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phenomenally high
Mutation Rate of replicating HIV is
3
How many mutations per cell division?
treat
The mutations are a huge part of why HIV is hard to
1
About _ mutation every time HIV replicates
everyday
On average every possible mutation at every position in the HIV genome is predicted to occur
flu season
There is more genetic diversity within a single HIV+ individual than an entire
massively diverged
Since the start of the HIV-1 group M pandemic (early 1900s) HIV sequences have
Consequences for how our immune system is going to respond, Important consequences for antiviral therapy
HIV-1 genetic diversity globally is HUGE
Can quickly gain resistance via adaptation
What are the consequences of mutation on antiviral therapy?
host cell chromosomes
Retroviruses stably integrate their DNA into
life of the cell
Once integrated the virus remains for the
Persistance, Latency
What are the important consequences of integration?
Persistance
infection is not easily cleared because there is a long-lived reservoir of infected cells
latency
integrated, but silent proviruses are not seen by the immune system
cell division
Cells that are infected pass these genomes onto daughter cells during
chronic
HIV is
HIV Viral Lifecycle Part, Assembly & Release
The integrated provirus directs the creation of
new RNA viral genomes (by transcription) and
new viral proteins (by translation)
HIV Protease cuts up a precursor protein (e.g.,
Pol) into its smaller functional proteins (e.g.,
reverse transcriptase, protease, integrase)
New viral particles are then assembled and
then are released from the cell to infect new
cells (“budding”)
protease
HIV virions are not infectious until they are processed by
acute, chronic
HIV infection has 2 stages:
virus
During the acute phase there is lots of
stabilize
after the acute phase the virus is able to
flu-like symptoms, 2 to 4 weeks after infection, Lasts for a few days or a few weeks
Acute HIV infection
50-90%
How many people with acute HIV experience flu-like symptoms?
severe immunodeficiency → AIDS (opportunistic infections)
Chronic infection
normal
For many years the CD4 levels are relatively
direct killing by virus, immune mechanisms
CD4 T cells are lost during HIV infection in 2 ways
8-12
Around ____ years of infection CD4 cells begin to go away
crash
When the CD4 cells are dwindling your whole immune system starts to
helper CD4 T cells
AIDS is a disease of
acute infection & chronic infection
The immune system is damaged during
chronic, progressive
In untreated people, the virus is ______ and the disease is __________
opportunistic infections
Destruction of the immune system leads to
cleared (even with therapy)
Latency is the key reason why virus is not
master conductors
CD4 T-cells are the ______ __________ of the immune system
Help B-cells make antibodies, Allow the recruitment and activation of innate immune cells, Help CD8 T-cells (cytotoxic T-lymphocytes)
What do CD4+ T cells do
controlled and reaches a low level
in the chronic phase Viremia is
virus/immune responses kill them
in the chronic phase the Number of CD4+ T cells slowly declines as
immune system begins to fail
in the chronic phase CD4+ T cells reach low enough level that the
further loss of proper immune system function and opportunistic infections
in the chronic phase the Virus replicates out of control resulting in
CD4+ T cell infection → CD4+ T cell death (infection & immune system) → CD4+ T cell replacement → repeat
CD4 T cell decline is gradual and involves a cycle of
severe immunodeficiency
Eventually… immune exhaustion and immune system ‘collapse’ which is called
adaptive immune system
AIDS is the result of depleted CD4+ T cells and a severely
compromised
disease outcome
The amount of virus at the set point predicts
immunosuppression
AIDS is an extremely severe form of
AIDS
Opportunistic Infections are common when chronic HIV
infection progresses to
weakened immune systems
Opportunistic infections occur in people with
TB
__ is the leading case of death globally among people living with HIV
High prevalence in the same parts of the world
Opportunistic infection
Tb killed a lot of people with hiv bc hiv activated latent tb in the patient
Happens when CD4 rate comes down
Lethal synergy between HIV and TB