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Gastrointestinal (GI) tract organs
mouth, pharynx, esophagus, stomach, small intestine, large intestine
Accessory organs of the digestive system
teeth, tongue, salivary glands, liver, gallbladder, pancreas
GALT (gut associated lymphoid tissue)
-immune response within GI tract
-Peyer's patches (lymphoid nodules) in lining of small intestines
-Lymph nodes
Normal Microbiota of the digestive system
Millions of bacteria per ml of saliva
Few in stomach (due to HCl)
Large numbers in large intestine (anaerobes and facultative anaerobes)
100 billion bacteria per gram of feces
Paneth cells
Phagocytic cells that secrete defensin enzymes that kill bacteria
Dental plaque
Biofilms involved in the formation of dental caries
Streptococcus mutans
Causes dental caries; gram-positive coccus; converts sucrose to lactic acid and produces dextran that forms plaque
Cariogenic bacteria
S. mutans, streptococci, filamentous Actinomyces
Dental Caries (Tooth Decay)
Starts with decay in enamel that then becomes advanced decay
Penetrates enamel into dentin
Decay reaches pulp
Can advance to soft tissues and cause abscess
Correlated with sugary diet that increases lactic acid production
Gingivitis
Inflammation/infection of the gums
Caused by streptococci, actinomycetes, and anaerobic gram-negatives
Periodontitis
Inflammatory disease of the bone and supporting tissues of the teeth
Caused by Porphyromonas
Acute necrotizing ulcerative gingivitis (trench mouth)
Infection producing ulcers in the mucous membranes of the mouth and throat
Caused by Prevotella intermedia
Staphylococcal food poisoning
Staphylococcal enterotoxicosis caused by S. aureus enterotoxin type A; coagulates plasma, heat stable, causes nausea, vomiting, diarrhea
Temperature abuse
When a food is either left in the temperature danger zone for an extended period of time, or does not reach its safe internal temperature; S. aureus outgrows most bacteria, especially in high osmotic pressure and temperature; common in creamy or salty foods
Shigellosis (Bacillary Dysentery)
Caused by the genus Shigella (facultatively anaerobic; gram-negative); produces Shiga toxin that damages tissue leading to bacillary dysentery: inflammation of intestines, fever, diarrhea, nausea, cramps, vomiting
Small infectious dose
Attaches to M cells, invades, and spreads to other cells and bloodstream
Treated with fluoroquinolones and oral rehydration
Dysentery
infection of the intestines resulting in severe diarrhea with the presence of blood and mucus in the feces.
Salmonellosis (Salmonella Gastroenteritis)
Salmonella enterica
Gram-negative, facultative anaerobe, nonendospore-forming rods
Normal inhabitant of the human intestinal tract
2000 serotypes
Invades intestinal mucosa and multiplies
Passes through M cells and enters the lymphatics
Replicates in macrophages
Salmonellosis symptoms
Incubation of 12 to 36 hours; fever, nausea, pain and cramps, diarrhea
Salmonellosis - risk factors
Consumption of undercooked chicken and eggs; bacteria survive in egg albumin; can cross-contaminate vegetables
Salmonellosis diagnosis and treatment
Diagnosis: Stool sample (microscopy and culture) or PCR
Treatment: oral rehydration therapy
Typhoid fever cause
Salmonella serotype Typhi (S. typhi); spread fecal-oral route; bacteria multiply in phagocytes and spread through blood
Typhoid fever symptoms
High fever, headache, intestinal wall ulceration; 1-3% become chronic carriers (gallbladder)
Typhoid fever treatment
Ceftrioxone, azithromycin
Cholera cause
Vibrio cholerae: gram-negative curved rod with polar flagellum; lives in salty water; produces cholera toxin that causes host cells to secrete electrolytes and water
Cholera symptoms
After drinking contaminated water:
-High volume watery diarrhea (up to 1 Liter per hour)
-Rice water stool
-Dehydration that can lead to shock, collapse, organ failure, and death
-No fever
Cholera treatment
IV fluid replacement
Noncholera vibrios
Vibrio parahaemolyticus: found in saltwater estuaries; common cause of gastroenteritis
Outbreaks associated with raw oysters and crustaceans
Require early antibiotic therapy
Enteropathogenic E. coli (EPEC)
Diarrhea in developing countries
Cause the host cells to form pedestals where the bacteria attach
Enteroinvasive E. coli (EIEC)
-diarrhea with pus
-similar to shigella
Enteroaggregative E. coli (EAEC)
Produce an enterotoxin causing watery diarrhea; only found in humans
Enterohemorrhagic E. coli (EHEC)
Produces Shiga-like toxin that is released upon the cell's lysis
Most outbreaks are O157:H7
Cattle are the main reservoir; also water and veg
Causes hemorrhagic colitis and hemolytic uremic syndrome
Diagnosed by the inability to ferment sorbitol and pulsed-field gel electrophoresis
Treated with IV rehydration and electrolytes
Hemorrhagic colitis
Abdominal cramps and bloody diarrhea, without fever, attributed to infection by a strain of E. coli.
