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What are some ways bacteria are useful in the environment?
-Nitrogen fixation (converts Nitrogen to Ammonia)
-Carbon fixation (Converts CO2 into usable carbon)
-Degradation of toxic compounds
Characteristics of Rhizobium
-Nitrogen-fixing
- Live in roots of legume plants
- Produce ammonia (use by plants)
In what type of symbiotic relationship do both organisms benefit?
Mutualism
In what type of symbiotic relationship is one organism harmed and the other is unaffected?
Amensalism
In what type of symbiotic relationship does one organism benefit and the other is unaffected?
Commensalism
In what type of symbiotic relationship are both organisms unaffected?
Neutralism
In what type of symbiotic relationship does one organism benefit while the other is harmed?
Parasitism
What is hemolysis?
Destruction of red blood cells (Alpha-partial, Beta-total, Gamma-None)
Characteristics of Mycobacterium tuberculosis
-Mycolic acid coat (waxy)
-Difficult to treat w/ antibiotics
-Slow growth
-Sx: cough(sputum/blood clumps), fever, crackling in lungs,
Characteristics of Mycobacterium leprae
-Causes leprosy (Hansen's disease)
-Found in peripheral body regions (cooler areas)
List some qualities of the human microbiome
-All microbes associated to the human body
-Ratio ~10:1
-Bacteria thrive in damp/moist areas (mouth, nose, throat, ears, vagina, GI)
-Some bacteria thrive on dry places as well
-Can be resident or transient microbes
Why is maintenance of the human microbiome so important?
-Important roles in digestion(GI tract), immune function, and overall homeostasis
How are blood agar plates used?
-TSA agar with 15% sheep blood added, looking for "clear zone" where RBCs were lysed
-Common in clinical settings
-Streptococcus (pneumoniae/pyogenes) and Staphylococcus (aureus) are common examples
Characteristics of Corynebacterium
-Gram positive
-Pairs of rods (v-shaped)
-Facultative anaerobes
-Found in skin and mucous membranes
-Harmless unless toxin-producing
Characteristics of Corynebacterium dihptheriae
- Causes diptheria (respiratory tract)
- Produces hramful toxin
Characteristics of Clostridium
-Obligate anaerobes
-Gram-positive rods
-Endospore formers
-Produce toxins
Characteristics of Clostridium botulinum
- Causes food poisoning
- Produces botulinum toxin
- Endospores found in soil
- Can't give honey to infants bc of underdeveloped immune system (potential colonization in GI tract after spore ingestion)
Characteristics of Clostridium perfringens
-Causes myonecrosis (gas gangrene) and food poisoning
_Obligate anaerobe
-Wound infections (aerobic environment) can be treated w/ hyperbaric chamber
Characteristics of Clostridium tetani
-Causes tetanus
-Produces toxin (tetanosasmin)
-Found in soil, and deep wounds
Characteristics of Clostridium difficile
-Severe colitis (some severe cases are deadly)
-Common hospital acquired infection ("C-diff")
Characteristics of Streptococcus
-Obligate fermenters (produce lactic acid)
- Grow in chains/pairs
-Gram positive
- Can cause RBCs to lyse
- Some are pathogenic
Characteristics of Streptococcus pyogenes
-All pathogenic (on a "range" of severity)
-Beta-hemolytic group A streptococci
- Can be in some human normal flora of respiratory tract (<15%)
- Common cause of strep throat (bacterial pharyngitis)
- Some skin infections (impetigo)
- Rare: necrotizing faciitis
Characteristics of Streptococcus pneumoniae
-Gram positive cocci in pairs
-Causes bacterial pneumonia, menengitis, and endocarditis (mostly immunocompromised pop.)
-Virulent strands have capsule
Characteristics of Lactobacillus
-Gram positive rods
-Most are aerotolerant anaerobes (not killed by O2)
-Fermentative (produces lactic acid)
-Part of normal microbiota and vagina (helps maintain acidic environment)
-Antibiotics can disrupt growth, causing secondary infection (yeast infection)
Characteristics of Bacillus
-Gram positive rods
-Forms endospores
-Obligate aerobes/facultative anaerobes
-Source of antibiotics (found in soil)
-Opportunistic pathogen (food poisoning, anthrax, etc.)
Characteristics of Bacillus cereus
-Common in soil
-Found in milk
-Can cause food poisoning
Characteristics of Bacillus anthracis
-Causes anthrax
-Uncommon in environment, hard to isolate
-Affects animals
-In humans: black ulcers, severe enterocolitis, and bran damage from swelling
-Fatal when untreated
Characteristics of Staphylococcus aureus
-Cocci in clusters, not chains
-Causes: skin infections that produce boils, carbuncles, cellulitis, or impetigo
-Some produce enterotoxin (enteritis, staph food poisoning, toxic shock syndrome)
-Many antibiotic resistant strains (MRSA, VRSA) which are contagious and extremely difficult to treat
-Threat in hospitals, nursing homes, etc.
