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Human Senses
Vision (sight)
Audition (hearing)
Tactile Perception (touch)
Olfaction (smell)
Gustation (taste)
Sensation
converting physical features of the environment into electrochemical signals in the body
Perception
the psychological representation of these sensory signals that is used to identify aspects of the world, store them in memory, and influence thought and action
From Stimulus to Perception
stimulus energy (light, sound, smell, etc.) → sensory receptors (eyes, ears, nose, etc) → neural impulses → brain (visual, auditory, olfactory areas)
sensation begins during the transition from stimulus energy to sensory receptors and continues up until neural impulses are generated
perception covers the transition from neural impulses to the brain processing regions
3 levels for studying perception
computational
algorithmic
hardware implementation
Computational
what is the goal of the computation
what is the object that I am looking at?
overall analysis
Algorithmic
how can the computational theory be implemented?
What are the edges of this object?
steps and processes along the way
Hardware implementation
how is the algorithm realized physically
what is the biology of the object
parts, neurons, and circuits that allow for it
Psychophysics
the study of the relationship between physical stimuli and the sensations and perceptions evoked by them
Gustav Fechner (1801-1887) coined this in the book Elements of Psychophysics
Goals of Psychophysics
How intense must a stimulus be for the stimulus to be detectable by a human observer?
How different must two stimuli be for the difference to be detectable?
What is the scaling of perceptual experience?
Absolute Threshold
the minimum intensity of a physical stimulus that can be detected
everyone will have a slightly different absolute threshold
Methods for finding someone’s threshold
method of adjustment
method of constant stimuli
staircase method
Method of Adjustment (absolute)
present the stimulus far above (or below) the threshold and have the participant gradually adjust the intensity
stop adjusting when they are barely able to hear the stimulus/just start being able to hear the stimulus
Pros and Cons of Method of Adjustment
Pros: quick, there is a method of comparison (difference between the methods and absolute)
Cons: inaccurate, order effects
Method of Constant Stimuli (absolute)
pre-specify a range of stimuli to test and then present them in random order
the participant responds “yes” or “no” if they heard the stimulus
Pros and Cons of Method of Constant Stimuli
Pros: sound scale is randomized which gets rid of order effects from method of adjustment, more accurate
Cons: time consuming and inefficient
Staircase Method
start at an intensity that is near where you expect the threshold to be
if the participant hears it, decrease the stimulus intensity
if the participant doesn’t hear it, increase the stimulus intensity
we can focus on the area around the threshold and not waste time testing the extremes
greater precision and less time consuming
used in medical settings and in research
Double Staircase Method
converging staircases from opposing directions that eventually converge, tone based on tone heard TWO TRIALS AGO
increases validity and ensures accuracy
Difference Threshold
how much would you need to change the intensity of a stimulus, so that a subject perceives it as different than another
measured as a JND or Just Noticeable Difference
Method of Adjustment (Difference)
both stimuli start at the same intensity and the participant adjusts the comparison stimulus until it is noticeable less/greater than the standard
Method of Constant Stimuli (Difference)
systematically vary the comparison stimulus and ask whether the participant can see (or hear) a difference
Computing JND
participants should say the comparison is more intense than the standard 50% of the time when they are equal
take the point on the curve where 75% of the responses were “yes” and the point where 25% of the responses were “yes” and divide the difference by 2
Function Steepness and JNDs
more steep = smaller JND
less steep = greater JND
Weber’s Law
our perceptions are not linear (phone flashlight demo), stimulus intensity matters!
JNDs will increase as stimulus intensity increases
relationship differs among perceptual dimensions (brightness, heaviness, etc.)