Hemolytic uremic syndrome
A condition in which hemolytic anemia and thrombocytopenia cause acute renal failure and possibly death
Traveler's Diarrhea
Causes: most commonly ETEC, second EAEC; also Salmonella, Shigella, Campylobacter
Treatment: oral rehydration, bismuth and other OTC antidiarrheals
Campylobacteriosis
Caused by C. jejuni (gram-negative spiral curved microaerophilic); leading cause of foodborne disease in US (poultry, cattle feces, milk)
Symptoms: fever, cramping, abdominal pain, diarrhea, dysentery; rarely (1/1000) leads to Guillain-Barre syndrome
Helicobacter Peptic Ulcer Disease
Caused by H. pylori - grows in stomach by producing urease that converts urea to ammonia; disrupts stomach mucosa causing inflammation
Treatment: antimicrobials and bismuth subsalicylate
Diagnosis: biopsy, culture, urea breath test
Yersinia gastroenteritis
Caused by Y. enterocolitica and Y. pseudotuberculosis (gram-negative); transmitted by undercooked meat and pork; grows at 4°C
Symptoms: diarrhea, fever, headache, abdominal pain (can be misdiagnosed as appendicitis)
Treatment: antibiotics and oral rehydration
Clostridium perfringens gastroentertis
Caused by C. perfringens (gram-positive endospore forming obligate anaerobic rod)
Associated with animal intestines (low oxygen)
Symptoms: mild diarrhea 8-12 hours after ingestion (can also cause gas gangrene)
Treatment: oral rehydration
Clostridium difficile
Gram-positive endospore-forming anaerobic rod found as normal microbiota of the intestine.
Precipitated by therapy with broad-spectrum antibiotics (nosocomial)
Exotoxins cause ulceration and perforation of intestinal wall leading to life-threatening colitis
Bacillus cereus
Large, gram-positive endospore forming rod common in soil and vegetation; often transmitted in rice dishes and spores survive heating
Toxins cause diarrhea, nausea and vomiting
usually self-limiting
Mumps
Virus spread through saliva, causing inflammation of parotid gland 16-18 days post-exposure; virus multiplies in respiratory tract and reaches salivary glands through blood; may cause orchitis, meningitis, ovary inflammation, pancreatitis
Prevention: MMR vaccine
Hepatitis A virus (HAV)
A nonenveloped, single stranded RNA virus
Spread through fecal-oral route and multiplies in GI tract epithelium
Diagnosed via IgM antibodies
HAV symptoms
Anorexia, malaise, nausea, diarrhea; can lead to jaundice and dark urine
Symptoms 2-21 days, low mortality
HAV treatment and prevention
Treatment: immunoglobulins
Prevention: inactivated vaccine
Hepatitis B virus (HBV)
enveloped dsDNA virus
Transmission is through the blood and body fluids
Dane particles
Complete HBV virions
Spherical and filamentous particles
HBV particles lacking DNA but containing surface antigens
HBV prevention and treatment
Prevention: vaccine from genetically modified yeast
Treatment: no specific treatment, may require liver transplant
Acute HBV
Often subclinical, similar symptoms to HAV; gradual recovery
Fulminant hepatitis
An uncommon, rapidly progressing form that can quickly lead to liver failure, hepatic encephalopathy, or death within 3 weeks
Chronic HBV
10% of infected patients; can lead to liver cirrhosis or cancer; presence of HBeAg indicates high viral replication rate; treatment: interferons and nucleoside analogs
Hepatitis C virus (HCV)
Enveloped ssRNA; transmission via blood transfusions or other blood/bodily fluid contact
Destroys liver and uses antigenic variation to evade immune system; higher mortality than AIDS in US; 85% of cases become chronic and 25% develop cirrhosis of liver
HCV treatment and prevention
Treatment: protease and polymerase inhibitors, interferon, ribavirin
Prevention: no vaccine
Hepatitis D virus (HDV)
Acute (coinfection with HBV) and chronic (superinfection) forms; prevented via HBV vaccine
Hepatitis E virus (HEV)
a virus that is transmitted through the oral-fecal route and causes a form of hepatitis similar to HAV; endemic in areas with poor sanitation
Rotavirus
-Common in children; low mortality
-2 to 3 day incubation; low-grade fever, diarrhea, vomiting
-Prevented with a live oral vaccine
Norovirus
-Caliciviruses
-Fecal-oral transmission
-Low infectious dose
-18 to 48 hour incubation; diarrhea and vomiting
-Detected with PCR and EIA tests
Mycotoxins
toxins produced by fungi
