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discuss T cell trafficking and surveillance
travel through the blood and lymph nodes and back into the blood and looks for antigens
pathogens will stay in lymph nodes until T cells encounter them
discuss the differences between naive and effector T cells
naive
in the blood and lymph nodes and haven’t encountered an antigen yet. originated in the thymus after positive and negative selection
effector
at the site of infection
proliferate, make cytokines and cytoxicity
why does proliferation occur and when does it happens?
after a naive T cells encounters an antigen, it proliferates as only a few T cells recognise a specifc antigen
proliferation generates clone to make a good immune response to eliminate it
types of APCs
dendritic cells- professional antigen presentation- in the lymph nodes and spleen
macrophages- interact with effector T cells usually- In the lymph nodes and tissues- less effective
B cells
why are DCs the most effective APC?
highly phagocytic
larg surface area- have spikes to increase chance of antigen encounter
tissue residency- samples early
migration- can transport them to the lymph nodes
what are the jobs of a dendritic cell?
sample and phagocytose- immature DCs are very phagocytic but poor at APC
once encounters pathogen- triggers TF and translation changes. DC stops and switches from phagocytosis mode to migrate mode, chemokine receptors CCR7:CXCL7 are up regulation to allow migration
migrate to the lymph node by chemokine receptors and waits for naive T cell to present to
up regulates MHC molecules and costimualtory molecules like cd80/86 to become fully mature
what are the 3 signals naive T cells need for activation?
APC via MHC
costimuatlion- need CD28 binding to B7 to act as confirmation and shows what type of pathogen it is
cytokine environment- determines T cell differentiation
immune responses tailored by pathogen type
viruses- inside host cytoplasm. viruses are intracellular and are hidden from antibodies. requires cytotoxic T lymphocytes
mycobacteria like TB- replicate within macrophages. intracellular but in vesicles and need activated macrophages and Th1 response
extracellular bacteria- antibodies are soluble and reach them, and complement can neutralise them
what are bacteria vs viruses presented on?
viruses- MHC I- CD8
bacteria-MHC II-CD4
structure of MHC II molecules
2 chains-
alpha 1 and alpha 2- anchored in the membrane and short cytoplasmic chain- doesn’t signal
beta chain- beta 1 and beta 2- anchored in the membraned
have peptide binding groove- where peptides bind
2 alpha helices and makes a wall and has beta pleated sheets
discuss MHC II and how it works- EXOGENOUS
sampling by APC into endosomes
MHC II is made in the ER and the invariant chain(not alpha or beta, stops it from binding self) guides MHC II to the ER where the bacterial peptides are
endosome fuses with MHC II vesicle and breaks down bacteria not small peptide fragments and removes most of the invariant chain leaving CLIP
HLA-DM removes CLIP and allows peptides from bacteria to bind
peptide-MHC II complex moves to the cell surface and presents it