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Cell Theory
Organelles: tiny, specialized structures performing specific cellular functions.
All organisms are composed of one or more cells.
Cells are the basic living unit of structure and function in organisms.
All cells come only from other cells.
Cell size (SA: V)
Plant and animal cells’ size range: 10µm - 100µm
SA: V (surface to volume) ratio: the reason for the small size of cells.
As the cell increases in volume, the proportionate amount of surface area decreases.
Surface area = the ability to get materials in and out of cells.
Nutrients enter, and wastes exit.
Volume = the needs of cells.
Large cells require more nutrients and produce more waste than small cells.
Small cells have a much greater SA: V than large cells → likely have adequate surface area for exchanging wastes for nutrients.
Large cells increase the SA: V by dividing into two cells, maintaining the same volume but increasing the surface area.

Eukaryotic cells
Have nuclei and membrane-bound organelles that contain genetic materials and control cellular activities.
Have a more complex structure than prokaryotic cells.

Outer Boundaries of Animal and Plant Cells
Plasma (cell) membrane: surrounds all cells.
A phospholipid bilayer in which proteins are embedded.
Functions: define the cell boundary; regulate the entrance and exit of molecules in and out of the cytoplasm.
Cytoplasm: fluid component that organelles sit in, containing dissolved molecules and ions.
Allows transport from one side of the cell to the other.
Reservoir for water, nutrients, and wastes.
Cell wall: thick walls of cellulose layers outside of the membrane, sometimes reinforced with lignin.
Highly porous, non-selective.
Functions: provides strength & rigidity; prevents plant cells from exploding from internal water pressure in the large central vacuole.

Nucleus
Function: storage of genetic information; synthesis of DNA and RNA.
Every cell in an organism has exactly the same genetic information, BUT each cell has certain genes that are turned on and others that are turned off.
Activated genes specify the amino acid sequence when a protein is created.
Chromatin: The loose, unbound form of DNA inside the nucleus.
Condenses into chromosomes only right before cell division
Usually in loose form
Nucleolus (plural: nucleoli): a darker region inside the nucleus, where ribosomal RNA (rRNA) is produced.
Nuclear membrane (envelope): the DOUBLE layer that surrounds the nucleus.
Separates the nucleus from the rest of the cell.
Protects the DNA from damage.
Nuclear pores: allow proteins into the nucleus and ribosomal subunits out.

Ribosomes
Composed of two subunits, one large and one small.
Function: protein synthesis
Can be found free in the cytoplasm or attached to the endoplasmic reticulum.

Endoplasmic Reticulum
Composed of channels and flattened vesicles.
Physically continuous with the nuclear envelope.
Rough ER is studded with ribosomes.
Rough ER makes proteins → Those proteins are processed and modified → Vesicles full of those modified proteins then head to the Golgi.
Smooth ER does NOT have ribosomes.
Function: various; lipid synthesis in some cells.
Also forms vesicles, which then head to the Golgi.

Golgi apparatus
Composed of a stack of 3-20 curved “saccules” (flattened spheres) made of membrane.
One side points toward the ER, and the other side points toward the plasma membrane.
Vesicles are often seen on the side of the Golgi.
Function: receives protein and also lipid-filled vesicles that bud from the smooth ER.
Proteins are modified as they pass through the Golgi.
Ex: Glycoproteins have their sugar chains modified.
At the far end, molecules are repackaged in the secretory vesicles.
Those vesicles move to the plasma membrane, where the contents leave the cell.
Lysosome
Structure: membrane-bound vesicles produced by the Golgi that contain hydrolytic digestive enzymes.
Function: Fuse with other vesicles with organic molecules → Vesicle contents are digested by the enzymes.
Ex: Inside white blood cells, lysosomes fuse with vesicles containing pathogens, which are then digested.
Autodigestion: parts of the cell can be digested by its own enzymes.

Vacuole
Composed of a large membranous sac (basically a huge vesicle).
Smaller in animal cells than in plant cells.
Plant cells have a large central vacuole, so full of fluid that it gives added support to the cell.
Function: storage of substances

Energy-related organelles
Includes chloroplasts and mitochondria.
Major function: convert energy into a form that can be used by the cell.
Chloroplasts: turn solar energy into carbohydrates.
Mitochondria: turn carbohydrates into ATP molecules.

Chloroplasts
Perform photosynthesis: 6CO2 + 6H2O + sunlight → C6H12O6 + 6O2
Color: green due to the pigment called chlorophyll.
Structure:
Stroma: outer membrane with a space inside.
Thylakoids: internal membranes that look like flattened stacks.
Thylakoid membranes of grana: chlorophyll is located here, where photosynthesis occurs.
Have their own DNA in the stroma.
Mitochondria
Perform cellular respiration: C6H12O6 + 6O2 → 6CO2 + 6H2O + 38 ATP
All eukaryotic cells contain mitochondria (ie, plant and animal cells).
Structure:
Matrix: an outer membrane with a space inside.
Cristae: internal membranes with folds that increase the surface area for cellular respiration.
ALSO have their own DNA in the matrix.

Cytoskeleton
Structure: a network of interconnected filaments and tubules that extend from the nucleus to the plasma membrane.
Function: maintain cell shape and cause the cell and its organelles to move.
Dynamic meaning: the elements undergo rapid assembly and disassembly.
→ Ex: Formation then disassembly of spindle fibres during mitosis and meiosis.
Include flagella, cilia, and centrioles.

Endosymbiont hypothesis
Mitochondria and chloroplasts are derived from prokaryotes that were engulfed by larger eukaryotic cells.
Mitochondria were once aerobic heterotrophic bacteria.
Chloroplasts were once cyanobacteria.
The host (eukaryotic) cell benefited from the ability to utilize oxygen and synthesize food from these two prokaryotes.
→ These two were taken up and not destroyed.
(*) EVIDENCE:
Similar to their hypothetical bacteria in size and structure.
Bounded by a double-layer membrane: the outer one was derived from the engulfing vesicles; the inner one was from the prokaryotes’ plasma membranes.
Contain a limited amount of genetic information; divide by splitting (binary fission); and have DNA in a circular loop, which is similar to that of the prokaryotes.
Have their own ribosomes, which resemble those of prokaryotes, and produce some proteins.
Their RNA base sequence of ribosomes is similar to that of prokaryotes, solidifying their prokaryotic origins.