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aldehyde
r group and hydrogen attached to carbonyl group
ketone
2 r groups attached to carbonyl group
formaldehyde
simplest aldehyde
used as a preservative
acetone
simplest ketone
used as solvent
aldehydes in nature
vanillin, cinnamaldehyde, carvone (spearmint), benzaldehyde (almond)
ketones in nature
progesterone, testosterone
aldehyde nomenclature
1) identify and name the parent chain, replace “e” with “al”
parent chain must contain the carbonyl carbon, even if it seems like there is a longer parent chain
2) identify the name of the substituents (side groups)
3) assign a number to each substituent
aldehydic carbon is assigned number 1
4) assemble name alphabetically
ketone nomenclature
1) identify and name parent chain, replace “e'“ with “one”
parent chain must contain the carbonyl carbon, even if it seems like there is a longer parent chain
carbonyl is given lowest possible number
2) identify the name of the substituents (side groups)
3) assign a number to each substituent
4) assemble name alphabetically
oxidation of secondary alcohols
bonds added to oxygen to get it ketone
PCC or strong or mild oxidizing agents can be used because the resulting ketone does not undergo further oxidation
ketone preparation
oxidizing of secondary alcohols
oxidation of primary alcohols
with strong oxidizing agent like sodium bicarbonate → carboxylic acid
with mild oxidizing agent like PCC → aldehyde
nucleophilic addition reactions
the carbonyl carbon is electrophilic due to resonance and inductive effects
carbonyl carbon is attacked by nucleophiles, forming a new sigma bond in exchange for the carbon-oxygen double/pi bond
becomes tetrahedral center
are aldehydes or ketones generally more reactive towards nucleophiles
aldehydes
steric effects
aldehydes are less sterically hindered than ketones because they have small hydrogen atom whereas ketones have two bulkier alkyl groups which restricts access to the electrophilic center
electronic effects
aldehyde has a larger partial positive charge on the carbonyl carbon and only one electron donating alkyl group wheres a ketone has two electron alkyl groups that stabilize the partial positive charge (donates electrons to the partial positive to make it less reactive)
nucleophilic addition under basic conditions
1) nucleophilic attack
2) proton transfer
nucleophilic attack
carbonyl group is attacked by nucleophile which breaks the pi bond and throws electron on oxygen to give it a negative charge, forming an anionic intermediate
proton transfer
anionic intermediate is protonated upon treatment with a mild proton source such as water and the proton breaks bond to generate hydroxide anion and an alcohol
general idea of nucleophilic addittion
nucleophile attacks and forms a negatively charged intermediate which is protonated upon acidic workup in organic chemistry
nucleophilic addition in physiological conditions
in the cell the pH is about 7.4 (slightly basic) and the blood buffer system will protonate
blood buffer system
carbonate and phosphate, acids and bases, proteins to keep blood pH at around 7
main nucleophiles
oxygen, nitrogen, hydrogen
oxygen nucleophiles
water is added to carbonyl to form a hydrate
under basic conditions, -OH is the nucleophile
base catalyzed hydration
1) nucleophilic attack (carbonyl attacked by hydroxide to form anionic intermediate)
2) proton transfer (anionic intermediate is protonated by water to form the hydrate)
acid catalyzed hydration
carbonyl is protonated, the H2O is the nucleophile
1) proton transfer (carbonyl is protonated, rendering it more electrophilic)
2) nucleophilic attack (protonated carbonyl group is attacked by water, forming an oxonium intermediate)
3) proton transfer (oxonium intermediate is deprotonated by water to form the hydrate)
alcohols attacking ketones/aldehydes
under catalytic acid conditions, 1 ketone/aldehyde reacts with 2 alcohols to form an acetal
water comes from the ketone and good leaving groups are the conjugate base of a strong acid
what are good leaving groups
the conjugate base of a strong acid
acetal
formed by acid catalyzed reaction of alcohols with ketones or aldehydes
2 alkoxy groups bonded to central carbon
alkoxy groups
alkyl group bonded to oxygen atom
oxygen nucleophiles acid catalyzed reaction of acetone to acetal
part 1:
1) proton transfer (carbonyl group is protonated, making it more electrophilic)
