Chapter 18: Metabolic Pathways and Energy Production

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Metabolism

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65 Terms

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Metabolism

All the chemical reactions that provide energy and the substances required for continued cell growth.

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Catabolic Reactions

These are complex molecules are broken down to simpler ones with an accompanying release of energy.

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Anabolic Reactions

These utilize energy available in the cell to build large molecules from simple ones.

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Adenosine Triphosphate (ATP)

A high-energy compound that stores energy in the cells. It consists of adenine, a ribose sugar, and three phosphate groups.

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Cell membrane

It separates the contents of a cell from the external environment and contains structures that communicate with other cells.

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Cytoplasm

It consists of the cellular contents between the cell membrane and nucleus.

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Cytosol

It is the fluid part of the cytoplasm that contains enzymes for many of the cell’s chemical reactions.

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Endoplasmic reticulum

It is the rough type processes proteins for secretion and synthesizes phospholipids; smooth type synthesizes fats and steroids.

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Golgi complex

It modifies and secretes proteins from the endoplasmic reticulum and synthesizes cell membranes.

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Lysosome

It contains hydrolytic enzymes that digest and recycle old cell structures.

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Mitochondrion

It contains the structures for the synthesis of ATP from energy-producing reactions.

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Nucleus

It contains genetic information for the replication of DNA and the synthesis of protein.

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Ribosome

It is the site of protein synthesis using mRNA templates.

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salivary glands

Enzymes produced in the _______ hydrolyze some of the 𝜶-glycosidic bods in amylose and amylopectin, producing maltose, glucose, and dextrins — which contain three to eight glucose units.

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Glucose

It is the primary energy source for muscle contractions, red blood cells, and the brain.

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Emulsification

A process where the bile salts break the fat globules into micelles.

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pancreas

Enzymes from the ______ hydrolyze the triacylglycerols to yield monoacylglycerols and fatty acids, which are then absorbed into the intestinal lining where they recombine to form triacylglycerols.

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Chylomicrons

The nonpolar compounds are then coated with proteins to form lipoproteins which are more polar and soluble in the aqueous environment of the lymph and bloodstream.

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Oxidation

A reaction that involves the loss of hydrogen or electrons by a substance, or an increase in the number of bonds to oxygen.

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Reduction

A reaction that involves the gain of hydrogen ions and electrons or a decrease in the number of bonds to oxygen.

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Nicotinamide adenine dinucleotide (NAD+)

An important coenzyme in which the vitamin niacin provides the nicotinamide group, which is bonded to ribose and ADP.

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Flavin adenine dinucleotide (FAD)

A coenzyme that contains ADP and riboflavin.

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Riboflavin

Also known as Vitamin B2, consists of ribitol and flavin.

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Coenzyme A

  • Its function is to prepare small acyl groups for reactions with enzymes.

  • The thiol group which bonds to a two-carbon acetyl group to produce the energ yrich thioester acetyl-CoA.

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Glycolysis

  • A pathway wherein the glucose in the bloodstream enters our cells where it undergoes degradation.

  • It is an anaerobic process; no oxygen is required.

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Energy-investing phase

The energy is obtained from the hydrolysis of two ATP, which is needed to form sugar phosphates; the first five reactions.

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Energy-generating phase

The energy is obtained from the hydrolysis of the energy-rich phosphate compounds and used to synthesize four ATP; the last five reactions (6-10).

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pyruvate

The _____ produced from glucose can now enter pathways that continue to extract energy.

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Aerobic Conditions

  • In glycolysis, two ATP were generated when one glucose molecule was converted to two pyruvates.

  • Under these conditions, pyruvate moves from the cytoplasm into the mitochondria to be oxidized further.

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Anaerobic Conditions

  • When we engage in strenuous exercise, the oxygen stored in our muscle cells is quickly depleted.

  • Under these conditions, pyruvate remains in the cytoplasm where it is reduced to lactate.

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Citric Acid Cycle

  • A series of reactions that connects the intermediate acetyl-CoA from the metabolic pathways in stages 1 and 2 with electron transport and the synthesis of ATP in stage 3.

    • It is also known as the tricarboxylic acid (TCA) cycle or the Krebs cycle.

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Citric Acid

A tricarboxylic acid, which forms in the first reaction.

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electron transport

In _____, hydrogen ions and electrons from NADH and FADH2 are passed from one electron carrier to the next until they combine with oxygen to form H2O.

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Oxidative phosphorylation

The energy released during electron transport is used to synthesize ATP from ADP and Pi.

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Chemiosmotic model

Links the energy from electron transport to a H+ gradient that drives the synthesis of ATP.

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ATP synthase

An enzyme complex that uses the energy released by H+ ions returning to the matrix to synthesize ATP from ADP and Pi .

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Beta-oxidation

This is where fatty acids undergo the removal of two-carbon segments, one at a time, from the carboxyl end.

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Fatty Acid Activation

It combines fatty acid with coenzyme A to yield fatty acyl-CoA. The energy for the activation is obtained from the hydrolysis of ATP to give AMP and two inorganic phosphates.

