IAL Biology (Edexcel) Topic 2B - Proteins and DNA

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61 Terms

1

catalyst

a substance that speeds up a reaction without changing the substances produced or being changed itself

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2

enzymes

proteins that act as biological catalysts for a specific reaction or group of reactions

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3

specificity

the characteristic of enzymes that means that each enzyme will catalyse only a specific reaction or group of reactions; this is due to the very specific shapes which come from the tertiary and quaternary structures

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4

anabolic reaction

a reaction that builds up (synthesises) new molecules in a cell

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5

catabolic reaction

a reaction which breaks down substances within a cell

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6

metabolism

the sum of the anabolic and catabolic processes in a cell

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7

metabolic chain (metabolic pathway)

a series of linked reactions in the metabolism of a cell

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8

intracellular enzymes

enzymes that catalyse reactions within the cell

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9

extracellular enzymes

enzymes that catalyse reactions outside of the cell in which they were made

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10

activation energy

the energy needed for a chemical reaction to get started

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11

substrate

the molecule or molecules on which an enzyme acts

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12

lock-and-key hypothesis

a model that explains enzyme action by an active site in the protein structure that has a very specific shape; the enzyme and substrate slot together to form a complex in the same way as a key fits in a lock

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13

active site

the area of an enzyme that has a specific shape into which the substrate(s) of a reaction fit

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14

induced-fit hypothesis

a modified version of the lock and-key model of enzyme action where the active site is considered to have a more flexible shape; after the substrate enters the active site, the shape of that site changes around it to form the active complex; after the products have left the complex, the enzyme returns to its inactive, relaxed form

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15

molecular activity (turnover number)

the number of substrate molecules transformed per minute by a single enzyme molecule

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16

temperature coefficient (Q10)

the measure of the effect of temperature on the rate of a reaction

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17

denaturation

the loss of the three-dimensional shape of a protein (e.g. caused by changes in temperature or pH)

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18

initial rate of reaction

the measure taken to compare the rates of enzyme-controlled reactions under different conditions

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19

mononucleotides

molecules with three parts - a 5-carbon pentose sugar, a nitrogen-containing base and a phosphate group - joined by condensation reactions

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20

adenosine triphosphate (ATP)

a molecule that acts as the universal energy supply molecule in cells; it is made up of the base adenine, the pentose sugar ribose and three phosphate groups

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21

deoxyribonucleic acid (DNA)

a nucleic acid that is the genetic material in many organisms

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22

ribonucleic acid (RNA)

a nucleic acid which is the genetic material in some organisms and is involved in protein synthesis

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23

ribose

a pentose sugar that is part of the structure of RNA

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24

deoxyribose

a pentose sugar that is part of the structure of DNA

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25

purine base

a base found in nucleotides that has two nitrogen-containing rings

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26

pyrimidine base

a base found in nucleotides that has one nitrogen-containing ring

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27

adenine

a purine base found in DNA and RNA

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28

guanine

a purine base found in DNA and RNA

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29

cytosine

a pyrimidine base found in DNA and RNA

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30

thymine

a pyrimidine base found in DNA

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31

uracil

a pyrimidine base found in RNA

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32

nucleic acids

polynucleotides /polymers made up of many nucleotide monomer units that carry all the information needed to form new cells

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33

phosphodiester bond

bond formed between the phosphate group of one nucleotide and the sugar of the next nucleotide in a condensation reaction

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34

complementary base pairs

complementary purine and pyrimidine bases which align in a DNA helix, with hydrogen bonds holding them together (C-G, A-T)

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35

genome

the entire genetic material of an organism

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36

conservative replication

a model of DNA replication which suggests that the original double helix remains intact and in some way instructs the formation of a new, identical double helix made up entirely of new material

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37

semiconservative replication

the accepted model of DNA replication in which the DNA 'unzips' and new nucleotides align along each strand; each new double helix contains one strand of the original DNA and one strand made up of new material

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38

isotopes

different atoms of the same element, with the same number of protons but a different number of neutrons; isotopes have the same chemical properties

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39

DNA helicase

an enzyme involved in DNA replication that 'unzips' the two strands of the DNA molecules

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40

DNA polymerase

an enzyme involved in DNA replication that lines up the new nucleotides along the DNA template strands

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41

DNA ligase

an enzyme involved in DNA replication that catalyses the formation of phosphodiester bonds between the nucleotides

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42

translation

the process by which proteins are produced, via RNA, using the genetic code found in the DNA; it takes place on the ribosomes

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43

ribosomes

the site of protein synthesis in the cell

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44

triplet code

the code of three bases that is the basis of the genetic information in the DNA

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45

gene

a sequence of bases on a DNA molecule; it contains coding for a sequence of amino acids in a polypeptide chain that affects a characteristic in the phenotype of the organism

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46

codon

a sequence of three bases in DNA or mRNA

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47

messenger RNA (mRNA)

the RNA formed in the nucleus that carries the genetic code out into the cytoplasm

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48

complementary strand

the strand of RNA formed that complements the DNA acting as the coding strand

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49

non-overlapping code

a code where each codon codes for only one thing with no overlap between codons

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50

degenerate code

a code containing more information than is needed

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51

point mutation

a change in a single base of the DNA code

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52

sense strand

the DNA strand that carries the code for the protein to be produced

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53

antisense strand (template strand)

the DNA strand which acts as a template for an mRNA molecule

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54

start codon

the sequence of bases which indicates the start of an amino acid chain - TAC; this is the code for the amino acid methionine

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55

RNA polymerase

the enzyme that polymerises nucleotide units to form RNA in a sequence determined by the antisense strand of DNA

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56

stop codon

one of three sequences of bases which indicate the end of an amino acid chain

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57

transfer RNA (tRNA)

small units of RNA that pick up specific amino acids from the cytoplasm and transport them to the surface of the ribosome to align with the mRNA

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58

anticodon

a sequence of three bases on tRNA that are complementary to the bases in the mRNA codon

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59

translation

the process by which the DNA code is converted into a protein from the mRNA strand made in the nucleus

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60

transcription

the process by which the DNA sequence is used to make a strand of mRNA in the nucleus

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61

polysomes

groups of ribosomes, joined by a thread of mRNA, that can produce large quantities of a particular protein

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