1/87
Looks like no tags are added yet.
Name | Mastery | Learn | Test | Matching | Spaced | Call with Kai |
|---|
No study sessions yet.
Obligate Aerobes
only aerobic growth, oxygen required. Contains enzymes catalase and SOD(superoxide dismutase) which neutralizes toxic forms of oxygen. Growth only where high concentrations of oxygen have diffused into the medium
How are endospores useful to a bacterial cell? Outline the endospore formation process
Resting cells found in certain bacterial species.
Resistant to desiccation, heat and chemicals
Can be viable for centuries
Sporulation: process of endospore formulation. NOT REPRODUCTION
1.) Spore septum begins to isolate newly replicated DNA and a small portion of cytoplasm
2.) Plasma Membrane starts to surround DNA, cytoplasm and membrane isolated in step 1
3.) Spore septum surrounds isolated portion, forming forespore
4.) Peptidoglycan layer forms between membranes
5.) Spore coat forms
6.) Endospore is freed from cell
Characteristics of Microorganisms
1.) Microbes as a group show diversity, multiple domains
2.) Microbes are Ubiquitous! They're everywhere
3.) Structure=Function
Are all microbes dangerous?
NO ONLY 1% OF ALL MICROBES ARE DANGEROUS TO HUMANS
What is the importance of Microbial Life on earth?
1.) Major part of food chain of all organisms
2.) Waste breakdown/nitrogen cycling in plants
3.) Food Production
4.) Drug Production
Beneficial Uses of Microbes
1.) Microbial Ecology
2.) Bioremediation
3.) Pest Control
4.) Biotechnology
Who developed the system of naming organisms and whats it called?
Carl Linnaeus, Binomial Nomenclature
What are the three domains of life and who developed it?
Bacteria, Archaea, Eukarya. Developed by Dr. Carl Woes
What characteristics are used to classify life into three domains?
Ribosomal RNA, Single Cell/multicellular, Transferral RNA Structure
Prokaryote Bacteria
1.) Single-Celled Organisms
2.) Bacteria exist in different shape, have cell wall made of Peptidoglycan
3.) Asexual Reproduction, Binary Fission
4.) Modal or Non-Modal, Flagella allows it to move
Prokaryote Archaea
1.) Present in most extreme environments
2.) Methanogens, high methane environment
3.) Extreme Halophiles, high salt environment
4.) No Peptidoglycan, different cell wall
Fungi
1.) Multicellular or Unicellular
2.) Most engage in sexual reproduction, some in asexual reproduction and some can do both
3.) Mycellea made up of filaments called Hyphae
4.) Cell wall made of Kiatin
5.) Absorb organic chemicals for nutrients
Protozoa
1.) Unicellular
2.) Free living or parasitic
3.) Some are Photosynthetic
4.) sexual or asexual reproduction
5.) May be Modal, can use flagella, massive Cillia or a pseudopod "false foot" to move in environment
6.) Disease causing agents
Algae
1.) Water Plants
2.) Cellulose Cell walls
3.) Uni or multicellular forms
Helminths
1.) Parasitic flatworm/roundworm
2.) Microscopic
3.) Cysts/egg/larvae are way from going host to host
Viruses
1.) Extremely small, Acellular. Neither Prokaryote or Eukaryote
2.) Can be seen with Electron Microscope
3.) Consist of nucleic acid core either DNA or RNA
4.) Nucleic acid surrounded by protein coat, sometimes by lipids as well
5.) Parasites, only replicate in a host cell
Anton Van Leuwenhoek (1673) (Early Year Major Event)
(Animalcules) Created first Microscope to look at animal cells
Robert Hooke(Early Year Major Event)
coined the term "cell" and redesigned microscope with light source
Edward Jenner(Early Year Major Event)
(vaccination) First to start idea of vaccines with cowpox. Exposed maids to cowpox before working with them
Louis Pasteur(Early Year Major Event)
Refutes Spontaneous Generation with beef broth experiment
Spontaneous Generation Theory
the theory that living organisms can rise from nonliving things
Rudolf Virchow(Golden Age of Microbio)
Theory of biogenesis- If there are cells, they will settle and continue to multiply
Robert Koch(Golden Age of Microbio)
Postulates of Disease/Germ theory of disease- Postulates determine how germs can cause disease
Ignaz Semmelweis (Golden Age of Microbio)
advocated hand washing to prevent transmission of puerperal fever from one OB patient to another. First started idea of Aseptic Technique
Joseph Lister
Began using disinfectants and antiseptics during surgery. Continued Semmelweis' idea of aseptic technique
Chemotherapy
Using chemical drugs to defeat disease (NOT CANCER CHEMO)
Paul Erlich and Chemotherapy
coined the term antibiotics for the "magic bullet" antimicrobials he pursued
Alexander Fleming
discovered penicillin, Penicillum inhibits growth of colonies
What are the 5 branches of Microbiology?
