U1: Chapter 2: Matter

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1

energy

all organisms require an input of ____ from the environment

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2

ATP

organisms generally convert the energy they obtain into

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3

carbohydrates, lipids, proteins, and nucleic acids

What are the biological molecules?

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4

water

What is the most abundant molecule in living organisms?

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5

enzymes

proteins that act as catalysts to speed up biochemical reactions

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6

hydrogen bonding

the attraction between the positive (hydrogen) side of water molecule and the negative (oxygen) side of another water molecule

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7

hydrogen

What is the positive side of a water molecule?

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8

oxygen

What is the negative side of a water molecule?

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9

ionic compounds

Water is a good solvent of

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10

water is a good solvent

Why can so many biochemical reactions take place within a cell and its immediate environment?

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11

acid

more H+ than OH-

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12

base

more OH- than H+

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13

cohesion

ability of water molecules to stick together

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14

adhesion

ability of water to adhere to other molecules

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15

surface tension

difficulty in breaking the surface of water

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16

high specific heat capacity and thermal conductivity

it heats up and cools down quickly

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17

monomers

building blocks of larger macromolecules called polymers

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18

macromolecules

large molecules that fall into four categories: carbohydrates, lipids, proteins, and nucleic acids

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19

condensation reactions

responsible for the biosynthesis of polymers from monomers with the removal of water

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20

hydrolysis

break down polymers into their monomers with the addition of water

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21

carbon, hydrogen, and oxygen

What elements are found in all organisms (and macromolecules)?

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22

proteins and nucleic acids

nitrogen is commonly found in

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23

proteins

sulfur is commonly found in

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24

nucleic acids

phosphorus is commonly found in

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25

carbohydrates

consist of sugar and polymers of sugars

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26

sugar

monosaccharides, disaccharides, polysaccharides

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27

glucose C6H12O6

the most important monosaccharide and its formula

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28

the bonding between carbohydrate subunits

What determines the specific orientation of a carbohydrate and its secondary structure?

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29

lipids

water-insoluble molecules composed of glycerol and fatty acids

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30

fats/triglyercides

energy storage molecules consisting of one glycerol molecule with three fatty acid molecules attached

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31

saturated fatty acids

do not contain a double bond and are more likely to be solid at room temperature

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32

unsaturated fatty acids

have one or more double bonds and are more likely to be fluid at room temperature

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33

phospholipids

consist of one glycerol molecule with two fatty acid molecules attached as well as a polar component; they can self-assemble into a classic bilayer arrangement that is the basis of all biological membranes

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34

wax and steriods

lipids with more complex structures that have a number of functions, including cholesterol

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35

proteins

polymers made up of different combinations of 20 commonly occurring amino acid monomers

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36

protein functions

structural components of cells and tissues

transporting materials through the cell membrane

catalysts (enzymes)

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37

peptide bonds

How are amino acids connected?

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38

dehydration synthesis

proteins are formed via

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39

hydrogen atom

carboxyl group (COOH)

amine group (NH2)

variable r group different for each amino

the central carbon atom in amino acids is covalently bonded to four atoms or functional groups:

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40

primary structure

refers to the specific linear sequence of amino acids in a polypeptide

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41

secondary structure

the initial folding patterns of certain lengths of the polypeptide chain, such as alpha helices and beta pleated sheets

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42

tertiary structure

refers to the overall shape in which a polypeptide eventually folds

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43

quaternary structure

arises from the association of two or more folded polypeptides to form a multisubunit proteinn

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44

nucleic acids

made from nucleotides, DNA and RNA

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45

5 carbon sugar, phosphate group, nitrogen base

parts of a nucleotide

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46

adenine, thymine, cytosine, guanine

DNA bases

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47

adenine, uracil, cytosine, guanine

RNA bases

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48

carbohydrates

general functions:

energy

energy storage

cell wall structure

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49

lipids

general functions

energy storage

plasma membrane structure

physical protection

hormones

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50

proteins

general functions:

biochemical catalysts

structure, movement, signal reception

transport of materials in and out of cells

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51

nucleic acids

general functions:

storage of genetic information

converts genetic information into proteins

energy currency of the cell

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52

enzymes

proteins that act as catalysts to speed up biochemical reactions

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53

activation energy

the energy required to initiate a chemical reactiona

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54

lower

enzymes _____ the activation energy of a reaction

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55

substrates

enzymes combine with ______, they have an active site where it attaches.

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56

catalytic reaction

What kind of reaction takes place when the enzyme and substrate are joined, forming a product?

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57

recycled

enzymes can be ______

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58

pH, temperature, and substrate concentration

enzymes are affected by

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59

increases

As a substrates concentration increases, the reaction speed increases/decreases up to a certain point

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60

cofactors and coenzymes

can also affect enzyme function, as some enzymes may only be active when these are present.

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61

vitamins

most coenzymes are

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62

minerals

most cofactors are

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