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Define Homeostasis?
The internal conditions of a living organism remain stable regardless of what is going on in the external environment
At the Biochemical Level, where is energy stored?
In the chemical bonds
What are two ways that Organisms Grow
1. Increase in cell number
2. Increase in cell size ( as in muscle)
What is the First law of thermodynamics?
Energy is neither created nor destroyed in the universe, but it can be converted from one form to another
What is the Second law of Thermodynamics?
Entropy ( measure of randomness). All energy will eventually degrade into heat . Organization of matter will become randomized
What is Entropy?
Measure of randomness; The disorder in a system
Metabolism
sum total of all reactions in a system
Anabolism
Endergonic reaction, Requires energy and will not occur spontaneously
Catabolism
Exergonic Reaction, will release energy and will occur spontaneously, you will have less order
What is the energy of Activation?
minimum energy required to start a chemical reaction
What are two ways an enzyme modifies a chemical reaction?
1. It speeds the reaction
2. It lowers the energy of activation
What happens when a molecule is phosphorylated?
A phosphate has been attached to the molecule, increasing free energy and making the molecule more complex, as well as changing the molecules shape
What is the Primary mechanism of phosphorylation ?
Control inside of the cell, it can activate or turn off an enzyme.
What is hydrophillic?
Molecules that mix well with water, They are also polar
What is Hydrophobic?
Molecules that don't mix well with water, they are nonpolar
Polar?
molecules that need protein transports to get through the cell's membrane
Non-polar?
Molecules that don't need assistance getting through the cell membrane, unless the molecules is huge.
What is a Carbohydrate?
The food we take in, Glucose (6 carbons)
Monosaccharides?
Simple sugar, Glucose, Frutose and Galactose
Disaccharides?
two monosaccharides ----Sucrose, Malatose, Lactose
Polysaccharides?
Long chains of Monosaccharides
Storage polysaccharide of animals?
Glycogen
Storage polysaccharide of plants?
Starch
Polysaccharide for plant walls?
Cellulose( most abundant)
What is protein?
A large biological molecule or macromolecule, consisting of one or more long amino acid chains
What is an amino Acid
a simple organic compound containing both a carboxyl (—COOH) and an amino (—NH2) group.
What is the Primary structure of an amino Acid?
linear sequence of amino acids in a polypeptide chain, held together by covalent bonds called peptide bonds.
Why is the 3D dimensional structure of a protein important?
if the shape is changed, then the fucntion will change as well. If the shape is completely changed then the protein can result in denatured.
What is a lipid-- What are the parts?
Lipid is a nonpolar molecule. Glycerol backbone (3 carbons) + 3 fatty acid chains (even # of C)
What is a saturated Lipid?
it has a single bond
What is an unsaturated lipid?
it has a double bond-- will change the structure and properties of the lipid
What property Of lipids makes them very different than proteins and carbohydrates?
They are v nonpolar molecules
What is a Phospholipid
has a head that is hydrophillic and two tails that are hydrophobic
how is a phospholipid made?
A phosphate group + Glycerol + 2 fatty acid chains
How do Phospholipids aggregate to form the backbone of a membrane?
The hydrophilic head contains the negatively charged phosphate group, and glycerol. The hydrophobic tail usually consists of 2 long fatty acid hydrocarbon chains.
Who is this organization of phospholipids selectively permeable?
???
Define Diffusion
Movement of a material from an area of high concentration to an area of low concentration
What two criteria must be met for diffusion ot occur across a biological membrane?
1. Concentration gradient
2.Permeability
Define Osmosis
movement of water from an area of low concentration of dissolving molecules to an area of high concentration of dissolved molecules
What is Isotonic?
If a solution has an equal amount of particles
What is Hypertonic?
If a solution has a greater amount of dissolved particles relative to another compartments-- Cell will shrivel
What is Hypotonic?
IF a solution has a fewer amount of dissolved particles relative to another compartment --- Cell will swell
What are two kinds of carrier mediated transport?
Facilitated diffusion and Active Transport
What are the properties of Facilitated diffusion
1. Specificity (Selective permeability)
2. Saturated kinetics
HOw facilitated diffusion works?
Carrier proteins can move molecules across the membrane.
What three things happens to glucose once it enters a cell?
1. broken down to use for energy
2. stored (glycogen )
3. Incorporated into large molecules
What is active transport?
Carrier-mediated transport, that goes against the concentration gradient and requires energy
Active transports properties?
1. Concentration gradient
2.Saturation Kinetics
What are three types of Bulk transport?
1. Endocytosis
2.Exocytosis
3.Picocytosis
What is endocytosis?
takes up a large molecule or large amounts of a molecule all at once, that are outside of the cell
What is Exocytosis?
Releases a large amount of molecules out of the cell all at once
What is pincocytosis
process used to take up water?
What is an enzyme?
are proteins
What is its active site?
part of the enzyme that is going to interact with the substrate. Will contain specific amino acids
Enzyme Specificity?
enzymes for specific substrate is very crucial
What are Saturation Kinetics?
Indicator that some component is limiting a reaction
which there is enough enzymes to constantly have a substrate bound them and therefore the reaction is occurring at Vmax.
What kind of experiment is Run to demonstrate saturation kinetics?
