Exam 4 Lectures 21-24

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what converts Acetyl-CoA to Malonyl-CoA

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1

what converts Acetyl-CoA to Malonyl-CoA

Acetyl-CoA carboxylase

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2

what does lipoprotein lipase do

breaks down the triglycerols in the lipoproteins to smaller fatty acids and monoglycerides

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3

what do alpha cells do

secrete glucagon

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4

what do beta cells do

secrete insulin

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5

what do delta cells do

secrete somatostatin

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6

what does somatostatin do

inhibit insulin and glucagon secretion

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7

how does glucose enter beta cells

through GLUT2

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8

what triggers exocytosis

high concentration of Calcium

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9

what is type 1 diabetes

insufficient production of insulin cells

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10

what are characteristics of type 1 diabetes

due to autoimmune destruction of beta cella develops early in life

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11

what is type 2 diabetes

insulin resistance

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12

what are characteristics of type 2 diabetes

develops in late adulthood associated with obesity

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13

what are the symptoms of both types of diabetes

blood sugar becomes elevated body tries to dilute the glucose --> excessive urination and thirst

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14

what is a symptom of type 1 diabetes

fat breakdown is accelerated --> leads to high production of ketone bodies some of the ketones are ketoacids, raise blood [H+] leads to ketoacidosis

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15

what is a high fasting blood glucose level

126 or higher

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16

what is a low fasting blood glucose level

50 in men or 40

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17

what are the long- term effects of elevated blood sugar

increased risk of CV disease, renal failure, and damage to small blood vessels and nerves

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18

what do adipose tissues release

peptide hormones called adipokines

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19

what do adipokines do

carry information about fuel stores to the brain includes leptin and adiponectin

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20

what is leptin

an appetite suppressant and stimulates production of anorexigenic hormones

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21

what NT does leptin inhibit

neuropeptide Y

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22

what NT does leptin activate

alpha-MSH

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23

what is neuropeptide Y

an orexigenic sends signal to eat levels rise in starvation inhibited by leptin and insulin

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24

what is alpha-MSH

an anorexigenic sends signal to stop eating

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25

JAK-STAT mechanism

leptin binds to leptin receptor monomer activates the dimerization of the the leptin receptor travels into the nucleus and induce transcription

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26

what percent of diabetes cases are type 2

90%

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27

what are symptoms of insulin resistance

high triglycerides low HDL high blood pressure elevated blood glucose

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28

what are the nucleotide functions

energy for metabolism (ATP) enzyme cofactors (NAD+) signal transduction (cAMP)

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29

what are the nucleic acid functions

storage of genetic info (DNA) transmission of genetic info (mRNA) processing of genetic information (ribozymes- ribo nucleic acid enzymes) protein synthesis (tRNA and rRNA)

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30

what is a nucleotide

nitrogenous base pentose phosphate

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31

what is a nucleoside

nitrogenous base pentose

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32

what is a nucleobase

nitrogenous base

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33

what are nucleobases

derivatives of pyrimidine or purine

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34

at what nm do nucleobases absorb

250-270 nm

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35

what are the pyrimidines

C, T, U

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36

what are the purines

A and G

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37

how are nucleotides in the pentose ring attached to the nucleobase

N-glycosidic bond

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38

why is the N-glycosidic bond formed

to position N1 in pyrimidines to position N9 in purines

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39

what modification is common in eukaryotes but also found in bacteria

5-Methylcytosine

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40

what modification is common in bacteria only

N6-methyladenosine

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41

what are epigenetic markers

way to mark own DNA so that cells can degrade foreign DNA (prokaryotes) way to mark which genes should be active (eukaryotes)