2) nucleophilic attack (alcohol attacks protonated carbonyl to generate oxonium intermediate)
3) proton transfer (oxonium intermediate is deprotonated to form a hemiacetal)
hemiacetal
part 2:
4) proton transfer (OH group is protonated converting it into a leaving group)
5) loss of a leaving group (water leaves to regnerate carbon-oxygen double bond)
6) nucleophilic attack (second molecule of alcohol attacks carbon-oxygen double bond to generate another oxonium intermediate)
7) proton transfer (oxonium intermediate is deprotonated generating an acetal)
hemiacetal
halfway to acetal
oxonium intermediate
oxygen with +1 formal charge and three R groups
electrophilic
polysaccharides
cellulose is a linear polysaccharide of D-glucose units joined by glycosidic bonds
cellulose
important functional group in cell metabolism
acetal in biology
we cannot digest it unless we change steriochemistry on linkages to make it starch
when drawing mechanisms under acidic conditions, what do you start with
proton transfer
when drawing mechanisms under basic conditions what do you start with
nucleophilic attack
catalytic triad
three amino acids found in enzymes
used in nucleophilic addition to carbonyls
allows strong acids and bases to exist simultaneously in active site of an enzyme
how is acetal formation an equilibrium process
for most simple aldehydes, the acetal is favored at the equilibrium
for most ketones, the acetal is not favored at the equilibrium
what happens if a diol is used in oxygen nucleophiles
both equivalents of alcohol come from the same compound and cyclic acetal is formed
how is acetal formation reversible
adding water
when is hemiactel formed
as an intermediate in the conversion of a ketone/aldehyde to an acetal
why are hemiacetals difficult to isolate
it is unstable, very reactive, and quickly forms product
cyclic hemiacetals
occurs when a compound contains both the carbonyl and hydroxy group
can usually be isolated
OH is 6 atoms away from carbonyl and spontaneously forms a cyclic ring
what does an aldehyde/ketone form when it reacts with a primary amine under acidic conditions
an imine
imine
compound with carbon-nitrogen double bond
process of an imine being formed
primary amine in the presence of a catalytic acid
water is removed
carbonyl is replaced with carbon-nitrogen double bond
imines in body
ARE BAD
nitrogen nucleophile reaction mechanism of carbonyl to imine
part 1:
1) nucleophilic attack (amine attacks the carbonyl group)
2) proton transfer (intermediate is protonated to remove the negative charge)
3) proton transfer (deprotonation gives a carbinolamine)
carbinolamine (halfway point)
part 2:
4) proton transfer (OH group is protonated, converting it into an excellent leaving group
5) loss of a leaving group (water leaves and carbon-nitrogen double bond is formed)
6) proton transfer (intermediate is deprotonated to generate an imine)
why is the protonation of the carbonyl not the first step of imine formation mechanism
the ammonium ion is not acidic enough to protonate a negatively charged oxygen, or an alcohol
what is a good leaving group
conjugate base of a strong acid
what is the correct pH for imine formation and why
around 5 or it is too slow
so having a pH of 7.4 in cells is good because we do not want this reaction to occur
lower pH → all the amines are protonated, so none are available to attack the carbonyl
higher pH → not enough acid to catalyze the reaction effectively
things to keep in mind for mechanisms
under acidic conditions, reaction species should either be neutral or have a +1 formal charge, should not end up a negative charge
in the active site of an enzyme, the catalytic triad allows acids and bases to exist simultaneously
hydrolysis
adding water to destroy something
hydrolysis of acetals
reverse of acetal formation
hydrolyzed with aqueous acid to yield ketone or alcohol and two equivalents of alcohol
acetals only react with water under acid conditions beca
hydrolysis of acetals mechanism (acetal to ketone)
part 1:
1) proton transfer (carbonyl group is protonated, rendering it more electrophilic)
2) loss of a leaving group (a molecule of alcohol (ROH) is ejected as a leaving group)
3) nucleophilic attack (water functions as a nucleophile and attacks the powerful electrophile)
4) proton transfer (water functions as a base and removes a proton, giving a hemiacetal)
hemiacetal (halfway point)
part 2:
5) proton transfer (hemiacetal is protonated, generating an excellent leaving group)
