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extinction
complete loss of an entire species, global loss, extension of natural selection
extirpation
regional loss of a species from a community
speciation
adding additional species via evolution, opposite of extinction
at what rate should extinctions occur
extinctions should occur at roughly the same rate new species evolve
do famous evolutionary biologists emphasize biological or physical factors as the driving force of extinction
biological
is extinction inevitable by evolution
to some degree yes, over 99% of species known to science are now extinct, occurs slowly-background extinction rate
what can elevated rates of extinction lead to
when extinction rates greatly exceed background rate this can lead to mass extinction events
mass extinction
75% of species lost in short geologic time-2 million years
how many mass extinctions have we had since the Cambrian period
5
end ordovician mass extinction event
rapid cooling due to first terrestrial plants, mountain range formations, and positioning of land masses; glaciation causes sea levels to fall, takes 5 million years for diversity to recover
late devonian extinction
age of fishes, first land tetrapods, rapid expansion of land plant diversity, results in weathering of rocks, causes cooling and anoxic conditions in water
end permian extinction
the great dying, volcanic eruptions in areas with a lot of carbon deposits, rapid warming and ocean acidification ensued, major collapse of corals and marine communities, 8-10 million years to recover
end triassic extinction
smallest, volcanoes, warming, and anoxic ocean conditions
end cretaceous (K/Pg or K-T)
66 mya, asteroid, sediment blocked sun for months, differs from others because they were mostly marine events
current extinction event
extinction rate is elevated past background rate, experts say we are at the beginning of the 6th mass extinction, evidence says it is tied to humans
how old is earth
4.5 billion years
when did the first vertebrates appear
500 mya
when do modern humans appear in the fossil record
200,000 years ago
what kept populations low of early humans
hunter-gather lifestyle, increased with agriculture, rapid growth from industrial revolution in the 18th century-reached 1 billion
how do prehistoric homo sapiens tell us how humans have impacted biodiversity
areas colonized by prehistoric homo sapiens had high extinction events
early humans and extinction in north america
previously home to many megafauna, 74-86% became extinct after humans arrived due to hunting and burning/clearing of forests; similar pattern of decline 40,000 years ago in australia where a variety of large animals disappeared when humans arrived, islands like madagascar; africa is one of the few places where megafauna are still abundant, african species had been coevolving with humans
coevolution
changes that occur between organisms as a response to interactions between them and the resulting mutual selective pressures that those interactions cause
when has the majority of habitat loss occurred
last 100-200 years
recent extinctions
early human caused mass extinctions are known only from fossil evidence, written records date back to 1600s, primarily large species with a focus on birds and mammals, they are well documented so they provide insight into extinction crisis
centinelan extinction
extinction of a species not yet described by science
mammal background extinction rate
2 extinctions per 100 years per 10,000 species, 9 since 1900, but actually 477 have gone extinct
what two factors can provide earlier indications of an extinction
extirpation and range constrictions
there is hope because…
most modern species are still represented somewhere on the planet, there are opportunities for conservation and restoration, human population growth is slowing especially for industrialized nations, shift from geometric to logistic growth
how do spiritual practices practice conservation
confucianism, taoism, hinduism, and buddhism all emphasize natural areas as spiritual places or living entities, islam, judaism, and christianity have sacred responsibility to guard nature
early management practices to protect shared resources
hunter-gather societies had systems-eldest male sets fishing limits in tribes; intergenerational sustainability-chinese philosophy
nature reserves and nobility
forests were reserved for kings and hunting, later used for lumber for kingdom, real nature reserves without the purpose of religion or hunting are relatively new-last 4 centuries
which nation had the first national park
mongolia in 1783
US was first to develop a national parks system
the first one was yellowstone, approved on march 1, 1872
what were john muir’s ideas
the goal of conservation is to preserve wilderness areas that are unoccupied and untouched by human beings
what were gifford pinchot’s ideas
natural resources should be used in ways that are sustainable
what were leopold’s ideas
humans have an ethical obligation to manage nature in ways that maintain the health of the ecosystem
when did conservation biology form and what year was the foundational paper
1980 and 1985
conservation biology
integrated, multidisciplinary scientific field that developed in response to the challenge of preserving species and ecosystems.