JND = kI (k = Weber fraction which varies by domain and dimension, I = stimulus intensity)
Fechner’s Law
allows us to predict what someone’s perceived intensity of a stimulus is based on absolute threshold
makes the assumption that just one unit of JND is equal to one unit of perceived intensity
depends on validity of Weber’s law
works for brightness and loudness (JNDs increase as intensity increases), but does not account for electric shock or perception in some other dimensions
S = k ln(I/I0) (S = perceived intensity, k = Weber fraction, I = stimulus intensity, I0 = absolute threshold)
Magnitude Estimation (S.S. Stevens)
participant assigns a standard intensity stimulus a value of 100 and then rates a wide variety of other stimuli (all above threshold)
brightness and electric shock have opposing curves
we can estimate perceived intensity from based on actual intensity
perception for many things does not scale linearly, there is an exponential relationship that just noticeable difference is different at larger and smaller intensities
Stevens’s Power Law
S = cI^n (S = perceived intensity, c = constant based on units used, I = intensity, n = dimension-specific exponent)
Neuron Doctrine (Horace Barlow)
perception depends on the combination of activity from many specialized neurons; each neuron responds to specific aspects of a stimulus, called trigger features
each sensory neuron has a job to detect something specific; perception becomes a collective of all detections
The Neuron
neurons have all of the same components as other cells in the body with two main additions:
axons and dendrites
axons
carries electrical signals called action potentials away from the cell body
dendrites
receive chemical signals from other neurons
Brain Matter
gray matter
white matter
cerebral spinal fluid (CSF)
Gray matter
cell bodies = processing
White matter
myelin (axons) = sending
cerebral spinal fluid (csf)
ventricles = cushion/support
ventricles are empty space where CSF is contained, both increase with an aging brain
Action Potentials
neurons are in an extracellular fluid with positively and negatively charged ions
there are different concentrations of positive and negative ions inside and outside of the neuron (gives rise to a voltage)
the difference inside and outside of the cell in charge is the MEMBRANE POTENTIAL
neurons have resting potential of about -70mV (more positive outside of the cell)
ions flow from high to low concentration
voltage gated ion channels open to allow ions to pass through the membrane
results in depolarization of the cell; if depolarization passes threshold of -45mV, the polarization reverses and an action potential is fired
action potentials are all-or-none electrical signals that propagate down the axons
AP can only travel downstream because ion channels upstream are temporarily deactivates (refractory period)
this process repeats and continues down the axon
Synaptic Transmission
when the action potential reaches the end of the axon, the change in electrical potential causes the release of neurotransmitter into the synaptic cleft
the neurotransmitter then binds with receptors in the dendrites of the postsynaptic neuron, causing ion channels to open and change the membrane potential (in the post synaptic neuron)
if the postsynaptic cell becomes depolarized enough, it will fire an action potential
EPSP
excitatory post-synaptic potential (increase likelihood of AP - MP moves closer to threshold)
IPSP
inhibitory post-synaptic potential (decrease likelihood of AP - MP moves away from threshold
Lesions and Patient Work
investigate which brain regions are responsible for cognitive abilities by exploring what happens when they are damaged or removed
Phineas gage: survive damage to frontal lobe → frontal lobe must play a role in inhibiting impulsive behaviors
lesions have become much more safe since Phineas Gage, but not usually used in humans (lesions can be artificially generated)
Single Unit Recording
record rate of action potentials in response to stimulus manipulations
researchers stick an electrode into a patient’s brain, usually a conscious animal
records one neuron at a time
firing rate: spikes/action potentials per second
Pros and Cons of Single Unit Recording
Pros: good precision of where you are measuring (spatial resolution), and good precision in when measurements are taken (temporal resolution)
Cons: mainly only used in animals, sometimes in Parkinson’s patients
Electroencephalography (EEG)
you can record electrical activity by measuring weak signals from inside the brain
poor spatial resolution as signals must be detected through outer scalp (electrical noise issue); localization is poor, but still possible - requires many trials to reduce issues
good temporal resolution when enough trials are run for precise timing (can time lock EEG activity to a specific event)
Magnetic Resonance Imaging (MRI)
person enters a small tight tube for brain imaging
scanners are usually 3 teslas to:
take structural images of the brain
fMRI measures blood response that is correlated with brain activity, but is not actually measuring brain activity
Hemodynamic Response
neural (brain) activity produces increased metabolic demands, which leads to an increase in oxygen-rich hemoglobin
the relative decrease of deoxyhemoglobin makes up the blood oxygen level dependent (BOLD) signal and is the bases of fMRI
by measuring blood flow, we can indirectly make inferences about brain activity (BOLD response takes many seconds to happen → good spatial, bad temporal)
Light and electromagnetic energy
simultaneously both a wave and a string of particles
wavelength: distance between each wave peak
amplitude: the height of each peak
Color
represents the visible light portion of the EM spectrum
A string of particles…
light can be absorbed (black shirt on hot day)
light can be reflected (shiny surfaces and the sun)
light can be refracted (eye glasses bend light to revisualize it)
Animals and Eye Structure
different animals have different eye positions for different purposes & evolutionary advantages
Three membranes
sclera
choroid
retina
sclera
tough protective covering that makes up the white of your eye and the transparent cornea at the front
