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What is a good way to visualize cells?
Fixed tissue (fixation defined on next card)
Make thin slices
Stain it to reveal features
*if tissue is unfixed (alive), can see other features such as electrical activity
Define fixation (of tissues)
Fixation consists of two steps: cessation of normal life functions in the tissue (killing) and stabilization of the structure of the tissue (preservation)
For all the following terms, say whether they are present in all cells or are neuron specific: Golgi body, microfilaments, lysosomes, axon, cell membrane, dendrites, endoplasmic reticulum, dendritic spine, mitochondria, nucleus, nuclear membrane, intracellular fluid, microtubules
Only dendrites, dendritic spine and axon are neuron specific membranes; all other structures are present in all cells
The cells are enclosed in a __________; it forms a __________ between inside and outside. The fluid inside cells is called ____________, while the fluid outside cells is called ______________________.
Membrane, boundary, cytoplasm, extra cellular fluid
Membranes are semi-permeable. What does that mean?
Only lipid-soluble or small molecules can get through without help (from proteins that act as selective channels)
Explain the structure of cell membranes
It is a phospholipid bilayer → phospholipids have a hydrophilic head and hydrophobic tail, and are arranged in two layers, with heads pointing to the exterior (of the bilayer)
The hydrophobic interior of the membrane prevents free diffusion of polar molecules — but small uncharged, lipid-soluble molecules are free to pass through it (except they won’t like the aqueous environment)
What are the functions of: Golgi complex, mitochondria, emdoplasmic reticulum and ribosomes
Golgi complex: packaging and processing of proteins
Mitochondria: convert sugar and oxygen into energy (in the form of ATP)
Endoplasmic reticulum and proteins: site of protein synthesis
What is the nucleus? What does it contain?
A membrane bound structure inside the cell body — contains DNA (genetic info)
Name some animals used in neuroscience research
Primates
Cats
Dogs
Mice
Rats
Rabbits
Pigs, Guinea pigs
Sheep
Ferrets
Chicks
Pigeons
Lobsters, electric eels, fish, zebra fish, squid, slug, snails
Drosophila
Etc.
Neurons are the … of the brain
Information processing units
T/F: neurons are the functional units of the CNS; they relay, process, integrate, and relay information
Neurons play many roles, name a few
receive information from sensory receptors
Relay information to other neurons
Control muscles → behavior
Release hormones
Regulate local blood flow
Hold instructions for behavior → memories
Regulates thoughts and emotions
Regulates unconscious physiology → homeostasis
What are the 3 main parts of neurons?
Soma — core region, also called cell body
Dendrites — branching extensions, collect information from other cells
Axon — main root, carries messages to other neurons
A neuron has ________ axon that can branch, most neurons have ______ dendrites
Only one, many
The axon starts at the ______________, and it can branch into ________________ after. Near the end of the axon, there are branches called __________. Each of them ends with a pre-synaptic terminal, a.k.a _________. It is close to the ________________ of the next neuron, but it doesn’t ________ the dendrite: there’s a small gap called a __________.
Axon hillock, axon collaterals, teleodendria, button, dendritic spine, touch, synapse
How do dendrites increase the surface area of a cell? Why does it matter?
There is 1-20 primary dendrites per cell; each branches numerous times, and each is covered in dendritic spines. Both of those together increase the surface area of the cell greatly
Dendrites collect information from other cells: More surface area thus means more information exchange
What are the 3 main classes of neurons ? (Just name)
Sensory, motor, and interneurons
T/F: within each main class of neurons, there are many many different types of neurons
True
There is a wide variety of neurons in terms of sizes and shapes. Why?
Each neuron has a job to do. The morphology of a neuron can tel, us about its function:
Size: neurons with long extensions likely relay information, whereas neurons with short extensions likely engage in local processing
Shape: complex dendrites integrate information from a wide area, while simple dendrites integrate on a much smaller scale and often act as relays
Give characteristics of sensory neurons.
“input”
Bring info TO the CNS
Afferent/Dorsal
Efficient relay cells
One simple dendrite that can be small (like bipolar cells in the retina) or large (like sensory neurons for skin)
Can be among the largest in the body (sciatic nerve ~ 1 meter)
Describe interneurons.
