IB Bio - Molecular Biology

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64 Terms

1

monomer

building bricks that join together to form larger structures called polymers

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2

metabolism

all the enzymatic reactions that take place inside a living organism

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3

anabolism

synthesis of complex molecules from simpler molecules; requires input of energy

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4

catabolism

the breakdown of complex molecules into simpler molecules and includes the hydrolysis of macromolecules into monomers

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5

hydrolysis reaction - catabolic

the breakdown of chemical bonds by the addition of water molecules; water is consumed

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6

condensation reaction - anabolic

the reaction in which two smaller organic molecules combined to form a larger molecule with the accompanied formation of water or some other simple molecule

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7

urea

CO(NH2)2; an organic compound used by the human body to excrete nitrogen; non-toxic and highly soluble

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8

Friedrich Wöhler

artificially synthesized urea in 1828

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9

vitalism

the idea that living organisms are fundamentally different from non-living organisms because they have a “vital force”

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10

why was the artificial synthesis of urea significant?

it helped falsify the theory of vitalism by proving that the artificial synthesis of urea from inorganic chemicals was possible

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11
<p>hydrolysis reaction - catabolic</p>

hydrolysis reaction - catabolic

amino acid

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12
<p></p>

ribose

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13
<p>urea</p>

urea

CO(NH2)2; an organic compound used by the human body to excrete nitrogen; non-toxic and highly soluble

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14
<p>Friedrich Wöhler</p>

Friedrich Wöhler

artificially synthesized urea in 1828

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15
<p>vitalism</p><p></p>

vitalism

the idea that living organisms are fundamentally different from non-living organisms because they have a “vital force”

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16

why was the artificial synthesis of urea significant?

it helped falsify the theory of vitalism by proving that the artificial synthesis of urea from inorganic chemicals was possible

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17

hydrolysis reaction - catabolic

the breakdown of chemical bonds by the addition of water molecules; water is consumed

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18

condensation reaction - anabolic

the reaction in which two smaller organic molecules combined to form a larger molecule with the accompanied formation of water or some other simple molecule

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19

thermal properties of water

evaporating water makes it break H-bonds and release energy and heat;therefore, it is a coolant

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20

artificially synthesized urea in 1828

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21

vitalism

the idea that living organisms are fundamentally different from non-living organisms because they have a “vital force”

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22

why was the artificial synthesis of urea significant?

beta glucose

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23

cohesion

the tendency of water molecules to stick to each other due to the hydrogen bonding

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24

organic compound

a compound that contains carbon and is found in living things

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25

carbohydrates

  • most abundant carbon compound found in nature

  • composed primarily of C, H, and O

  • functions as a source of energy

  • ex. glucose, glycogen, starch, cellulose

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26

universal solvent

all cellular reactions take place in liquid and rely on water to dissolve reactants

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27

proteins

  • make up over 50% of dry wall cells

  • composed of C, H, N, O, and occasionally S atoms

  • major regulatory molecules involved in catalysis

  • ex. muscle, antibodies, enzymes, collagen

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28

nucleic acid

  • genetic material of all cells

  • determines the inherited features of an organism

  • chains

  • formed from nucleotides

  • ex. DNA, RNA

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29

2 purposes of metabolic reactions

  1. to provide a source of energy for cellular processes

  2. to enable the synthesis and assimilation of new materials to use within the cell

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30

substances that can dissolve in water

glucose, amino acids, sodium chloride, oxygen (low)

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31

Friedrich Wöhler

artificially synthesized urea in 1828

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32

why do water and methane have different thermal properties

polarity of water and its capacity to form intermolecular hydrogen bonds

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33

how do lipids travel through the bloodstream

they form complexes with proteins (lipoproteins)

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34

how does methane differ from water

  • gas

  • non-polar

  • low boiling and melting point

  • low SHC and LHV

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35

monosaccharide

a monomer of a carbohydrate that primarily functions as an energy source

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36

polysaccharide

monosaccharides that are covalently joined together by glycosidic linkages to form polymers

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37

cellulose (plant cell wall)

component of plant cell wall; linear molecules make of beta glucose subunits; subunits bound in a 1-4 arrangement

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38

starch (energy storage in plants)

energy source in plants; composed of alpha glucose subunits and exist in two forms, amylose and amylopectin

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39

amylose

linear (helical) alpha glucose subunits that is bound in 1-4 arrangements in starch

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40

amylopectin

branched (1-4 & 1-6 arrangement) alpha glucose subunit in starch

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41

glycogen

branched molecules composed on alpha glucose subunits; energy storage in animals

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42

lipids

a glass of non-polar organic molecules that includes triglycerides, phospholipid, cholesterol, and steroids

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43

triglycerides

lipids used for long-term energy source that contain 1 glycerol and 3 fatty acids. two main types are fat and oils

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44

what are fatty acids

long hydrocarbon chains found in certain lipids that are principally found in triglycerides and phospholipids

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45

saturated fatty acids

  • possess no double bonds in the hydrocarbon chain

  • are generally solid at room temperature

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46

unsaturated fatty acids

  • possess double bonds

  • are generally liquids at room temperature

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47

health problems of trans fats

  • increases LDL (takes cholesterol to the arteries)

  • decreases HDL (rids cholesterol)

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48

polypeptides

amino acids linked by condensation reaction to create a macromolecule

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49

synthesis of polypeptides takes place in..

ribosomes

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50

how many different types of amino acids are found in proteins

20

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51

primary structure of proteins

  • the sequence of amino acids in a protein

  • defines all aspects of structure and function

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52

secondary structure

  • involved the folding of chains on themselves to form alpha helices or beta pleated sheets

  • formed by hydrogen bonding between the carboxyl group) and the amine group of the amino acid

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53

tertiary structure

  • 3D arrangement of a polypeptide

  • forces responsible for the formation of the tertiary structure are: hydrogen bonds, ionic bonds, disulfide bond, etc.

  • these bonds form between the different R groups of the amino acid chains

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54

quaternary structure

  • more than 1 tertiary structure bonded together in a multi-subunit complex

  • can also include non-amino groups known as prosthetic groups like metal ions, sugars, vitamins

  • ex. hemoglobin and rubisco

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55

proteomes

an organism’s unique set of proteins that are influenced by the genome

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56

globular proteins

  • spherical mass with a specific 3D shape

  • they fold up so that hydrophilic groups are on the outside and hydrophobic groups are on the inside

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57

fibrous proteins

  • form long chains or fibres

  • their fibrous nature makes them insoluble in water therefore useful for structure and support

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58

denaturation

the process in which some proteins lose their secondary and tertiary structure (and in some cases also quaternary) because of rising temperatures or pH of the surroundings change

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59

rubisco

  • globular

  • a protein found in the fixation of carbon dioxide in plants

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60

insulin

  • globular

  • a hormone produced in the beta cells of the pancreas which is involved in glucose intake from the blood

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61

immunoglobin

  • globular

  • large Y shaped proteins also called antibodies

  • involved in fighting infections and recognizing and binding to antigens

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62

rhodopsin

  • globular

  • a protein linked to pigment that is found in the photoreceptors of the eyes

  • allows very low light intensities to be detected

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63

collagen

  • fibrous

  • a structural protein found in muscles, tendons, and ligaments

  • also occurs in the skin and bones where it prevents tearing and fracturing

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64

spider silk

  • fibrous

  • a protein produced by spiders for their webs

  • it can be extended and is very resistant to breaking

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