choroid
contains most of the blood vessels that supply oxygen and nutrients
retina
made up of neurons, including the photoreceptors
The Cornea
rigid, transparent membrane at the front of the eye
sharply refracts the light - performs most of the focusing of light on the retina, but cannot adjust
The Iris and Pupil
the light receiving part of the eye
Pupillary Reflex
the iris is a muscle that contracts in response to the intensity of light entering the eye
the pupil gets smaller in bright light and larger in dim light
Three Chambers
anterior and posterior chambers: filled with aqueous humor (waterish substance that slightly refracts light)
vitreous chamber: filled with vitreous humor
Floaters
relatively harmless shadows and spots that move across the visual field, clumps of debris that float around inside of the eye (specifically in the vitreous chamber)
Capturing Light
as in the camera example, light is captured through an aperture (pupil) and projected onto a surface (retina)
Human Lens
allows us to change how we focus light (CAMERA LIKE)
changes shape depending on distance of focus
focuses light on one spot
focal length
Focal Length
distance from the lens at which the object is in focus
the farther something is, the lens becomes thinner and does not have to refract light as much (long focal length)
the closer something is, the lens becomes thicker and must refract more light (short focal length)
Lens Accommodation
zonule fibers connect the lens to the choroid
when the ciliary muscles relax, the choroid pulls on the zonule fibers, stretching the lens: this results in a weak lens
when the ciliary muscles contract, the lens takes on a thicker, rounder shape: this results in a strong lens
Photoreceptors
two types: rods and cones
light must travel through all of the retinal layers to reach the photoreceptors
Rods
provide black and white vision in dim light
Cones
provide high acuity color vision in bright light
Spectral sensitivity
3 types of cones, 1 type of rod
S-cones: short wavelength sensitivity
M-cones: middle wavelength sensitivity
L-cones: long wavelength sensitivity
rods fall between S-cones and M-cones on sensitivity
Transduction
each photoreceptor has photopigments
photopigments have two possible shapes called isomers
during photoisomerization, the shape of the photopigment changes from one isomer to another
this sets in forth a cascade of actions that eventually leads to the depolarization of the photoreceptor
Fovea
where light from the center of our gaze strikes the retina (center of your vision)
has the highest acuity
no rods present and the cones are thinner to fit more in a tight space
Sensory Acuity
the fineness of discrimination or sensory precision
acuity is greatest in the central region of the retina, called the fovea
Distribution of photoreceptors
most cones revolve around the fovea
rods are farthest from the fovea
the center of our vision is where we see color best
Optic Disk
location where the axons of the retinal ganglion cells leave the retina (making up the optic nerve) and travel to the brain
there are no photoreceptors at this point
Convergence
retinal ganglion cells are outnumbered by photoreceptors 100 to 1
many-to-one organization
a single RGC receives inputs from many other retinal cells; the combination of signals from photoreceptors is called convergence
Spatial Summation
with a higher degree of convergence, there is a higher firing rate of RGCs, but this results in lower acuity as only one RGC is receiving input
with a lower degree of convergence, there is lower to baseline firing rate of RGCs, but this results in higher acuity as multiple RGCs are receiving input
Receptive Fields
the region of a sensory surface in which the presence of a stimulus causes a change in the neuron’s firing rate
dependent on the size of the dendritic tree and input surface area
larger convergence = larger receptive field
Relationship between receptive field size & the fovea
receptive field size increases with distance from fovea
parasol RGCs: higher convergence, further from fovea → larger receptive field
midget RGC: lower convergence, closer to fovea → smaller receptive field
RGC Center-Surround Receptive Fields
on-center: excited by light in the center so action potentials are greater
off-center: inhibited by light in the center so action potentials are lesser
Lateral inhibition
each cell is stimulated either through inhibition or excitement by the direct cells to the left and right
inhibitory horizontal cells are at work
difference between light stimulation between center & surround creates a difference
if these regions both have the same amount of light, they cancel out and are at baseline
This exaggeration of shade helps us to detect differnces
Dark Adaptation
the highest level of light that reaches our retina is at least a million times greater than the lowest levels that we can detect
RGC firing rates range from ~1-100 spikes per second
Problem: How to represent 1-1,000,000 range with a code of 1-100
the sensitivity of our RGS (the operating range) changes according to current conditions
rod-cone break: rods are more sensitive than cones after about 8 minutes of darkness
this allows us to still see shapes and figures in the dark with limited range
when reversed: dark to light - rods become ineffective quickly and you become more dependent on cones
Contralateral Organization
input from the left visual field goes to the right side of the brain
input from the right visual field goes to the left side of the brain
Optic Chiasm
where the neurons making up the optic nerve intersect
the optic nerves from each eye split in half; RGC axons from the right half of each retina combine to form the right optic track
RGC axons from the left half of each retina combine to form the left optic tract
Lateral Geniculate Nucleus (LGN)
part of the thalamus - a relay station for sensory inputs
thalamus is large structure in the middle of the brain
sensory info goes here first and then gets sent out to other parts of the brain (can either allow or prevent info through)
LGN has many layers that lead to information streams and pathways in the brain (dorsal, ventral, etc.)