3 goals:
document full range of biodiversity on earth; investigate human impact on species, genetic variation, and ecosystems; develop practical approaches to prevent the extinction of species, maintain genetic diversity within species, and protect and restore biological communities and their associated ecosystem functions
three main levels of biodiversity
genetic diversity, species diversity, community/ecosystem diversity
genetic diversity
variation within members of the same species, ultimate source of biodiversity, genetic differences are crucial for evolution, genetically homogenous populations lack variation that is good to survive adverse events
genetic bottlenecks-significant reduction in population size, leading to loss in genetic diversity-cheetahs: 100,000 and 10,000 YA, recovered to 100,000 in 1800s but now 7,000, 0.1-4% of genetic variation
population
group of individuals that occupy a particular geographic area and can interbreed
2 ways to measure genetic diversity
allelic diversity: variety of alleles found at a particular gene within a population or species, allele frequency/polymorphism(P)-fraction of gene in which alternative alleles occur; influenced by natural selection, genetic drift, and gene flow, represents long-term adaptive potential and very sensitive to bottlenecks, traits can be lost quickly
heterozygosity(H)-variety of genes found on chromosome where the individual is heterozygous; influenced by inbreeding and outbreeding; less sensitive in short term to bottlenecks
H and P are complimentary, healthy levels can help ensure the reproductive success, growth, and adaptability of rare or threatened species
species diversity
species that comprise a biological community; most widely used measure of biodiversity because species is the most fundamental unit of evolution
community: collection of species that occupy and interact in a location
3 main definitions of species
biological species concept, morphological species concept, evolutionary species concept
biological species concept
individuals that can interbreed with each other and do not breed with other species
challenges: asexual species, physical/geographic barriers, hybridization
morphological species concept
individuals that are morphologically, physiologically, or biochemically distinct from other groups in characteristics
challenges: members of the same species can have high phenotypic variation in the same population, can vary in consistent ways, range-specific variation can be misleading
cryptic species appear visually indistinguishable but are evolutionarily distinct enough to be considered distinct species
evolutionary species concept
a species is a group that share similarities of DNA, evolutionary past indicates a species; historically difficult due to limited genetic technology, very feasible to look at genetic sequence of different taxa at lower costs
cryptic speciation and conservation
if two or more species are mistaken for one, the population and distribution of that species can be inflates which can lead to more restricted ranges increasing the risk of extinction due to lack of monitoring
species richness
number of unique species
simpson’s dominance index (D)
probability that two species from the same community are the same species, 0-1, closer to 1 means strong dominance and low diversity, diversity index is 1-D
shannon’s diversity (H)
combines evenness and richness, more weight to rare species and emphasizes species richness
ecosystem
biological community and abiotic environment
common aspects of community structure
trophic structure, food webs/species interactions, composition of impactful species
trophic structure
trophic cascades, way to think about community structure
food webs/species interactions
provide better representations of trophic interactions, network analysis can identify important species and dependencies that exist within a web, loss of one species can result in a secondary extinction, multiple secondary extinctions = extinction cascade
species composition
some species have impacts in an ecosystem that are disproportionate to their abundance
ecosystem engineers influence the diversity of a community by creating a habitat for other species, keystone species influence the diversity of a community through species interaction
ecosystem engineers
beaver dams create wetlands that support biodiversity and help reduce flood impacts, went extinct in the UK but are now returning and studies suggest their power to restore damaged ecosystems, 12 years after reintroduction a degraded wetland saw 50% more plant diversity and major wildlife gains
biodiversity
earth has higher biodiversity now despite losses in recent years
are we more likely to discover new phyla or a new genera
genera
8 biogeographic realms
palearctic, afrotropical, indo-malay, australasian, oceanic, nearctic, neotropic, and antarctic
biomes
areas that can be identified by their dominant vegetation type or by their dominant physical processes in aquatic habitats; terrestrial biomes change as a function of temperature and rainfall; tropical forests, coral reefs, and freshwater areas are most diverse
biodiversity hotspots
high levels of species richness, 25
4 types of ecosystem services
supporting, provisioning, regulating, cultural
supporting services/ecosystem functions
control the stocks and fluxes of energy and matter in ecosystems, influenced by organisms that becomes involved in fluxes, resource capture, biomass production, decomposition and nutrient cycling to be broken down into soluble inorganic forms
provisioning services
material outputs from ecosystem that are used by people; food, medicine, raw materials, biotech
regulating services
regulate stability of ecosystem processes over time; affect water, soil, plants, climate, protection from natural disasters, etc.; natural insurance for human well-being
cultural services
nonmaterial benefits people obtain from ecosystems; powerful motivator; ecotourism
biological characteristics most important for regulating ecosystem services
functional traits of organisms, biodiversity levels
functional traits
morphological, physiological, and behavioral traits of species will dictate ecological role species will play, ES are often product of small number of species, usually dominant, changes in density or biomass of that dominant species can be used to predict the impact on the ecosystem function, scientists are building functional trait databases to link species traits to ecosystem services and how they respond to environmental change
animal examples: body size, diet, locomotion, etc.
plant examples: leaf area, root depth, wood density, nitrogen content, etc.
biodiversity
strong evidence that genetic diversity and species diversity regulate supporting services, species richness increases capture, higher net primary production, also increases ecosystem stability so higher diversity resulted in less yearly fluctuation of biomass
crops with more genetic diversity have higher yields, oceans with more fish species have more stable fisheries yields, forests with more tree species have more wood, ecosystems with more plant species are more resistant to invasive pests and disease, ecosystems with more plant species sequester more carbon and lead to more fertile soils
4 possible mechanisms: niche partitioning, positive interactions, selection effect, dilution effect
niche partitioning
`dividing limited resources can lead to improved efficiency
positive interactions
positive interactions between species can allow communities to be more efficient and productive
selection effect
with a lot of species, at least one will be productive/good for a particular service
dilution effect
more species reduces risk of infection by zoonotic diseases because they are likely to meet more incompetent hosts