1.) Bacteriology- Study of Bacteria
2.) Mycology-Study of Fungi
3.) Parasitology-Study of Parasites
4.) Immunology- Study of immune system
5.) Virology- Study of Viruses
Biofilm
A surface-coating colony of one or more species of prokaryotes that engage in metabolic cooperation.
normal human microbiota
Populations of mutualistic and commensal microbes that live on and in the bodies of healthy individuals, about 100 trillion bacteria in total, representing hundreds of species
emerging infectious diseases
A new disease or one that reemerges, coronavirus
Primary Differences between Prokaryote and Eukaryote cells
1.) Prokaryotes are smallest organisms/unicellular with circular DNA in nucleoid region, Eukaryotes are larger and multicellular, have enclosed nucleus with strands of DNA
2.) Prokaryotes have cell wall for structure/protection, Eukaryotes have cytoskeleton for support
3.) Prokaryotes do Asexual Reproduction(Binary Fission), Eukaryotes do Sexual Reproduction
Baccillus Cell Shape(Rods)
SingleBaccillus- Single rod
Diplobaccillus- Two rods
Streptobaccillus- Chain of rods
Coccobaccillus-rounded rod, square shape
Coccus Cell Shape (Round/spherical)
Diplococci- Two cocci, one plane of division
Streptococci-Chain of cocci, one plane of division
Tetrad- Four cocci in a quad, two planes of division
Sarcinae- Two tetrads stacked
Staphylococci- Clump of Cocci, looks like grapes
Spiral Cell Shape
Vibrio- Comma shaped, flagella present
Spirillum- Corkscrew Shape
Spirochete- Spiral shaped, wormlike, longer than spirrilum, corkscrew movement
Describe structure and function of Glycocalyx(outer layer of bacteria)
Two types Capsule and Slime Layer
1.) Capsule is sticky, made of "sugar coat", protects the bacteria from dehydration/loss of nutrients. Ability to attach to host cell, AND WILL STOP PHAGOCYTOSIS
2.) Slime Layer is loose/unorganized. Can attach to host or other bacteria and protects it from dehydration.
Prokaryotic Flagella parts, structure and function
1.) Made of three parts: Filament(Actual Tail), Hook(Attaches filament to Basal Body and plasma membrane) and Basal Body(Motor)
2.) Rotates 360 degrees to allow bacteria to "run" and "tumble"
3.) Bacteria move in response to Stimuli (Taxis)
How do Prokayotic and Eukaryotic Flagella movement differ?
Prokaryotic flagella rotate to allow them to run and tumble. Eukaryotic flagella are composed of microtubules in a 9 pairs + 2 array that allow it to bend and grappling hook twitching motility
peritrichous flagella(arrangement of flagella)
flagella all over
Monotrichous Flagella(arrangement of flagella)
One flagella on polar end
Lophotrichous Flagella (arrangement of flagella)
Tuft(several) flagella on polar end
Amphitrichous Flagella (arrangement of flagella)
One Flagella on both polar ends (2 Total)
axial filaments (endoflagella)
Found ONLY in spirochetes.
Anchored at one end of the cell
Rotation of Axial Filament rotates the cell in the opposite direction (similar to corkscrew)
Differentiate the functions of Pili and Fimbriae. Describe how Pili are used for motility
Fimbriae allow for attachment.
Pili facilitate transfer of DNA from one cell to another during conjugation. Have both gliding and twitching motility
Twitching motility of Pili act like a grappling hook, moves in jerking motion towards Pillus
Describe function of bacterial cell wall
Made of Peptidoglycan, sugar protein cell wall
Combats lysis, osmotic lysis
Provides strength to resist rupturing due to osmotic pressure
good antibiotic target
List the Components of Peptidoglycan and describe how these components interact. (GRAM POSITIVE CELL WALL)
Repeating framework of long glycan(sugar)chains cross linked by peptide/protein fragments.