visual gatekeeper
thalamus responds stronger when paying attention
LGN Organization
magnocellular layers (1-2): being dorsal stream, motion
parvocellular layers (3-6): begin ventral stream, detail and color
koniocellular layers: between each of the magnocellular and parvocellular layers, color(?), much less understood
Retinotopic Map
the cells are organized in a way that correspond to areas of the retina
RGCs with adjacent receptive fields connect to adjacent LGN neurons
each layer only received input from one eye
right eye goes to some layers of LGN while left eye goes to others
Parvocellular layers receive signals from midget RGCs
Magnocellular layers receive signals from parasol RGCs
Koniocellular layers receive signals from bistratified RGCs
Primary Visual Cortex (V1)
at the very back and bottom of the brain in the occipital lobe
Hubel and Wiesel
responsible for figuring out what cells in V1 did
studied cats
Simple Cells
dependent on angle, light must be a certain orientation
responds most strongly to a bar of light with a particular orientation (preferred orientation)
Neural Basis of Tuning
RGCs send signals to LGN cells one-to-one
LGN cells have circular center-surround receptive field as do RGCs
What can you tell from a single or multiple cells?
one orientation leads to one V1 cell firing, but light contrast can also impact firing
similar firing rates dependent on orientation AND light contrast
multiple cells help us to increase certainty → population code
we need to look at many cells in a region to understand what is making each cell fire, relative differences are preserved as we change overall contrast
Complex cells
orientation selective BUT:
responds equally well to light bar on dark or dark bar on light
responds equally well to stimuli at any location in the receptive field
Cortical Columns
small volume of neural tissue ~0.5mm in diameter and 2-4mm tall
Columnar Organization
sensory neurons that share functional properties often group together in vertical cortical columns (of hundreds to thousands of cells), and functionally similar columns group together
e.g., stripes that show a preference for inputs from either the left or the right eye (‘ocular dominance columns’)
How can researchers measure columns
perpendicular
oblique
Perpendicular
the electrode is placed all the way down the surface, if columns exist, we will find that these cells that it passes through will have similar properties (overlapping receptive fields for example)
Oblique
if you pass through the electrode at an angle, these cells should all have differences as they are from distinct columns
Ocular Dominance Columns
cells in the column correspond to specific layers of the LGN
eyes divided by layers in LGN to LGN being divided by columns in the V1 (layers alternate as to which eye they receive signals from)
Orientation Columns
the entire thing is organized with all of these layers
if you take the electrode deeper into the cortex, the tuning changes based on the orientation of the electrode
the cells V1, there is a strong organization of these cells
Orientation Columns & Visualization
surface of V1 in a treeshrew
cortical surface is illuminated with 605nm light and photographed
blood changes register in the photograph
images are combined and color-coded to indicate orientation selectivity
What is the goal of retinotopic mapping?
determine whether there is a map of physical space that is encoded in visual cortex
Context of retinotopic mapping
researchers had previously mapped out visual regions in the non-human primate brain (among others)
this was impossible to do noninvasively in humans
until…fMRI!
by taking advantage, we can define sub regions of the visual cortex
most visual regions have retinotopic map, if we present moving stimuli across the retina, we should see the activity move throughout the map → fMRI
Retinotopic Mapping Hypotheses
by presenting moving checkerboard stimuli, we should see movements in activity throughout the brain
importantly, these movements should be independent for each brain region
visual areas border each other with a mirrored representation
the exact positioning of these sub regions vary, we can ask more specific questions about that area