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Describe the main characteristics of viruses:
-Infectious
-Acellular
-Cannot be seen by light microscope (need electron microscope)
-Requires host cell to replicate
-Specific for cell type/host
Can viruses be grown in pure culture?
No
Describe viral genetic structure:
-Either DNA or RNA but never both
-Single or double stranded
-Small genome
What do viral genomes code for?
-Viral protein coat
-Proteins for nucleic acid replication (once in host cell)
-Proteins needed to get into cells
How are viruses usually classified?
-Based upon what cell type they infect (Euk/Prok)
-Ex: Bacteriophage (phage)
-Ex: Species or organ system
Explain the structure of a virus
Nucleic acid surrounded by capsid
What is a capsid?
-Protein coat surrounding virus
What is a capsomere?
-Subunits of capsid
What is a nucleocapsid?
-Capsid and nucleic acids together
What are the three shapes of viruses?
-Polyhedral/Icosahedral (20 flat triangles)
-Helical (helix)
-Complex
What is an enveloped virus?
-Virus surrounded by lipid bilayer (obtained from host cell)
-Has matrix protein b/w nucleocapsid and envelope
What is a naked virus?
-Non-enveloped virus
-More resistent to disinfectants
What are protein spikes?
-Protein structures from capsid
-Attach to receptor sites on host cells
-Phages attach by tail fibers
How does the Baltimore Classification System classify viruses? (5)
-Genome structure
-Shape
-Mechanisms of replication
-Envelope presence/absence
-Disease/symptoms it causes
What are the routes of viral transmission?
-Enteric (polio, rotovirus)
-Respiratory (influenza, measles, rhinovirus)
-Zoonotic (rabies, west nile virus)
-Arboviruses (anthropods)
-Sexually (HSV, HIV, hepatitis)
Where does bacteriophage replication happen in cell?
-Cytoplasm of bacteria
Where does viral replication happen in eukaryotic cell?
-Nucleus (for most)
-Cytoplasm in large DNA viruses
How do viruses get into cells?
-Bind to one or more receptor cites on host cell
-Then, either endocytosis (non-enveloped) or fusion with host cell membrane (enveloped)
-Bacteriophages inject their DNA into cell
How do viruses get out of cells?
-Most enveloped leave via budding
-Most non-enveloped leave when host cell lyses
List the steps of viral replication
-Attachment/Adsorption
-Penetration
-term-31Uncoating/genome release
-Synthesis (DNA/proteins)
-Assembly/maturation
-Release
Difference b/w Virulent and Temperate phage
-Virulent- Causes lysis/death of cells
-Temperate- Becomes part of host chromosome/induces host to make new viruses
What are the steps of lytic bacteriophage replication?
-Phage binds to receptors
-Phage DNA is injected into cell
-Transcription (production of viral encoded DNA)
-Replication of phage DNA
-Transcription (translation of capsid/lysis proteins)
-Cell lyses/Phage is released
Define Prophage
Bacteriophage DNA becomes embedded in bacteria's DNA
Define Lysogen
A bacterium containing a prophage
Define lysogenic conversion
-When phenotype (properties) of a bacterial cell are changed due to carrying a phage
What are some properties encoded by prophages?
-Toxin secretion
-Membrane modification
-Virulence factors