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42

how many H-bonds to A-T linkages have

2

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43

how many H-bonds to G-C linkages have

3

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44

what does monocitronic mean

one promoter controls expression of one gene

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45

what does polycistronic mean

one promoter controls expression of multiple genes

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46

are eukaryotes monocistronic or polycistronic

monocistronic

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47

are prokaryotes monocistronic or polycistronic

polycistronic

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48

what do palindromic sequences of DNA form

hairpins and cruciforms

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49

how is denaturation of DNA induced

high temperature or change in pH

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50

how is DNA denaturation reversed

annealing

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51

what does a southern blot do

detect DNA from toxins

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52

what does a northern blot do

detect RNA

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53

what does a western blot do

use antibody to detect protein

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54

what are the spontaneous DNA mutations

deamination- very slow reaction depurination- N-glycosidic bond is hydrilyzed

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55

what are the chemical mutations

oxidative damage- hydroxylation of guanine, mitochondrial DNA is most succeptible chemical alkylation- methylation of guanine

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56

what are the radiation- induced mutations

UV light- induces dimerization of pyrimidines ionizing radiation- causes ring opening and strand breaking

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57

what are the RNA viruses

COVID and HIV

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58

what do bacteria contain

extra-chromosomal, double-stranded circular plasmids plasmid exchange is one way bacteria acquire antibiotic resistance

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59

how many chromosomes do humans have

46 chromosomes

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60

what percent of our DNA encodes for proteins

1.5%

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61

what are viral genomic DNA associated with

capsid proteins

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62

what are exons

expressed sequences of DNA

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63

what are introns

regions of genes that are transcribed but not translated

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64

what are transposons

sequences of DNA that can move around account for ~50% of the human genome

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65

what are simple sequence repeats

short (10bp or less) sequences repeated millions of times

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66

what is the telomere repeat sequence in humans

TTAGGG

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67

how are telomeres associated with cellular aging

telomeres are shortened after each round of replication human cells divide about 52 times before losing the ability to divide again

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68

what is chromiatin

fibers of protein and DNA and small amount of RNA

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69

what are histones

small proteins with lots of basic (Lys, Arg) residues

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70

how are histones modified

methylation, acetylation, ADP-ribosylation, phosphorylation, glycosylation, sumoylation, ubiquination

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71

how much DNA is wrapped around a histone

beads are ~146 bp of DNA wrapped around 8 histones

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72

what are the higher order structures of nucleosomes

solenoid model and zigzap model

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73

which way does DNA synthesis occur

addition of new nucleotides to the 3' end

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74

how are Okazaki fragments spliced together

by DNA ligase

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75

what are exonucleases

cleave bonds that remove nucleotides from the ends of DNA

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76

what are endonucleases

cleave bonds within a DNA sequence

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77

what is a primer

short strand complementary to the template contains a 3-OH' to begin the first DNA polymerase-catalyzed reaction

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78

what is processivity

the number of nucleotides added before dissociation

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79

what does DNA polymerase 1 do

is abundant but is not ideal for replication, primary function is to clean up

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80

what does DNA polymerase 3 do

is the principle replication polymerase

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81

what do DNA polymerases 2, 4, and 5 do

they are involved in DNA repair

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82

what does DNA polymerase 1 also do

moves ahead of the enzyme, hydrolyzes things in its path does nick translation this activity is in the Klenow fragment

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83

how many subunits doe DNA polymerase 3 have

10

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84

what is a replisome

the set of enzymes and proteins required for DNA replication in E. coli

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85

what is included in a replisome

helicases, topoisomerases, DNA-binding proteins, primases, DNA ligases

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86

what is oriC

initiation of replication in E. coli contains A-T rich DNA unwinding elements

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87

what makes the RNA primer

primase

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88

what adds nucleotides to the leading strand

DNA pol 3

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89

does the same DNA pol 3

yes, the DNA of the lagging strand loops around

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90

what brings the okazaki fragments together

DNA ligase

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91

how does replication get terminated

replication forks meet at a region with 20bp sequences: Ter

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92

what is Ter

a binding site for the protein Tus

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93

how quickly does eukaryotic replication occur

slowly, ~50 nucleotides/ sec 20x slower than E. coli

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94

how many DNA polymerases are used in Eukaryotic replication

3

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95

what does DNA polymerase alpha do

probably used to make primers for Okasaki fragments

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96

what does DNA polymerase delta do

used in leading and Okasaki synthesis

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97

what does DNA polymerase epsilon do

used in DNA repair

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