Technically every neuron between a sensory neuron and a motor neuron is considered an interneuron
2 types:
Long-distance projection: possesses long axons that allow them to connect circuits of neurons in different parts of the brain
Local projection: short axons, form circuits only with nearby neurons (within one brain region)
Shapes: chandelier, arcade, cajal retzius, common basket, large basket, neurogliaform, horsetail, martinotti
Give and describe 3 examples of interneurons
Stellate (star-shaped) cell: small; many short dendrites extend around the cell body; short axon
Pyramidal cell: has a long axon, a pyramid-shaped cell body, and two sets of dendrites, apical and basal; carries info from the cortex to the rest of the brain and spinal cord
Purkinje cell: a distinctive interneuron with extremely branched dendrites that form a fan shape; carries info from the cerebellum to the rest of the brain and spinal cord; one of the largest cells in the brain
Give characteristics of motor neurons.
“Output”
Signal FROM the CNS to the muscles/other organs
Efferent/ventral
Located in the cerebral cortex, brainstem and spinal cord
Bushy dendrites to collect info
Usually, large cell body and large axons that connects to muscles
ALL efferent (outgoing) neural information must pass through them to reach muscles
Sensory neurons collect _________ information from the _____ and connect it to _____________ that process the information and pass it on to _________ neurons. Those neurons then move muscles and so produce behaviour.
Afferent (incoming), body, interneurons, motor
What are the three terms used in a sequence to describe neuronal networks?
Input → association → output
Within a neuron: information feeds into the ___________, which feed this information into the ____________, before it is relayed down the ______ which branches at its end.
Dendrites, cell body, axon
T/F: neurons conduct all of the signals they receive (i.e. all signals received by the dendrites will go down the axon of the neuron). Explain
False
A neuron has thousands of inputs, both negative and positive
It processes and integrates the inputs, then potentially relays this information onwards depending on the average summary of the inputs (later flashcards will explain the principle)
T/F: the pre-synaptic axon terminals come in contact with the dendrites of the post-synaptic neuron
False. There is a gap between the two neurons called the synapse
What is contained into the presynaptic terminals?
Chemicals → neurotransmitters and neuropeptides
they are released onto the next neuron to relay the signal
Are chemical synapses unidirectional or bidirectional?
In general, they are unidirectional, meaning that only the presynaptic cell influences the postsynaptic cell
Signals from a presynaptic cell can either _________ or __________ the next neuron
Excite or inhibit
More excitation than inhibition = signal relayed
More inhibition than excitation = neuron stays silent
What are the two views on how neurons code for behaviour?
Each neuron codes for specific aspects of behaviour “grandmother cell” — Jerome Lettvin, 1969
Neurons work together in complex networks to code for specific aspects of behaviour — loss of one or more neurons would not affect behaviour as the network can still function
Accepted = network
Review the cricket / simple network example
T/F: neurons are static
False. They can change, retire, make new connections, etc.
Neurons are post-mitotic. What does this mean?
Means that they cannot be replaced (most); they live with us throughout our whole life
Give main characteristics of Glial cells
Between a 1:1 and 10:1 ratio with neurons
Like neurons, They have multiple forms and play multiple roles
Unlike neurons, they are constantly renewed throughout life
They play the supporting actor role in the nervous system
Name the 6 main types of Glia
Ependymal cells (CNS)
Microglia (CNS)
Astrocytes (CNS)
Oligodendrocytes (CNS)
Satellite Glial cells (PNS)
Schwann cells (PNS)
Describe ependymal cells
Cells that line the ventricles
They help generate cerebrospinal fluid (CSF) and create/assist the flow of the fluid
Describe microglia
Immune system and repair in CNS
Clear dead cells (including apoptotic neurons)
Similar functions as white blood cells (monocytes) and macrophages
Recent evidence shows extensive and essential communication between microglia and neurons
Describe astrocyte/astroglia
Star shaped
Provide structural support
Convey nutrients between blood vessels and neurons
Regulate blood flow
Part of the blood brain barrier
Can play a role in healing the brain after damage
Describe satellite glial cells
Small cells that surround neurons cell bodies located in the autonomic nervous system (PNS)
They resemble the astrocytes and assist in regulating the external chemical environment
Very sensitive to injury and may exacerbate pathological pain
Describe oligodendrocytes
Myelinate axons in the CNS
Branch and myelinate several axon segments of different cells
Describe Schwann cells
Myelinate axons located in the PNS
Myelinate only one segment of only one cell (wraps around the axon)
What wraps around axons? What does it do?