NAG and NAM form sugar chains while amino acids held together by peptide bonds serve as bridge/cross chain.
Wall Techoic Acid links and holds cell wall components together
Lipotechoic Acid- Anchors components of cell wall to plasma membrane, negative charge.
Structurally how does a gram positive cell wall and gram negative cell wall differ?
A gram negative cell wall contains no Teichoic acid.
Composed of thin layer of Peptidoglycan and outer membrane
Lipopolysaccharide on outer membrane has three parts, O Polysaccharide, Core Polysaccharide(provides structure stability), and Lipid A (endotoxin)
Explain the gram stain procedure
Developed by Hans Christian Gram
1.) Primary stain of crystal violet
2.) Use mordant of Iodine to allow for primary stain to stick. Intesifies the affinity of a stain to a structure
3.) Decolorizing agent of Alcohol-Acetone, determines whether gram pos or neg. Dehydrates the cell and pores in cell wall will seal. Will seal the mordant and primary stain. Gram pos cells stay purple while gram neg cells turn colorless.
4.) Counterstain of Safranin. Will turn the gram neg bacteria from colorless to red. However gram pos cells will stay purple even with counterstain.
What happens to cell walls when they become damaged? What are some examples of cells that can disrupt or breakdown cell walls
We hope to kill the cell when damaging the cell wall but some cells have the ability to survive without it.
Protoplasts are wall-less gram positve cells
Spheroplasts are wall-less gram negative cells
L Forms are wall-less cells that swell into irregular shapes
Lysozome digests disaccharide in peptidoglycan
Penicillins are cell wall inhibitors by interfering with peptide bonds
Describe the Structure of the Plasma Membrane and its components
Plasma membrane contains a phospholipid bilayer, peripheral proteins, and Integral and Transmembrane proteins penetrate the membrane
selectively permeability and what are some processes that move materials across the plasma membrane
a property of cell membranes that allows some substances to pass through, while others cannot
Simple diffusion through the lipid bilayer
Facilitated diffusion through a nonspecific transporter
Facilitated diffusion through a specific transporter
Osmosis through the lipid bilayer and an aquaporin
Osmosis and the effect of hypertonic, hypotonic and isotonic solutions on a bacterial cell
Osmosis is the movement of water particles through a semipermeable membrane going from a high to low concentration until equilibrium is reached on both sides.
If a cell is placed in a hypotonic solution, water moves into the cell and if the cell wall is not strong enough it will burst (osmotic lysis)
If a cell is placed in a hypertonic solution, water moves out of the cell and its cytoplasm begins to shrink (plasmolysis)
If a cell is placed in an isotonic solution no net movement of water occurs
Describe the structure of bacterial ribosomes. Why are bacterial ribosomes good targets for antibiotics?
Prokayotes: 70s (svedburg unit)
50s+30s subunits, 30s is the small subunit and 50s is the large subunit. Together they make the complete 70s ribosome
unbound in bacterial cells
Eukaryotes: 80s
40s+60s subunits. 40s is the small subunit and 60s is the large subunit. Together they make the complete 80s subunit
Membrane bound: Attached to ER and free in cytoplasm
Ribosomes are targets for antibiotics because of the size difference in Prokaryotes (70s). Antibiotics can target specific ribosomes to stop them from creating proteins.
Microbial Growth
an increase in number of cells/population, not in cell size
Effects of temperature, pH, osmotic pressure and oxygen on microbial growth
Temperature is the range of temperatures ideal for microbial growth
pH has a varied range based on microbe type. Most 6.5-7.5 pH, acidity and alkalinity inhibit growth.
osmotic pressure, cell in a hypertonic solution is plasmolysed and inhibit growth. Prefer isotonic solutions.
Oxygen byproducts can have a toxic effect on bacteria if they don't have the means of expelling it
facultative anaerobes
both aerobic and anaerobic growth; greater growth in presence of oxygen. Presence of both catalase and SOD to dispel toxic oxygen. Growth is best where most oxygen is present but can occur throughout the test tube.
obligate anaerobes
carry out fermentation or anaerobic respiration and cannot survive in the presence of oxygen. Lacks both enzymes that can dispel toxic oxygen.
aerotolerant anaerobes
can tolerate oxygen and grow in its presence even though they cannot use it, anaerobic growth only. Only has SOD to dispel toxic oxygen.
