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4 Basic Steps of binary fission
1. Growth of cell size
2. Replication of DNA
3. Division of cytoplasm
4. Septum formation & cell division
Z Ring Assembly
FtsZ assembles Z ring to form divisome
Generation Time
time it takes to double the population
Lag Phase
Cells adjust to culture medium; no change in population
What factors determine the duration of the lag phase?
Genetic makeup, media composition, initial inoculum size
During which phase of the growth curve is it most appropriate for the use of antibiotics?
Log phase
Following the death phase of the growth curve, ____ cells are considered the surviving cells & are considered clinically important due to their association with chronic infections, such as Tuberculosis.
Persisters
Log Phase
Binary fission occurs; cell replication > cell death
Stationary Phase
Resources become depleted; cell respiration=cell death
Death Phase
Endospores can form; cell replication < cell death
Close System Cultures
Have finite resources
Open System Cultures
-Nutrients and air are replenished
-Dead cells and waste are removed
-Beneficial for industrial microbiology
Microscopic Cell Count
Cells are counted under a microscope using a laser etched slide
In using the direct microscopic cell count method, you will be able to distinguish between live vs dead cells.
False
Fluorescence Staining
Cells are counted under a microscope or flow cytometer
In fluorescent staining, the end product results in live cells staining ___________?
Green
In fluorescent staining, the end product results in dead cells staining ___________?
Red
Coulter counting
Detects electrical resistance change due to cell density
Viable Cell Counts
Samples are diluted and grown on solid media
What type of cells are counted when using the viable plate count method?
Living
Countable Range
30-300 CFU/ml
Optical Density
-Measured with spectrophotometer
-Light is passed thru culture and measured on other side
Which method of measuring growth is considered an indirect approach?
Optical density
Which method of measuring growth can be used on living or dead cells?
Fluorescent stain
How is the pour plate technique set up?
The sample is mixed with a warm agar ranging from 45-50 C, poured onto sterile plated and swirled to mix
How is the spread plate technique set up?
The sample is poured onto a solid medium and spread using a L spreader
What cell counting method is used for counting colonies from drinking water?
Membrane filtration
What method of measuring growth is used in food/water testing?
MPN (most probable number)
Steps of Biofilm Formation
1. Attachment of planktonic cells
2. Cells become sessile
3. Growth & Division on substrate
4. Production of extracellular polymeric substance
5. Attachment of secondary colonizers & dispersion
Quorum Sensing
Cell to cell communication regarding cell density
What is the term that refers to the small molecules that allow microbes to detect cell density in a biofilm?
Autoinducers
What is EPS composed of?
Hydrated polysaccharide gel, other macros & channels
How is EPS used in a biofilm?
It is secreted by the organisms
When using the optical density method, when the bacteria increases, turbidity________?
Increases
Which pattern of growth is often observed in actinomycetes and anaerobic, gram-positive bacteria?
Fragmentation
Where is biofilm formation typically found?
Liquid environments; rivers, pipelines, oral cavities
When is MPN used?
When counts are lower than 30 CFU/ml
What two classes make up signaling molecules?
1. N-actuated homoserine lactones
2. Various short peptides
Where can the signaling molecule, N-acylated homoserine lactones, be found?
Gram negative bacteria
Where can signaling molecules, such as a variety of short peptides, be found?
Gram positive bacteria
What is considered a "good" type of biofilm found in the human body?
Normal biota in the lungs
What is considered a "bad" type of biofilm found in the human body?
Plaque on teeth
Obligate Aerobes
must have oxygen to survive
Obligate Anaerobes
will die in the presence of oxygen
Facultative Anaerobes
Can live without oxygen, but prefer it
Aerotolerant Anaerobes
Tolerant of oxygen, but don't use it
Microaerophiles
require 1-10% oxygen levels to function
What does FTM stand for?
Fluid Thioglycollate Medium
What does FTM test for?
The oxygen requirement of a certain bacteria, with the use of agar tube
How is aero tolerance of a bacteria determined?
Growth location in test tube
What bacterial species consists of obligate anaerobes?
Bacteroides
What bacterial species consists of obligate aerobes?
Micrococcus luteus
What bacterial species consists of facultative anaerobes?
Staphylococcus
What bacterial species is considered aero tolerant?
Lactobacillus
What species consists of microaerophiles?
Campylobacter
What are the main factors that affect growth?
Oxygen level, pH, temperature, osmotic pressure, barometric pressure
What macro is most affected by pH?
Proteins
What type of microbe is most adapted to a pH that is acidic?
Fermenters
Which groups of bacteria are considered neutrophiles?
E.coli, staphylococci, salmonella
Which groups of bacteria are considered acidophiles?
Fermenting bacteria; proteins/phospholipids
What group of bacteria is considered alkaliphiles?
Vibrio cholera
Neutrophiles
Optimal pH around 7
Acidophiles
Optimal pH < 5.5
Alkaphiles
Optimal pH is 8-10.5
What temperature do mesophiles require to grow?
Prefer room temp. (20-40C)
What temperature do Psychotrophs require for growth?
Prefer cooler temp. (4-20C)
What temperature do psychrophiles require for growth?
permanently cold temps. (<0C)
What temperature do thermophiles require for growth?
Prefer hot temp. (50-80C)
What temperature do Hyperthermophiles require for growth?
Extreme hot temp. (80-110C)
What are psychotrophs responsible for?
Refrigerated food spoilage
Where are mesophiles found?
Human body
Where can psychrophiles be found?
cold waters, bottom of the ocean
Where can thermophiles be found?
Compost piles, hot springs, soils
Where can hyperthermophiles be found?
Hyperthermal ocean vents
Halophiles
Salt/solute lovers; found in oceans
Halotolerant
Tolerate high salt, but don't need it; found in salt marshes where high solutes aren't present all the time
What bacterial species is considered Halotolerant and is an important cause for foodborne illness?
Staphylococci
Where are Barophiles found?
Bottom of the ocean
What type of microbes depend on light for growth?
Photoautotrophs, photoheterotrophs
What type of bacteria is considered photoautotrophs?
Cyanobacteria, green sulfur
What type of bacteria is considered photoheterotrophs?
Purple nonsulfurs
What is the difference between selective media and differential media?
Selective SELECTS the organism for growth while inhibiting all others
Differential causes all present organisms to grow, but is able to differentiate fermenters vs Non via color change
Sterilization
Removal/killing of all mircrobes
Disinfection
Inactivation of microbes, removal of some on fomite
Antisepsis
Acts on microbes, but not tissue; safe on skin
Degerming
Reduces microbial load on living tissue with use of mechanical process
Sanitization
Decreasing microbial load on fomite with use of heat/chemicals
Antiseptic technique is used to prevent contamination of a sterile environment.
True
What are the most prominent methods of sterilization used?
Heat, pressure, filtration, chemical
examples of disinfectants
Vinegar, bleach
examples of antiseptics
alcohol, hydrogen peroxide
Which biosafety level poses as a moderate risk and requires restrictive access?
BSL-2
Which biosafety level can cause potential lethal infections by inhalation and require directional air flow?
BSL-3
What indigenous pathogens can be found in a BSL-3?
TB, anthrax, West Nile, HIV
What indigenous pathogens can be found in a BSL-4?
Ebola, Marburg, smallpox
What biosafety level is appropriate for Salmonella?
BSL-2
Critical
Must be sterile; items contact sterile tissue (in body)
Semicritical
Do not require high level sterilization; items might contact non-sterile tissue, no penetration
Noncritical
Do not require sterilization; items contact but do not penetrate
What medical tools can be considered critical?
surgical instruments, cathedar, IV