
Passive failure
This can occur when maternal antibodies are insufficient or their protection wanes too quickly.
Neonates often cannot be successfully vaccinated because their immune systems are not fully developed. Vaccines rely on the activation of the adaptive immune system, which is not as robust in neonates.
Explain why neonates can’t be successfully vaccinated
Leukotoxin
It is a type of bacterial toxin (cytotoxin) that targets and damages white blood cells (leukocytes), particularly neutrophils and macrophages. It impairs the host's immune response by affecting immune cell function.
Bacterin
Is a type of vaccine made from inactivated or killed bacteria. It is used to stimulate the immune system to produce an immune response against specific bacterial pathogens.
Heat Shock Proteins
These are a group of proteins produced by cells in response to various forms of stress, such as high temperature or infection. They play essential roles in cellular processes, including protein folding and cellular protection
Toxoid
It is inactivated form of a bacterial toxin (exotoxin). It is used as a component in vaccines to stimulate the immune system to produce antibodies against the toxin. Toxoids are used in vaccines to prevent diseases caused by bacterial toxins, such as tetanus and diphtheria.
Provides immediate defense against bacterial invasion. It involves physical barriers, phagocytic cells (like neutrophils and macrophages), complement proteins, and other immune components.
Explain the role of innate immunity in combating bacterial invasion.
PAMPS
What molecular pattern do innate immunity respond to
By binding to their surface, preventing them from infecting host cells or by tagging them for phagocytosis.
Explain how antibodies can neutralize and opsonize bacteria.
Because some bacteria can survive and replicate within host cells.
Describe why T-cell-mediated activation of macrophages is required to kill intracellular bacteria.
o Formation of biofilms.
o Antibiotic resistance.
o Production of immune-evasion proteins.
o Modification of surface antigens.
o Ability to hide intracellularly.
o Expression of toxins.
List and briefly describe the multiple mechanisms by which bacteria resist immune destruction.
Type I
Is a type of hypersensitivity that is immediate
Type III
Is a type of hypersensitivity that is immune complex-mediated
Type II
Is a type of hypersensitivity that is antibody-mediated cytotoxic
Type IV
Is a type of hypersensitivity that is delayed-type
allergies
Example of Type I hypersensitivity
autoimmune hemolytic anemia
Example of Type II hypersensitivity
systemic lupus erythematosus
Example of Type III hypersensitivity
contact dermatitis
Example of Type IV hypersensitivity
Because fungi are eukaryotic organisms with complex structures, and they often invade host tissues more deeply. This is why T cells, especially CD4+ helper T cells, are required to activate phagocytic cells, like macrophages, which are essential for clearing fungal pathogens.
Explain why cell-mediated immune responses are usually required to protect against fungal infections.
They inhibit viral replication within infected cells, They activate neighboring cells, inducing an antiviral state, making it more difficult for the virus to infect nearby cells, They enhance the activity of natural killer (NK) cells, which can directly target infected cells.
Explain the antiviral mechanism of interferons