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Chemistry
TCA cycle
acceptor of acetyl-CoA
generates electron carriers
30-32 ATP
brain/kidneys/heart
acetyl-CoA
ETC
acetyl-CoA production
mitochondrial matrix
mitochondrial inner membrane
pyruvate dehydrogenase complex
catalytic sites
side reactions
regulation
PDHC deficiency
thiamine pyrophosphate (TPP)
cofactor
lipoic acid
arsenic
citrate synthase
oxaloacetate
citrate
isocitrate
aconitase
alpha-ketoglutarate
isocitrate dehydrogenase
alpha-ketoglutarate dehydrogenase complex
succinyl-CoA
succinate
succinate dehydrogenase
fumarate
L-malate
fumarase
malate dehydrogenase
NADH
FADH2
GTP
anaplerotic reactions
intermediates
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functions of TCA cycle
acceptor of acetyl-CoA produced from oxidation of fuel molecules
generates electron carriers for the electron transport chain (ETC) to produce more ATP
acetyl-CoA
__ transports acetyl groups coming from fuel oxidation into TCA cycle
ETC
TCA cycle produces electron carriers used in the ___ to make 30-32 ATP molecules
acetyl-CoA production
pyruvate turned into acetyl-CoA via action of the pyruvate dehydrogenase complex
reaction NOT part of TCA cycle
preparatory step
releases CO2
mitochondrial matrix
TCA cycle enzymes are located into the ____
cytoplasm
glycolysis and the pentose phosphate pathway both happen in the __ of the cell
pyruvate dehydrogenase complex
Connects glycolysis to the TCA cycle
complex made of 3 enzymes: pyruvate dehydrogenase, dihydrolipoyl transacetylase, & dihydrolipoyl dehydrogenase
reduces NAD to NADH
very large protein complex
advantages of multienzyme complexes
short distance between catalytic sites = channel substrate from one site to another
Channeling of substrate = less side reactions
regulation of activity of one enzyme/subunit affects the entire complex
PDHC deficiency
Can be genetic, from cofactor deficiency (not enough thiamine pyrophosphate (TPP)), or due to poisoning/intoxication
leads to lactic acidosis and neurological disturbance
citrate synthase
step 1: acetyl-CoA and oxaloacetate form citrate
via ___ enzyme
uses H2O
aconitase
step 2: citrate made into isocitrate using dehydration-rehydration reaction
via ___ enzyme
reaction moves forward by removal of isocitrate
isocitrate dehydrogenase
step3: isocitrate turned into alpha ketoglutarate
via __ enzyme
reduces NAD to NADH
releases CO2
alpha-ketoglutarate dehydrogenase cpmplex
step4: alpha-ketoglutarate turned into succinyl-CoA
via __
requires acetyl-CoA
requires TPP (thiamine pyrophosphate)
releases CO2
reduces NAD to NADH
succinyl-CoA synthetase
step 5: succinyl-CoA turned into succinate
via ___ enzyme
make GTP
release acetyl-COA
nucleoside diphosphate kinase
If enough GTP and not enough ATP, GTP can be used to make ATP using the ___ enzyme and ADP.
succinate dehydrogenase
step6: succinate made into fumarate
via ___ enzyme
makes FADH2
fumarase
step7: fumarate made into L-malate
via __ enzyme
uses H2O
malate dehydrogenase
step 8: L-malate made into oxaloacetate
via ___ enzyme
reaction moved forward by removal of oxaloacetate
NADH
___ is produced by the following reactions:
isocitrate to alpha-ketoglutarate
alpha-ketoglutarate to succinyl-CoA
malate to oxaloacetate
FADH2
__ is made by the reaction turning succinate into fumarate
GTP
__ is made by the reaction turning succinyl-CoA into succinate
6, 2, 2
TCA cycle product per glucose (aka 2 pyruvate thus 2 acetyl-CoA)
__ NADH
__ FADH2
__ GTP
That is WITHOUT the acetyl-CoA production step!
anaplerotic reaction
reactions replenishing the intermediates of the TCA cycle as other pathways might use them