Microaerophiles
Aerobes that require Oxygen levels from 2-10% and have a limited ability to detoxify Hydrogen Peroxide and Superoxide Radicals
quorum sensing
Communicate and cooperate in the formation and function of biofilms. Quorum sensing allows the microbes in a biofilm to communicate with each other even though they may not be in the same species for the survival of the biofilm.
chemically defined media
exact chemical composition is known
complex media
extracts and digests of yeasts, meat, or plants. Undetermined chemical composition, exact chemical compositon varies from batch to batch.
Describe Methods to grow microbes aneorbically and under high CO2 conditions
Reducing Media: Chemically combines with dissolved O2 and depletes O2 in the media
Anaerobic jar/anaerobic chamber
CO2 incubator/candle jar
Biosafety levels
BSL-1: no special precautions
BSL-2: lab coat, gloves, eye protection
BSL-3: biosafety cabinets to prevent airborne transmission
BSL-4: sealed, negative pressure
Exhaust air is filtered twice
Biosafety levels act as a guide on how dangerous certain microbes are
selective media
suppress growth of unwanted bacteria and encourage growth of desired microbes
differential media
allows growth of several types of microbes and displays visible differences among those microbes
enrichment culture
Selects and encourages growth of desired microbes.
Increases very small numbers of organisms to detectable levels
Streak Plate Method
Used to isolate pure cultures. 4 streaks done on a single plate, streak 1 touches streak 2, streak 2 touches streak 3, streak 3 touches streak 4 but streak 4 does not touch streak 1. Amount of colonies goes down with each streak. You want to form colony forming units (CFUs)
What are the three ways microbes are preserved?
1.) Refrigeration (short term)
2.) Deep Freezing:-50 degrees C to-95 degrees C
3.) Lyphophilization (Freeze Drying): Frozen (-94 degrees C to -72 degrees C) and dehydrated in a vaccum.
List and Define Methods of Reproduction in prokaryotic cells
Binary Fission: Asexual reproduction
Budding: Yeast cells
Condiospores(actinomycetes)
Fragmentation of Filaments
generation time
the time it takes for a population to double in number
What are the 4 phases of the bacterial growth curve
1.) Lag Phase: Intense activity preparing for growth but no increase in population size
2.) Log Phase: Logarithmic or exponential increase in population, highest metabolic activity.
3.) Stationary Phase: Period of equilibrium, microbial deaths balance new production of cells
4.) Death Phase: Population is decreasing at a logarithmic scale
Whats the difference between direct and indirect measures of microbial growth
Direct methods give an almost exact number Microbial growth by processes like plate counts or filtration.
Indirect methods give you an approximate amount of microbial growth by processes like turbidity, metabolic activity and dry weight.
Sepsis
The presence of significant contamination of microbes
Asepsis
absence of significant contamination of microbes
Sterilization
The process that completely destroys all microbial life, including spores.
Disinfection
Destruction of vegetative pathogens on inanimate objects
Antisepsis
destruction of vegetative pathogens on living tissue
Degerming
removal of microbes from a limited area
sanitation
intended to lower microbial growth on eating/drinking utensils to safe public health levels.
biocide/germicide
treatments that kill microbes
Bacteriostasis
inhibiting, not killing, microbes
What factors influence the effectiveness of antimicrobial treatments? What cellular structures are targeted by the microbial control agents?
Microbial Characteristics/ Types
Environmental influence/temperature
Presence of Organic matter
Nature of suspending medium
Time of exposure
Targets include: Alteration of membrane permeability, damage to proteins, damage to nucleic acids.
What is the decimal reduction time?
Minutes to kill 90% of a population at a given temperature
How is moist heat sterilization performed and why is it more effective than dry heat sterilization
Boiling and producing steam under pressure using an autoclave are ways to perform moist heat sterilization.
Moist Heat is more effective because heat is more easily transferred than dry heat
What is pasteurization and the method of Pasteurization. How are dairy products tested to ensure proper pasteurization?
Pasteurization eliminates pathogens and reduces spoilage organisms which increases quality. For milk, process of pasteurization includes High Temp Short Time(HTST): 72 degrees C for 15 sec and Ultra High Temperature (UHT): 140 degrees C for less than 4 seconds.
Phosphotaste Test is used to see if enzyme is inactivated in dairy pasteurized.
examples of dry heat sterilization,
flaming, incineration, hot-air sterilization. Kills by oxidation
have to use a higher temperature for longer if using a dry heat sterilization technique compared to a moist heat sterilization technique.