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Two categories of immune response
innate immunity
adaptive immunity
Innate immunity
sees via PAMPS
evolutionarily older
simple
mucosal and skin surfaces
fast reaction - always on
less specific
no adaptation
same as primary response
Adaptive immunity
sees via antigen
evolutionarily newer
complex
lymphoid tissue
slow reaction - days to weeks
antigen specific
adapts
memory response
How are pathogens detected in innate immunity?
self vs non self
Pathogen Recognition Receptors (ex: TLRs)
Pathogen-associated molecular patterns (ex: LPS)
How are pathogens detected in adaptive immunity?
antigen
T cell bind peptides
B cell bind proteins
Pattern Recognition Receptors
part of innate immune system
recognize microbial PAMPs
inside and outside of cells
Types of Patter Recognition Receptors
Toll-like Receptors (TLRs)
NOD-like Receptors (NLRs)
Peptidoglycan-recognition proteins (PGRPs)
Retinoic acid inducible gene (RIG)-like receptors (RLRs)
Pathway for PRRs
PAMPs (agonist)
PRRs (receptor)
Signal Transduction (messaging)
Gene Transcription (on switch)
Outside TLRs
For bacterial infections
ex: TLR1, TLR2, TLR4, TLR5, TLR6, TLR9
Inside TLRs
for viral infections
ex: TLR3, TLR7, TLR8, TLR9
TLR4
senses lipopolysaccharide
gram negative bacteria
TLR5
senses flagellin
bacteria
TLR7
senses viral ss and ds RNA
viruses
TLR9
senses unmethylated CpG DNA
bacteria and viruses
TLR activation
activation of different combinations of PRRs result in different combination of gene expression and response
different pathogens induce different inflammatory response
Acute phase response
immediate molecular response following pathogen sensing
secrete IL-1, IL-6, TNF-⍺ (cytokines)
What do cytokines act on?
hypothalamus
sickness response = fever, anorexia, sleepiness, depression
liver
production of acute phase proteins and iron sequestration
bone marrow
induce white blood cell production
immune cells
induce cytokine production, trafficking, and activation
Complement System
Family of proteins that interact sequentially to generate biologically active molecules that mediate numerous inflammatory functions
What does the complement system initiate?
enzyme cascade
What are the three complement pathway types?
classical
lectin
alternative
Classical complement pathway
triggered by antigen-antibody complexes
requires time to induce adaptive immunity
Lectin complement pathway
triggered by lectin binding to pathogen
lectin = protein that binds sugars, marks as non-self
Alternative complement pathway
triggered directly by pathogen surfaces
End effect of complement pathway
classical, lectin, and alternative pathways activate C3b (innate response)
cell lysis
inflammation
opsonization
activate other pathways
antigen
substance that binds to lymphocyte receptor
antibody generating molecule
substance recognized by antibodies
foreign material
infectious agent
environmental substances
chemicals
epitope
part of antigen recognized by antibody
if antigen is sentence, epitope is word
What happens when immune system recognizes self antigens as foreign
autoimmune disease
What makes a good antigen?
foreign
relatively higher does
bigger
>10 kilo Dalton
complex structure
tertiary
biologically active
Why is unmethylated CpG recognized as foreign?
almost all self DNA is methylated CpG and microbial DNA is unmethylated CpG
How do T cells see antigens?