Can cause blood diseases, nervous system disorders, kidney and liver damage, and cancer
Ergot poisoning
Mycotoxins produced by Claviceps purpurea
Occurs in grains
Restricts blood flow (gangrene) and causes hallucinations
Aflatoxin poisoning
Mycotoxins produced by Aspergillus flavus
Likely to be found on peanuts
Causes liver cirrhosis and liver cancer
Giardiasis
Caused by Giardia intestinalis (aka G. lamblia)
Flagellated protozoan; cysts in feces and water and trophozoites in host that attach to intestinal wall
Giardiasis symptoms
Prolonged diarrhea, malaise, weight loss, flatulence, cramps
Hydrogen sulfide detected in the breath or stools
Giardiasis diagnosis and treatment
Diagnosed with a string test, ELISA, or FA test
Treated with metronidazole and nitazoxanide
Cryptosporidiosis
Caused by Cryptosporidium parvum and C. hominis
Ingested oocysts release sporozoites
Invade the intestinal epithelium
Transmitted through drinking water
Resistant to chlorination
Cryptosporidiosis symptoms
Cholera-like diarrhea for 10 to 14 days
Cryptosporidiosis diagnosis and treatment
Diagnosed with an FA test or immunoassay tests
Treatment with nitazoxanide
Cyclospora
Caused by Cyclospora cayetanensis; fecal-oral route; oocysts ingested
Symptoms: days or weeks of watery diarrhea
Diagnosis: no satisfactory tests
Treatment: trimethoprim and sulfamethoxazole
Amebic dysentery
Caused by Entamoeba histolytica; cysts survive stomach acid and trophozoites multiply in intestinal wall
Amebic dysentery symptoms
Perforation of intestinal wall can cause abscesses and liver infection; blood and mucus in feces
Amebic dysentery diagnosis and treatment
Diagnosed via serological EIA tests
Treatment with metronidazole
Beef tapeworm
Taenia saginata
Pork tapeworm
Taenia solium
Fish tapeworm
Diphyllobothrium latum
Taeniasis
adult tapeworm infects the intestine
Cysticercosis
Infection with the larval stage by ingesting eggs
Ophthalmic cysticercosis
Larvae of tapeworm lodge in the eye
Neurocysticercosis
Tapeworm larvae develop in the central nervous system
Tapeworm life cycle
-Eggs are excreted in the feces and ingested by
animals.
-Eggs hatch into a larval cysticercus that lodges in the muscle of the animal.
-Human ingests undercooked meat containing cysticerci, which develop into adult tapeworms in the intestine.
Tapeworm diagnosis and treatment
Diagnosis: eggs or segments in feces
Treatment: praziquantel and niclosamide
Hydatid Disease
Caused by the tapeworm Echinococcus granulosus
Eggs are ingested and migrate to the liver, lungs, or brain where they develop a hydatid cyst that can hold up to 15 liters of fluid
Cyst rupture can cause anaphylactic shock
Diagnosis with serological tests, X rays, CT, and MRI
Treatment with surgical removal or albendazole
Pinworms
Caused by Enterobius vermicularis (a small nematode) that lays eggs around the anus, causing local itching
Treatment with pyrantel pamoate and mebendazole
Hookworms
Caused by the nematodes Necator americanus and Ancylostoma duodenale
Attaches to the intestinal wall and feeds on blood and tissue
Anemia, lethargic behavior, and craving for peculiar foods (pica)
Carried from human feces in soil that contact bare skin
Treatment with mebendazole
Ascariasis
Caused by the nematode Ascaris lumbricoides
30% of the worldwide population is infected with few or no symptoms
Eggs shed in the feces and are ingested by another person
Hatch into larvae and pass into the bloodstream and lungs
Larvae migrate to the throat and are swallowed
Larvae develop into adult worms in the intestinal tract and emerge from the anus, mouth, or nose
Treatment with mebendazole or albendazole
Whipworm
Trichuris trichiura; 30-50mm long; ingested eggs invade intestinal glands; eggs hatch and grow on intestinal surfaces; adult burrows into mucosa and feeds on cells and blood
Whipworm symptoms
Symptoms: Anemia, malnutrition, retarded growth
Treatment: mebendazole or albendazole
Trichinellosis
Caused by Trichinella spiralis
Encysted larvae are ingested from undercooked pork and other meats
Digestion removes the cyst wall and the worm matures into an adult
Adults produce larvae in the intestines that invade tissues and form new cysts
Trichinellosis symptoms and treatment
Fever, eye swelling, gastrointestinal upset
Treatment with albendazole or mebendazole