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Neutral Atoms
have the same number of protons and electrons
Ions
charged particles, unbalanced
Oxidation
Loss of electrons
Reduction
gain of electrons
Elements
any substance that cannot be broken down into simpler substances
Organic molecules contain primarily these elements
C,H,O,N (carbon, hydrogen, oxygen, nitrogen)
Covalent bond
A chemical bond that involves sharing a pair of electrons between atoms in a molecule
Types of covalent bonds
polar and nonpolar
polar covalent bond
unequal sharing of electrons
nonpolar covalent bond
a covalent bond in which the electrons are shared equally by the two atoms
Why is water so important to life?
It's the perfect liquid medium in which to dissolve nutrients for ingestion or wastes for excretion, to transport important chemicals. This is primarily because it is polar and able to hydrogen bond with itself, but also because it can dissolve ionic bonds.
ionic bond
A chemical bond resulting from the attraction between oppositely charged ions.
Biological Molecules contain primarily:
Carbon bonded to carbon, or carbon bonded to other molecules
dehydration synthesis
A chemical reaction in which two molecules covalently bond to each other with the removal of a water molecule. Energy RELEASE
Biologically important macromolecules
carbohydrates, lipids, proteins, nucleic acids
Macromolecules are often....
Polymers (long molecules built by linking together small, similar subunits (monomers))
Carbohydrates
molecules that contain only carbon, hydrogen, and oxygen in a 1:2:1 ratio (CH2O)
examples of carbohydrates
sugars, starches, and glucose
Monosaccharides
Single sugar molecules
Isomers
Compounds with the same formula but different structures.
Dissacharides
A sugar containing two monosaccharides, joined by a covalent bond (dehydration synthesis). Example: sucrose which is fructose + glucose.
examples of disaccharides
sucrose, lactose, maltose
Polysaccharides
long chains of sugars
examples of polysaccharides
plants starch, glycogen
What do carbohydrates do?
Transport and store energy—mostly transport disaccharides.
Alpha vs. Beta glucose, what is the difference between them, why are they important?
They are isomers of each other, meaning that they have the same molecules in them, but have different structures. The only difference between them is the location of their -H and -OH groups. However, this small change makes alpha glucose able to be digested by humans, and beta glucose basically just fiber that is unable to be digested.
Biology's Central Dogma
The transfer of information from generic material into another macromolecule, which is protein
DNA -> RNA = ?
transcription
RNA -> Protein = ?
translation
2 types of nucleic acids
DNA and RNA
Functions of DNA and RNA
Primarily specialized for storage, transmission, and use of genetic information
DNA (deoxyribonucleic acid)
Encodes information used to assemble proteins
RNA (ribonucleic acid)
Reads DNA-encoded information to direct protein synthesis.
What are nucleotides?
Monomers of Nucleic acids (basically the building blocks of them)
What are nucleotides made of?
Sugar + Phosphate + Nitrogenous base
Sugar in DNA
deoxyribose
Sugar in RNA
Ribose
All nitrogenous bases
adenine, guanine, cytosine, thymine, uracil
Examples of purines are...
Adenine (A) and Guanine (G)
examples of pyrimidines
Thymine (T), Uracil (U), Cytosine (C)
Which nitrogenous bases are used in DNA?
A, G, T, C
Which nitrogenous bases are used in RNA?
A, G, U, C
What does adenine pair with in DNA?
Thymine (T)
What does guanine pair with in DNA?
Cytosine (C)
What does adenine pair with in RNA?
Uracil (U)
What is the function of RNA?
Read DNA strand and direct protein synthesis
What is ATP?
adenosine triphosphate, the primary energy currency of the cell
What are proteins?
polymers of amino acids
What are the functions of proteins?
enzyme catalysis, defense, transport, support, motion, regulation, storage
What is an enzyme?
a protein molecule that speeds up chemical reactions, without itself being destroyed or altered upon the completion of the reaction.
What is the monomer of a protein?
amino acids (20)
What is the amino acid structure of a protein?
a central carbon atom surronded by,
- an amino group (-NH2)
- a carboxyl group (-COOH)
- single hydrogen
- variable R group
How many amino acids are there?