see pepride fragments of antigen presented with MHC molecule
How do B cells see antigens
recognize conformational epitopes (3-D shape)
Immune recognition of foreign
innate immunity
recognize patterns
adaptive immunity
antibody (B cell receptor)
T cell recoptor
Examples of bacteria antigens
nucleic acid
pili
capsule
cytosol, enzymes
cell wall
flagellum
exotoxins
haptens
small molecules that are too small to be recognized as foreign
molecules bind to other larger molecules (carrier proteins)
recognized as foreign and elicit immune response this way
is how autoimmune drug reactions occur
Antibodies
immunoglobulin (Ig)
antigen-recognizing protein produced by B cells
surface-bound or free in circulation
antibody = secreted by B cells, free
B cell receptor = surface bound to B cell
Structure of immunoglobulin
chains
heavy chain (inner chain)
light chain (outer chain)
region
constant
variable (on antigen binding sites)
hinge
two antigen binding sites
Heavy chains on antibody
five distinct heavy chain types that are structurally and functionally different
determine the Ig class (isotype)
can switch class by switching heavy chain
Ig classes
IgA (alpha)
IgG (gamma)
IgM (mu)
IgD (delta)
IgE (epsilon)
Structure of Immunoglobulin
hypervariable regions of Ig recognize contact regions on antigen
on infectious organisms, contact regions are hypervariable
Fc region
fragment crystallizable region
tail portion of antibody
interacts with Fc receptor present on innate immune cells
What are the effects of binding to Fc Region?
opsonization
cell lysis
degranulation of mast cells
What are examples of innate immune cells?
macrophages
neutrophils
eosinophils
mast cells
Functions of antibody
neutralization
agglutination
complement activation
opsonization
neutralization
antibodies coat organism’s surface or toxins and prevent binding
major mechanism at mucosal surfaces
agglutination
antibodies bind to and form clumps of organisms which are opsonized and more appealing to phagocytes
complement activation
killing via formation of membrane attack complex
professional antigen presenting cells
dendritic cells
macrophages
B cells
What makes antigen-presenting cells professional?
readily present antigen using MHC II (and MHC I)
loaded with PRRs
great at eating external antigen and processing
effective at processing/breaking down and presenting antigen
antigen processing
large antigen broken down into pieces that can be recognized by adaptive immune response (T cell = peptide and B cell = small protein)
Antigen presentation
For T cells to recognize antigen, it must be presented by MHC
MHC I
endogenous antigen
bound to MHC I molecules
MHC II
exogenous antigen
bound to MHC II molecules
effector cells
>95% of lymphocytes produced during an infection
short-lived
memory cells
small percentage of lymphocytes produced during an infection
long-lived
What do T cells split into?
effector T cells
memory T cells
What do B cells split into?
effector B cell
memory B cell
repertoire of animals B and T cells
every T and B cell has its own unique specific antigen target in an animal
determined by genetics of T cell receptor and B cell receptor
What happens after a T or B cell recognizes an antigen?
proliferation and differentiation of that specific cell
T cell differentiaiton
CD8+
CD4+
Th1
Th2
CD4+ cell
helper T cells
organizer cell via cytokine signals
respond to MHC II
CD8+ cell
cytotoxic T cells
respond to MHC I
attackers
What are the mechanisms of cytotoxic T cells?
granzyme/perforin cell lysis
cytokines (TNF-a and IFN-y)
FasL/Fas interactions
Th1 cell
cell-mediated immunity and production of limited IgG. profile
best for viruses and intracellular bacteria
produces IL-2 and IFNy
Th2 cell
humoral immunity
IgG
IgA
IgE
best for extracellular organisms
produces IL-4, IL-5, IL-9, IL-13
IgG
highest Ig concentration in blood
primary component of secondary immune response
major roles in opsonization, toxin neutralization, and antigen agglutination
IgE
major role in hypersensitivity (allergic) responses and immunity to parasites
IgM
second highest concentration in blood
primary component of primary immune response
IgA
secreted across epithelial barriers
adaptive immune response trends
first exposure has IgM produced first with shift to IgG
once pathogen is cleared IgG and IgM decrease but IgG remains higher due to memory B cells
second exposure has IgG peaking higher and sooner because of memory cells
What happens after pathogen is cleared?
99% of T cells and B cells die by apoptosis = contraction
small population of long-lived antigen-specific T and B cells remain = memory T cells
IL-8 response
neutrophil recruitment (chemotaxis)
IL-12 response
activate T cells (Th1)
induces NK cell IFNy production
IL-1, IL-6, TNFa response
acute phase response (inflammatory cell activation)
vasodilation and leakage (hyperemia and edema)