Friday, September 12th Lecture Notes

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Gel Electrophoresis

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20 Terms

1

Gel Electrophoresis

A technique used to separate charged molecules, such as proteins, in an electric field.

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2

Polyacrylamide Gels

A matrix used in gel electrophoresis to sieve protein molecules based on size and charge.

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3

Native PAGE

A type of polyacrylamide gel electrophoresis that maintains the proteins' natural state without denaturing them.

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4

Charge to Mass Ratio

A constant ratio required for proportional movement of proteins in gel electrophoresis.

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5

SDS-PAGE

A method that denatures proteins and provides a constant charge-to-mass ratio for separation based on size.

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6

Sodium Dodecyl Sulfate (SDS)

An amphipathic molecule used to denature proteins and impart a negative charge during SDS-PAGE.

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7

Mercaptoethanol

A reducing agent used to break disulfide bonds in proteins during SDS-PAGE.

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8

Isoelectric Point (pI)

The pH at which a protein has a net charge of zero and does not migrate in an electric field.

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9

pH Gradient

A stable gradient established in isoelectric focusing that influences protein migration based on their pI.

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10

2-Dimensional PAGE

A technique combining isoelectric focusing and SDS-PAGE for high-resolution separation of proteins.

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11

Proteomics

The study of the complete set of proteins (proteome) in an organism.

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12

Genome

The complete DNA sequence of an organism, containing all its genes.

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13

Transcriptome

The complete set of RNA molecules transcribed from a genome.

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14

Metabolome

The complete set of small molecules found in a cell.

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15

Protein Purification

The process of isolating a pure protein from a mixture for detailed study.

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16

Ion Exchange Chromatography

A technique that separates proteins based on their charge by binding positively charged proteins to beads.

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17

Size Exclusion Chromatography

A method that separates proteins based on size, allowing larger proteins to elute faster than smaller ones.

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18

Affinity Chromatography

A technique that uses specific binding interactions to isolate proteins with a tag.

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19

His-tag

A sequence of six histidine residues used to facilitate the purification of proteins via affinity chromatography.

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20

Overexpression

The process of increasing the production of a specific protein, often through cloning, to facilitate purification.

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