20 amino acids, grouped by major classes relating to their charge and polarity
What is a peptide bond?
bond between amino acids
A protein is one or more long chains of ...
amino acids joined by peptide bonds
Why does protein structure matter?
Protein function is determined by its shape
What are the different types of protein structures?
Primary, secondary, tertiary, quaternary
primary protein structure
specific sequence of amino acids
secondary protein structure
folding of amino acid chains
tertiary protein structure
folded shape of polypeptide chain
quaternary protein structure
interactions between multiple polypeptide chains/subunits
Unfolding proteins is called ...
denaturation
What is denaturation?
a structural change in a protein that results in a loss of its biological properties
What can cause denaturation?
any extreme change in temperature or pH that can affect the shape of a protein
Why do children need a more varied diet than adults?
children dont make a lot of amino acids that adults do, so they need to aquire them through food.
Lipids are
groups of molecules that contain long C-H tails, and are insoluble in water.
The two main catogories of lipids are
Fats or triglycerides, and phospholipids
Fats (triglycerides) are composed
1 glycerol and 3 fatty acids. Fatty acids are long hydrocarbon chains
What is a saturated fat?
all internal carbon atoms are bonded to at least 2 H atoms
What is an unsaturated fat?
acid in which there is at least one double bond between successive C atoms
polyunsaturated fats
contains more than one double bond
Are unsaturated fats solid or liquid at room temperature?
Liquid, because they are less dense (less hydrogen bc of double bond)
Are triglycerides good energy storage molecules?
Yes, they are an excellent souce of energy. Fats have around 9 kcal/gram while carbs have around 4
Animal fats are saturated, are they solid or liquid at room temp?
Solid, because they are more dense.
Plant fats are unsaturated, are they solid or liquid at room temp?
liquid, becuase they are less dense.
What is a phospholipid?
A molecule that is a constituent of the inner bilayer of biological membranes.
What type of head do phospholipids have?
A polar, hydrophilic head.
What type of tail do phospholipids have?
A nonpolar, hydrophobic tail.
Properties of Life
Cellular organization
Ordered complexity
Sensitivity
Growth, development, and reproduction
Energy utilization
Homeostasis
Evolutionary adaptation
What does cell theory state about living things?
All living things are made up of cells.
What is the basic unit of structure and function in living things according to cell theory?
Cells are the basic units of structure and function in living things.
How are new cells produced according to cell theory?
New cells are produced from existing cells.
prokaryotic cell
A type of cell lacking a membrane-enclosed nucleus and membrane-enclosed organelles; found only in the domains Bacteria and Archaea.
Eukaryote
A cell that contains a nucleus and membrane bound organelles (HUMANS)
saturated fats
fats that are solid at room temperature, no double bonds
unsaturated fats
A fat that is liquid at room temperature and found in vegetable oils, nuts, and seeds. DOUBLE BOND
What is the basic unit of life according to cell theory?
Cells are the most basic unit for function in all living organisms.
What are the common features of all cells?
All cells have a cytoplasm, ribosomes, and a plasma membrane.
What distinguishes prokaryotic cells from eukaryotic cells?
Prokaryotic cells lack a membrane-bound nucleus and are simpler than eukaryotic cells.
What are the two domains of prokaryotes?
Archaea and Bacteria.
What is a hallmark feature of eukaryotic cells?
Compartmentalization achieved through membrane-bound organelles and an endomembrane system.
What is the function of the nucleus in a cell?
The nucleus contains the genetic information of the cell.
What are the two types of molecules allowed through the nuclear envelope?
The nuclear envelope allows certain molecules through nuclear pores, though the specific types are not detailed in the notes.
What is the role of ribosomes in a cell?
Ribosomes are the sites of protein synthesis.
What organelles contain their own DNA?
Mitochondria and chloroplasts.
What is the primary function of mitochondria?
Mitochondria produce energy for the cell.
What process occurs in mitochondria?
Cellular respiration, converting biochemical energy to ATP.
What is the equation for cellular respiration?
C6H12O6 (s) + 6 O2 (g) → 6 CO2 (g) + 6 H2O (l) + heat + 38 ATP.
What is the function of chloroplasts?
Chloroplasts convert light energy into chemical energy through photosynthesis.
What is the equation for photosynthesis?
2n CO2 + 2n H2O + photons → 2(CH2O)n + 2n O2.