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POD winter '26
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define infection
process by which a pathogen establishes a parasitic relationship with its host
define colonization
when pathogens are present in the host tissue but aren’t causing symptomatic disease
true or false: the host of an infection can cause further damage to their tissue with their immune response
true
true or false: when a host is colonized, they are able to transit the pathogen to others
true
what are 3 possible outcomes of pathogen transmission?
destruction by innate immunity; subclinical infection and destruction by adaptive immunity; clinically apparent infection with obvious injury to host
what are the 6 parts of the infectious disease chain of transmission?
pathogen, resevoir, portal of exit, transmission, portal of entry, susceptible host
define pathogenecity
the ability of the organism to initiate a disease process
what 3 things does pathogenecity depend on?
pathogen speed of reproduction, extent of damage the pathogen causes to tissue, strength of toxins released by the pathogen
define virulence
how severe of a disease a pathogen can produce, measured by what degree of mortality it causes
(virulence/pathogenicity) provides a quantitive measure of (virulence/pathogenicity)
virulence, pathogenecity
what are the 2 ways a pathogen can present in a host?
clinically symptomatic or as a carrier
what are the 5 modes of pathogen transmission?
contact, airborne, droplet, vehicle, vector-borne
define contact transmission
direct or indirect via a fomite
define airborne transmission
pathogens are propelled from one host respiratory tract to another’s respiratory tract
how small are airborne pathogens?
<5 microns
how long can airborne pathogens be suspended in the air for?
several hours
define droplet transmission
pathogens travel in larger particles up to 3 feet from their source
how large are the particles in droplet transmission?
>5 microns
define vehicle transmission
pathogen transmitted through a common source to many susceptible hosts (ie food or water)
define vector-borne transmission
pathogen uses insects or other animals as intermediaries between hosts
what are 3 very commonly known vector-borne diseases?
malaria, West Nile disease, Lyme disease
define incubation period
time between pathogen entry and appearance of clinical symptoms
when does incubation period end?
when symptoms show up in the host
define latent infection
when pathogen has replicated but remains inactive
how long can a latent infection last?
for years
what are 2 examples of diseases that can be latent infections?
tuberculosis and herpes zoster
define period of communicability
when a pathogen is shed by the host into the environment
when does the period of communicability occur?
towards the end of the incubation period
when can the period of communicability not occur?
in a latent infection
what is a virus?
a subcellular organism made up of RNA or DNA contained in a protein envelope
how are viruses classified? (5)
by size, shape, host, genome, and transmission method
true or false: viruses prefer a host cell, but don’t need one to survive
false
viruses need host cells to ______
replicate
how do antiviral medications mitigate viral illness?
by impairing viral replication
what does gram staining tell us about the bacteria?
which antibiotics will work on that strain
what are bacteria
single-celled organisms with cell walls that can grow independently
how are bacteria classified? (3)
shape, response to staining, need for oxygen
mycoplasmas are a sub-class of _______
bacteria
what are the differences between bacteria and mycoplasmas?
mycoplasmas need a host for nutrition and have no cell wall
mycoplasmas can pass through many bacteria-retaining filters. why?
they are smaller than most bacteria
what are rickettsiae
a small, gram-negative obligate, specific type of bacteria
how to rickettsiae transmit themselves?
via insect bites
true or false: rickettsiae require a host for replication, unlike other bacteria
true
what are chlamydiae
a type of gram-negative, anaerobic bacteria
chlamydiae are (larger/smaller) than rickettsiae but (larger/smaller) than viruses
smaller, larger
what are the 3 subtypes of bacteria we learned about and what do they all have in common?
mycoplasma, rickettsiae, and chlamydiae; all need host for survivalrepl
what do chlamydiae need their host for?
replication
true or false: chlamydiae is not susceptible to antibiotics
false
chlamydiae contain (DNA/RNA/both)
both
what is a protozoa
single celled or group of undifferentiated cells loosely held together with no cell walls
what is an examples of protozoa?
parasitic worms
what are fungi?
