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Pneumonia
an infection that inflames the air sacs in one or both lungs
air sacs may fill with fluid or pus
severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
causes coronavirus disease 2019 (COVID-19)
it leads to a range of clinical manifestation from asymptomatic cases to severe disease that can lead to acute respiratory distress syndrome (ARDS) and death
SARS-CoV-2 pathogenesis
spike proteins of this disease bind the angiotensin-converting enzyme 2 (ACE2) receptor in host cells
transmembrane serine protease 2 (TMPRSS2) cleaves the S protein to initiate viral fusion with the cell membrane
interferon signaling and immune response
SARS-CoV-2 therapies
anti-SARS_CoV-2 therapies - Paxloid and Remdesivir
monoclonal antibodies
mRNA COVID-19 vaccine
anti-SARS-CoV-2 therapies
Paxloid
Remdesivir
monoclonal antibodies (mAbs)
target the SARS-CoV-2 spike protein
shown clinical benefits in treating SARS-CoV-2 infection
Streptococcus pneumoniae
bacteria that causes 60-70% of all bacterial pneumonias
small cells arranged in pairs and short chains
Diseases caused by Streptococcus pyogenes
strep throat or pharyngitis
cellulitis
scarlet fever
streptococcal toxic shock syndrome
impetigo
rheumatic fever
necrotizing fever
post-streptococcal glomerulonephritis
Group A Streptococcus
one of the most important causes of acute upper respiratory tract infection
common cold
causes by adenoviruses
Flu
contagious respiratory illness caused by influenza viruses that infect the nose, throat, and sometimes the lungs
it can cause mild to severe illness, and at times can lead to death
best way to prevent flu is by getting a vaccine each year
antigenic drift
consists of small changes (or mutations) in the genes of influenza viruses that can lead to changes in the surface proteins of the virus, HA (hemagglutinin) and NA (neuraminidase)
antigenic shift
an abrupt, major change in a flu A virus, resulting in new HA and/or new HA and NA proteins in flu viruses that infect humans
antigenic drift
antigenic shift
two ways the influenza virus is constantly changing
RSV (respiratory syncytial virus)
virulence factor that produces giant multinucleated cells or syncytia
mycobacteria: acid-fast bacilli
gram-positive irregular shaped bacilli
strict aerobes
acid-fast staining
aid-fast staining
certain group of bacteria is considered “acid-fast” because they resist the acid wash —> high content of mycolic acids in their cell walls
ex. mycobacteria
mycobacterium tuberculosis virulence factors
produces no exotoxins or enzymes that contribute to infectiousness
mycolic acid
cord factor
mycolic acid
gives mycobacterium tuberculosis its defense against the complement system, free radicals and phagocytosis
virulence factor
cord factor
prevents destruction of mycobacterium tuberculosis by lysosomes and increases inflammation
virulence factor
tuberculosis
predisposing factors: inadequate nutrition, weakened immune system, poor medical care, lung damage, genetics
estimate 1/3rd of population and 15 million in US carry the bacterium
highest cases: above 65 years, AIDS patients, and immigrant from Southeast Asia, Latin America, and Africa
very resistant, can survive for 8 months in the fine aerosol particles
transmitted by respiratory droptlets
mycobacterium tuberculosis
causes tuberculosis
tuberculosis
5% to 10% of infected people develop clinical disease
untreated, the disease progresses slowly
majority of these cases are contained in the lung
clinical tuberculosis types
primary
secondary
extrapulmonary
primary tuberculosis
infectious dose only 10 cells
phagocytosed by macrophages and multiply intracellularly
after 3-4 weeks, the immune system attacks, forming tubercles (tubercle: bacilli surrounded by WBCs)
2 types:
asymptomatic
progressive
types of primary tuberculosis
asymptomatic
progressive
asymptomatic primary tuberculosis
body’s immune system is strong
lymphocytes manage to contain the bacteria and the infection does not spread further
progressive primary tuberculosis
the immune system is weak
the lymphocytes cannot contain the TB bacteria and it rapidly spreads
the infected person develops symptoms and falls ill
secondary/reactivation tuberculosis
the immune system is initially strong and contains the TB bacteria, but subsequently weakens and cannot control it
the bacteria first go into a dormant state but then get reactivated and subsequently spread aggressively
secondary tuberculosis
if patient does not recover from primary tuberculosis, reactivation of bacilli can occur
tubercles will drain into the bronchial tubes and upper respiratory tract
gradually the patient experiences more severe symptoms
violent coughing, greenish or bloody sputum, fever, anorexia, weight loss, fatigue
untreated, 60% mortality rate
extrapulmonary tuberculosis
bacilli disseminate to regional lymph nodes, kidneys, long bones, genital tract, brain, and meninges
these complications are usually terminal
tubercles
granulomas with large influx of mononuclear cells into the lungs that occur in tuberculosis
tuberculosis diagnosis
in vivo or tuberculin testing —> mantoux test
x-rays
direct identification of acid-fast bacilli in specimen
cultural isolation and biochemical testing
no
is mantoux test positive means the person has tuberculosis?
mnatoux test
local intradermal injection of purified protein derivative (PPD); look for bed bump to form in 48-72 hours
tuberculosis management and prevention
6-24 months of at least 2 drugs from a list of 11
one pill regimen called Rifater (contains 3 different antibiotics)
vaccine based on attenuated bacilli strain used in other countries
C. diphtheriae pathology
2 stages:
local infection: upper respiratory tract inflammation - sore throat, nausea, vomiting, swollen lymph nodes
diptherotoxin production: target organs - primarily heart and nerves
the toxin kills healthy tissues in the respiratory system and forms dead tissue with a thick, gray coating that build up in the throat or nose that is know as “pseudomembrane” - the hallmark of respiratory diphtheria is a pseudomembrane
C. diphtheriae epidemiology
reservoir of healthy carriers; potential for diphtheria is always present
most cases occur in non-immunized children living in crowded, unsanitary conditions
acquired via respiratory droplets from carriers or actively infected individuals
C. diphtheriae pathogenesis
diptheria Toxin B part binds host cell receptor
diptheria Toxin A part enters the host cells
C. diphtheriae detection
culture
toxigenicity testing: Elk test - detection of the toxin by the immunodiffusion assay - gold standard essay
molecular test by PCR of toxin
C. diphtheriae treatment
antitoxin, penicillin, or erythromycin
C. diphtheriae prevention
toxoid vaccine series and boosters