The myelin sheath
Insulates the neurons
Speeds up transmission of the neural signal
Each segment is separated by a small gap called node of Ranvier
T/F: In the CNS, several myelinated and/or unmyelinated axons together with the blood supply and other connective tissue will form what’s called a nerve bundle
False, it’s in the PNS
Many brain tumours arise from abhorrent glial cells. What are those diseases called?
Gliomas
What disease affects myelination
Multiple Sclerosis
When neurons are injured in the nervous system, it can lead to loss of ___________ and loss of ____________ in the affected areas. Is recovery (to near normal function) possible ?
Sensation and movement
Possible sometimes in the PNS, because of glia
Not possible in CNS because of the formation of glia scars (astrogliosis)
look up peripheral nerve regeneration for better explanation on slide 50
Define gene
A gene is a portion of DNA that codes for the structure of a protein. When produced, these proteins direct cell development and function
It is estimated that humans have ~______ protein coding genes (Pertea and Salzberg)
22,300
DNA is stored in the cell nucleus in ___ pairs: ___ pair(s) of autosomal and ___ pair(s) of sex chromosomes. A person with trisomy has ___ chromosomes instead of ___. Each chromosome is one long coiled ____________ molecule made up of 4 simple _______________ (name them). The paring is __ & G and __ & T
23, 22, 1, 47, double-helix, nitrogenous bases (adenine, guanine, cytosine, thymine), C&G, A&T
How does DNA code for proteins?
First, DNA is transcribed to messenger RNA (mRNA)
mRNA is moved to the cytoplasm, where it interacts with ribosomes on the endoplasmic reticulum
The ribosome reads the mRNA code and builds a protein according to the instructions (becomes string of amino acids = protein)
Ribosomes read sets of three mRNA bases, called _______. One translated (previous term) = one _______________, following the RNA code. The RNA code contains ___ combinations, but there is only ___ amino acids.
Codon, amino acid, 64, 20
T/F: proteins are strings of amino acids
True
Describe the structure of an amino acid
All have:
amino group (NH3+)
Carboxyl group (COO-)
A side chain that determines the nature of the amino acid
One hydrogen atom
T/F: proteins are large, complex molecules that play many critical roles in the body; They are essential for the structure, function, and regulation of the body’s cells, tissues and organs
True
A proteins function depends on its _________
Structure
Proteins can be found at 3 locations. Name them. How do they know where to be?
Bound to membranes
Floating free in the cytoplasm
Released outside the cell
Prepared for these locations in the ER and Golgi
When bound to membranes, proteins can act as … (2) What do these do?
Channels (gated or non-gated) or pumps
They regulate the transport of molecules, such as ions, in and out of cells
Give examples of proteins that can change their shape when they interact with other molecules
Cell surface receptors : allows a cell to respond to its environment
Enzymes: regulate biochemical reactions inside the cell
What’s the function of the following (membrane proteins):
Ion channels
Receptors
Transport molecules
Membrane-bound enzymes
Adhesion molecules
Provide diffusion pathway for charged ions across the membrane
Recognize and bind extracellular signalling molecules and transmit message across the membrane
Pumps/carriers move membrane impermeable molecules across the membrane
Synthesize biochemical reactions (both on the inside and outside of the membrane)
Mediate adhesion between cells or between cells and their environments
If all of our cells have the same genes, how come we have different types of cells, tissues, or organs?
Not every cell expresses the same genes — thus, not every cell can generate every protein, making them different (e.g. a liver cell will only express the genes needed to form liver tissues, etc.)
It is the genes that the cell expresses that give the cell its unique identity
T/F: only a small proportion of our genes are expressed in the brain
False, large proportion — underlies the diversity and complexity of neurons