Characteristics of Staphylococcus epidermis
-Main habitat is human skin; nonpathogenic for normal pop.
-Important cause of infections associated w/ IV caths
-Problematic in hospital settings (lots of immunocompromised pts)
Characteristics of Pseudomonas
-Unique gram negative bacteria (produces pigments)
-Aerobic
-Does NOT ferment
-Found widespread in soil/water
-Can grow practically ANYWHERE in the body, cause of many infections (opportunistic pathogen)
-Biofilm can cause chronic, difficult to eradicate infections
Characteristics of Vibrio
-Gram negative rods, often curved (commas)
-Found mostly in aquatic environments (more alkaline), some food
Characteristics of Vibrio cholerae
-O1 or O139 can produce toxin responsible for cholera (widespread epidemics)
-Transmission: ingestion of contaminated water (or food, mostly seafood)
-Hypersecretion of electrolytes/water in colon, profuse watery diarrhea and dehydtration
-Uncommon in US
Characteristics of Legionella pneumophila
-Aquatic environment (warm water)
-Often reside in protozoa
-Causes respiratory disease (only transmits from environment to human, not human to human)
_Ex: contaminated air conditioning units
-Hard to culture; needs "charcoal" media
Characteristics of Escherichia coli
-Most strains are mutualistic w/ humans (E. coli in gut)
-Used as indicator for fecal contamination
-Can produce potent shiga toxin which inhibits protein synthesis and causes hemorrhagic colitis, inflammation of GI tract, and bloody diarrhea
-Hemolytic uremic syndrome (HUS) in severe cases
-O157 and H7 can infect ground beef/produce
Characteristics of Salmonella
-Many species
-Identify using antisera
-Cause of typhoid fever
Describe protists
-algae and protozoa
-highly diverse in organism and environment
Fungal cell walls characteristically contain:
Chitin
Fungal cell membranes characteristically contain:
Ergosterol
What are the most common growth characteristics of fungi?
-Moist environment
-Slightly acidic
-Can grow with/without light
-Vary in O2 requirement
How many major groups of fungi are there?
7
What fungi groups contain pathogens? (4
-Zygomycota
-Ascomycota
-Basidiomycota
Microsporidia
How are fungi commonly grouped?
Based on their reproductive strategies
Do fungi photosynthesize or have chlorophyll?
No and No
How do fungi obtain food?
Heterotrophs- obtain carbon through complex organic compounds
What type of fungi is used known as baker's yeast?
Saccharomyces cerevisiae
Penicillin is isolated from:
Penicillium mold
What are mycoses?
Illness caused by fungi
Multicellular fungi are usually called:
Molds
Molds are made of filaments called:
Hyphae
What are septate hyphae?
Hyphae with cell walls
What are coenocytic hyphae?
Hyphae with no cell walls b/w cells
What are tangled networks of hyphae?
Mycelium
Unicellular fungi are commonly known as:
Yeasts
How do yeasts reproduce?
Budding (asexual)
What is a dimorphic fungi?
Can appear as yeast or mold, often changing to adapt to environment
Characteristics of Aspergillus
-Produces aflatoxins
-Contaminant of nuts/grains
Characteristics of Dermatophytes
-Genera that causes athlete's foot, jock itch, ringworm
Characteristics of Histoplasma capsulatum
-Respiratory pathogen
-Associated with birds and bats
Characteristics of Coccidioides immitis
-Valley fever
Characteristics of Candida albicans
-Common cause of yeast infection (vagina and other moist body sites)
Characteristics of Cryptococcus neoformans
-Causes serious lung infections (especially in immunocompromised pts)
-Basidocarp (forms spores through budding in fruiting bodies)
Characteristics of Microsporidia
-Unicellular fungi
-Obligate intracellular parasites
-Entry via a polar tube
Common fungi used as foods:
-Edible mushrooms
-Morels
-Truffles
Characteristics of Naigleria fowleri
-"Brain eating" amoeba
Characteristics of Acanthamoeba
-Causes amoebic keratitis (eye infection)
Characteristics of Entamoeba histolytica
-Parasitic amoeba, causes amebic dysentery
Characteristics ofPlasmodium
-Causes Malaria (Amoebazoa)
-Complex lifecycle involving mosquito
Characteristics ofToxoplasma gondii
-Causes toxoplasmosis
-Amoebazoa transmitted via cat feces or undercooked meat
Characteristics of Giardia
-Parasitic protozoa (forms resting stage/cyst)
-GI infections/diarrhea
-Transmitted through feces/contaminated water
Basic features of fungi
-Lack chlorophyll
-Do not photosynthesize
-Heterotrophic