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phylogeny
the evolutionary history of a species or group of related species
systematics
classifies organisms and determines their evolutionary relationships
taxonomy
the ordered division and naming of organisms
phylogenetic tree
diagram showing evolutionary relationships of organisms with a common ancestor; resembles a tree
outgroup
a group that one does not belong to or identify with; acts a comparison group
homologies
phenotypic and genetic similarities due to shared ancestry
analogy
similarties dye to convergent evolution
convergent evolution
occurs when similar environmental pressures and natural selection and produce similar adaptations in organisms from different evolutonary lineages
homoplasies
analogous structures that evolved independently
molecular systematics
uses DNA and other molecular data to determine evolutionary relationships
cladistics
groups organisms by common descent
clade
a group of species that includes an ancestral species and all its descendants
mononphyletic
includes a common ancestor and all of its descendants
paraphyletic
consists of an ancestral species and some, but not all, of its descendants
polyphyletic
consists of various species with different ancestors
shared ancestral character
a character that originated in an ancestor of the taxon
plesiomorphy
an ancestral character
shared derived character
an evolutionary novelty unique to a particular clade
synapomorphy
shared derived character
maximum parsimony
applying the simplest, most obvious way with the least number of steps
maximum likelihood
given certain rules about how DNA changes over time, a tree can be found that reflects the most likely sequence of evolutionary events
phylogenetic bracketing
allows us to predict features of an ancestor from features of its descendants
rRNA
DNA that codes for rRNA changes slowly and is useful for investigating branching points
mtDNA
evolves rapidly and can be used to explore recent evolutionary events
gene duplication
increases the number of genes in the genome, providing more opportunities
orthologous genes
found in a single copy in the genome and are homologous between species (diverge after speciation occurs)
paralogous genes
result from gene duplication, so are found in more than one copy in the genome
molecular clock
model that uses comparisons of DNA sequences to estimate phylogeny and rate of evolutionary change
early species classification
plants or animals
five kingdoms
monera, protistam plantae, fungi, animalia
3-domain system
bacteria, archaea, eukarya
tree of life
based largely on rRNA; suggests that eukaryotes and archaea are more closely related than to bacteria
horizontal gene transfer
movement of genes from one genome to another