???
What is allosteric modulation?
change in activity in an enzyme due to the interaction by a modulator at a site other than the active site
Competitive inhibitor
Competes with the substrate to take up the active site, which will decrease the rate of the reactions
Non-competition inhibitor
Will not compete with the subsrate for the active site, instead will combine on the enzymes alternative site to change the active site, and inhibiting the subrate to fit
What are the Key characteristics of Prokaryotic cells
1. Cell wall
2. No membrane bound nucleus
3.Pili - surface projection
4. Ribosomes
5. Flagellum
6. Plasma membrane
7. Cytoplasm
What are the KEy Characterisitcs of Eukaryotic Cells?
1. Plasma membrane
2. Membrane bound nucleus
4. Nuceolus -- makes the ribosomes
5. Cytoplasm- compartmentalized by membrane bound organelles
What are three primary elements of the Cytoskeleton?
1.Microtubules
2. Intermediate Filaments
3. Actin Filaments or Microfilaments
What is Microtubules?
long hallow tubes made out of alpha and beta tubulins
1. Help maintain cell shape and help move material from through cell
What is Intermediate Filament
Tension- bearing filaments
1.maintaining shape of cell
What is actin Filament or Microfilament?
Can work with other filaments in the cell to induce shape changes in the cell
1. mostly they add to maintenance of shape and strength of cells
What is a motor protein?
Motor proteins are a class of molecular motors that are able to move along the surface of a suitable substrate. They are powered by the hydrolysis of ATP and convert chemical energy into mechanical work.
What are the three motor proteins?
1. Myosin
2. Kinesin
3.Dynein
What is Myosin used for?
Muscle contraction
what is Kinesin used for?
Molecule that carries cargo from one part of the cell to another along microtubules or various filaments ( the pengiun looking one)
What is Dynein used for?
Firmly attached to microtubles--- allows the microtubules to move past one another
1. Cilium can bend
2. Found in the cilium and flagellum
What is the internal structure of a Cilium or flagellum?
Axoneme-- a shaft of 9 + 2 microtublar arrangement
1. Doublets with two central microtubules
What is the structure of the nucleus?
Membrane bound nucleus with pores which is called nuclear envelope
what i the nucleolus ?
inside the nucleus,where two subunits of ribosomes are made
What is the structure of the Rough ER?
Studded with Ribosomes
Network of sacs and tubes
What are the functions of the ROugh ER?
1. primary function is the production and sorting of protein
What is the structure of the Smooth Er
LAcks ribsomes and network of sacs and tubes
What is the function of the Smooth ER?
1. Liver cells-- detoxifies toxins and converts them to forms that cen be excreted from our body
2. Accumulation of ions-- huge surface are
3. Carbohydrates metabolism-- involves the storage and release of glucose
4. Enzyme for synthesis of lipids-- and modification of lipids--- primary site where phospholipids are produced, hormones, cholesterol
What is a ribosome and what does it do?
Ribosomes are responsible for the synthesis of Protein
What is the structure of the Golgi apparatus?
Sacs that are stacked on top of each other.---large Surface area
What are the functions of Golgi?
Packaging center for movement of material
1. process proteins ( when protein arrive at the Golgi apparatus, it is not in its final form)
Describe the components of the secretory pathway?
Proteins produced in the Rough ER--> sent to Golgi Apparatus--> processed and packed into Vesicle --> vesicles move to plasma membrane ---> released by exocytosis
What is a lysosome and what does it do?
small membrane bound organelle, that contains hydrolases,that breaks down macromolecules
What is a perosixome and what does it do?
Contains a very specific enzyme (catalase) which will break down hydrogen peroxide into water and oxygen.
What is deamination?
is the process by which amino acids are broken down if there is an excess of protein intake. The amino group is removed from the amino acid and converted to ammonia. The rest of the amino acid is made up of mostly carbon and hydrogen, and is recycled or oxidized for energy.
What is the structure of Mitochondria and what does it do?
Structure:
Inner membrane-- has numerous folds and increases surface area
Outer membrane-- is smooth area-- structural protein
Matrix-- Inside the inner membrane, the jell like nature, high in enzymes
Function :
The primary sit of ATP production — ADP + P ( primary sit of phosphorylation)
What is the structure of a chloroplast and what does it do?
It has two membranes, an inner and outer membrane, used in photosynthesis . Found in all species of plant and algae-- stacks of membranes -- increase in surface area
What is a plastid?
Plant Organelles
What are chromoplasts?
Produce pigmentation, yelllow and brown pigments
Leucoplasts?
sythesize and store glycogen
What is Glycolysis ?
break down of glucose by enzymes, releasing energy and pyruvic acid
What is the Pre-kreb cycle?
Where the pyruvic acid needs to go through before it goes into the Kreb cycle-- goes through outer and inner membrane of the mitochondria
what is the Kreb Cycle?
Takes place in the Mitocondria matrix
its a series of chemical reactions used by all aerobic organisms to generate energy.
What is the Electron Transport?
takes place in the inner mitochondria membrane
is a series of compounds that transfer electrons from electron donors to electron acceptors via redox reactions, and couples this electron transfer with the transfer of protons (H+ ions) across a membrane.