6) loss of a leaving group (molecule of ROH is ejected as a leaving group)
7) proton transfer (water functions as a base and removes a proton, giving a ketone)
hydrolysis of imines and enamines
reverse of their formation
enamines
samething as imine, but has a double bond nearby reversed with water
amine attached to alkene
alpha carbon
carbon closest to carbonyl
properties of alpha carbon-hydrogen bond
weakly acidic
dipole (partially negative oxygen, partially positive carbon)
enols
organic compound containing a hydroxyl group directly bonded to alkene carbon
when do ketones and aldehydes exist in equilibrium with an enol
in the presence of an acid or a base
tautomers
2 different isomers at equilibrium that are acid or base catalyzed
what are ketones and aldehydes to each other
enol tautomers of one another
what does the equilibrium generally favor in a ketone/aldehyde and enol reaction
the ketone/aldehyde
bicarbonate base
base that is a component of the blood buffer system
in blood is a ketone/aldehyde and enol reaction acid or base catalyzed
base
exception where enol is favored in the equilibrium
because the enol is stabilized by conjugation and intramolecular H-bonding it is more stable than a typical enol
aldehyde/ketone to enol mechanism under basic conditions
alpha carbon is deprotonated to form a resonance stabilized anion (enolate) and the anionic intermediate is protonated to give the enol
aldehyde/ketone to enol mechanism under acidic conditions
the carbonyl is protonated to form a resonance stabled cation, then the cationic intermediate is deprotonated to give the enol
is the alpha position in an enol nucleophilic
yes
alpha halogenation under acidic conditions
enol is the reactive intermediate
mechanism for alpha halogenation under acidic conditions
part 1: enol formation
1) proton transfer (carbonyl group is protonated to form a resonance stabilized cation)
2) proton transfer (cationic intermediate is deprotonated to give an enol)
part 2: halogenation
3) nucleophilic attack (enol functions as nucleophuile and attacks molecular bromine)
4) proton transfer (proton is removed)
alpha halogenation under basic conditions
enolate is the reactive intermediate
mechanism for alpha halogenation under basic conditions
1) deprotonation (of carbonyl)
2) nucleophilic attack
what typically occurs under basic conditions in alpha halogenation
poly-halogenation
what is poly halogenation
substitution of multiple hydrogen atoms with halogen atoms
in polyhalogenation what happens once the ketone is brominated
it forms an enolate and brominates again at an even faster rate
what are methyl ketones converted to under basic conditions
carboxylic acids using halogen and hydroxide
Haloform Reaction
methyl ketones getting converted to carboxylic acids using halogen and hydroxide under basic conditions
in alpha halogenation after all three alpha protons are replaced, what happens
the CBr3 acts as a good leaving group and acyl substitution occurs
acyl substitution
nucleophile replaces leaving group attached to carbonyl carbon, converting one carboxylic into another
tetrahedral intermediate
resulting carboxylic acid is deprotonated under basic conditions that forces reaction to completion
aldol additions
when an aldehyde is treated with hydroxide (or alkoxide) an equilibrium forms where significant amounts of both enolate and aldehyde are present
what reaction occurs when an enolate attacks the aldehyde
an aldol addition reaction
aldol
aldehyde and alcohol
OH on beta carbon
aldol addition equilibrium
aldehydes → aldol product is favored
ketones → aldol product is not favored
aldol addition mechanism under basic conditions
1) proton transfer (alpha carbon is deprotonated to form an enolate)
2) nucleophilic attack (enolate serves as a nucleophile and attacks an aldehyde)
3) proton transfer (resulting alkoxide ion is protonated to give the product)
aldol condensations
loss of water
occurs when an aldol addition is performed at elevated temps under acid or basic conditions
a trans alpha-beta unsaturated carbonyl forms
aldol condensation mechanism
part 1: aldol addition
1) proton transfer (the alpha position is deprotonated to form an elonate)
2) nucleophilic attack (enolate serves as nucleophile and attacks an aldehyde)
3) proton transfer (the resulting alkoxide ion is protonated)
part 2: elimination of water
4) proton transfer (alpha carbon is deprotonated to form enolate)
5) loss of a leaving group (hydroxide is ejected to afford the product)