unicellular to filamentous organisms with nuclei and cell walls
define mycoses
fungi that infect humans
what is a type of mycoses that lives in the soil in central California and can cause neurological symptoms?
valley fever
what are 2 categories of fungi?
yeasts and molds
what is a prion?
infectious particles consisting of proteins but without nucelic acids
how are prions transmitted?
direct contact with infected tissue
what does “prion disease” cause? what is a well-known example?
mis-folding of normal prion proteins in the brain; mad cow disease
what is the name of an acquired prion disease?
transmissible spongiform encephalopathy
true or false, prion disease can be inherited
true
true or false: prions have a long latent period in the host
true
what are healthcare associated infections?
infections developed by a patient in a healthcare facility that was not present before admission
HAIs affect __ in __ hospitalized people in the US
1, 31
what are 5 causes of HAIs?
invasive monitoring devices, increased exposure to drug-resistance bacteria, exposure to more personnel, greater prevalence of comorbities, poor hand hygeine
What are CLABSIs
central line-associated bloodstream infections
how does a CLABSI develop?
colonization of the device internally or externally
what are the 4 mechanisms of getting a CLABSI?
skin pathogens entering catheter tract; intraluminal contamination with catheter hub manipulation; secondary bloodstream infection contamination; catheter tainted by contaminated infusate
what is a CAUTI?
catheter-associated urinary tract infection
what percentage of CAUTIs are due to indwelling catheters?
70-80
the risk of morbidity of CAUTIs increases with:
more frequent catheter use
how does a CAUTI develop?
biofilm develops around indwelling catheter, causing bacteriuria
which openings can introduce pathogens to a catheter system?
any of them
an external female catheter may reduce CAUTIs, but it does increase:
yeast infections (fungal infection)
what is VAP?
ventilatory-associated pneumonia
define VAP
pneumonia occurring 48-72 hours after endotrachial intubation
what are the 3 criteria of VAP along with the timeline?
signs of infection, gram stain-positive purulent secretions, quantitative growth of pathogen
VAP occurs in what percentage of patients with mechanical ventilation?
5-10
how can PTs help prevent VAP?
early mobilization to reduce duration of mechanical ventilation
what angle should the HOB be to avoid aspiration with VAP?
30-45 degrees
how can an endotracheal tube increase risk of VAP?
prevents closure of epiglottis and thus allows bacterial biofilm to enter the lungs
what is an SSI
surgical site infection
what percent of all HAIs are SSIs?
20%
what are 3 modifiable risk factors for SSIs?
glucose control, obesity, smoking
when you see red streaks, what is that indicative of?
acute lymphangitis
what are petechial lesions
burst capillaries become open sores
what are 6 causes of fever?
hypothalamic abnormalities, brain tumors, dehydration, toxins, infection, immune system response
what populations may not develop a fever in the presence of a serious infection?
older, immunocompromised, or have an HAI
what signs might someone who does not present with a fever present with?
tachypnea, confusion, hypotension
what are the 3 steps to pyrogenic induction of fever?
infection by pathogen, macrophage release of IL-1, hypothalamic heat conservation
what does IL-1 do?
stimulates synthesis of prostaglandin
what does prostaglandin synthesis lead to?
increased “set point” for hypothalamic temperature regulation
why is a fever created?
to make the body an inhospitable environment for the pathogen to be in
what are the 4 types of fever patterns
intermittent, remittent, sustained/continuous, recurrent/relapsing
what is the time frame for intermittent fever?
returning to normal at least once in 24 hours
what are remittent fevers associated with?
upper respiratory infection
what are 5 non-infectious causes of prolonged fever?
drug reaction, pulmonary emboli, neoplasm, tissue necrosis, autoimmune disease
define immunosenesce
immune system declining as you age
what is the root of most of the issues with immunosenescence
degradation of the thymus
what can decreased function of regulatory T cells cause?
low-grade chronic inflammation
what are 3 effects of degradation of the thymus?
reduced diversity of circulating T cells, less stimulation of B cells, reductino in diversity of B cells