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Ketone Bodies

The products of ketogenesis: are acetoacetate, 𝜷-hydroxybutyrate, and acetone.

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Ketosis

A condition of the accumulation of ketone bodies; which occurs in severe diabetes, diets high in fat and low in carbohydrates, alcoholism, and starvation.

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Transamination

  • An 𝜶-amino group is transferred from an amino acid to an a-keto acid, usually a-ketoglutarate.

    • A new amino acid and a new 𝜶-keto acid.

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Oxidative Deamination

The ammonium group in glutamate is removed as an ammonium ion.

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Urea Cycle

  • A series of reaction that detoxifies ammonium ion by forming urea.

  • The ammonium ion, which is the end product of amino acid degradation, is toxic if it is allowed to accumulate.

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Reaction 1: Phosphorylation

In the initial reaction, a phosphate group from ATP is added to glucose to form glucose6-phosphate and ADP.

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Reaction 2: Isomerization

The glucose-6-phosphate, the aldose from reaction 1, undergoes isomerization to fructose6-phosphate, which is a ketose.

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Reaction 3: Phosphorylation

The hydrolysis of another ATP provides a second phosphate group, which converts fructose-6-phosphate to fructose-1,6-bisphosphate.

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Reaction 4: Cleavage

Fructose-1,6-bisphosphate is split into two three-carbon phosphate isomers: dihydroxyacetone phosphate and glyceraldehyde-3-phosphate.

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Reaction 5: Isomerization

Because dihydroxyacetone phosphate is a ketone, it cannot react further. However, it undergoes isomerization to provide a second molecule of glyceraldehyde-3-phosphate, which can be oxidized.

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Reaction 6: Oxidation and Phosphorylation

  • The aldehyde group of each glyceraldehyde-3-phosphate is oxidized to a carboxyl group by the coenzyme NAD+, which is reduced to NADH and H+.

  • A phosphate group adds to each of the new carboxyl groups to form two molecules of the high-energy compound, 1,3-bisphosphoglycerate.

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Reaction 7: Phosphate Transfer

  • Phosphorylation transfers a phosphate group from each 1,3-bisphosphoglycerate to ADP to produce two molecules of the high-energy compound ATP.

  • At this point in glycolysis, two ATP are produced, which balance the two ATP consumed in reactions 1 and 3.

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Reaction 8: Isomerization

Two 3-phosphoglycerate molecules undergo _______, which moves the phosphate group from carbon 3 to carbon 2 yielding two molecules of 2-phosphoglycerate.

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Reaction 9: Dehydration

Each of the phosphoglycerate molecules undergoes _______ (loss of water) to give two high-energy molecules of phosphoenolpyruvate.

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Reaction 10: Phosphate Transfer

In a second direct phosphorylation, phosphate groups from two phosphoenolpyruvate are transferred to two ADP to form two pyruvate and two ATP.

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Reaction 1: Formation of Citrate

In the first reaction of the citric acid cycle, the acetyl group from acetyl-CoA bonds with oxaloacetate to yield citrate.

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Reaction 2: Isomerization

  • The citrate produced in reaction 1 contains a tertiary alcohol group that cannot be oxidized further

  • The citrate undergoes _______to yield its isomer isocitrate, which provides a secondary alcohol group that can be oxidized in the next reaction.

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Reaction 3: Oxidation and Decarboxylation

  • The secondary alcohol group in isocitrate is oxidized to a ketone.

  • A decarboxylation converts a carboxylate group to a CO2 molecule producing 𝜶-ketoglutarate.

  • The oxidation reaction also produces hydrogen ions and electrons that reduce NAD+ to NADH and H+.

  • This reduced coenzyme NADH will be important in the energy-producing reactions we will discuss in electron transport

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Reaction 4: Oxidation and Decarboxylation

𝜶-ketoglutarate undergoes oxidation and decarboxylation to produce a four-carbon group that combines with CoA to form succinyl-CoA

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Reaction 5: Hydrolysis

Succinyl-CoA undergoes _____to succinate and CoA. The energy released is used to add a phosphate group to GDP which yields GTP.

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Reaction 6: Oxidation

Hydrogen is removed from each of two carbon atoms in succinate, which produces fumarate, a compound with a trans double bond.

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Reaction 7: Hydration

_______ adds water to the double bond of fumarate to yield malate, which is a secondary alcohol.

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Reaction 8: Oxidation

The last step of the citric acid cycle, the secondary alcohol group in malate is oxidized to oxaloacetate, which has a ketone group.

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Complex I

  • Electron transport begins when NADH transfers hydrogen ions and electrons to complex I and forms the oxidized coenzyme NAD+.

  • The hydrogen ions and electrons are transferred to the mobile electron carrier coenzyme Q 1CoQ2, which carries electrons to complex II.

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Complex II

Q also obtains hydrogen ions and electrons from FADH2, generated by the conversion of succinate to fumarate in the citric acid cycle, which yields QH2 and the oxidized coenzyme FAD.

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Complex III

Two electrons are transferred from the mobile carrier QH2 to cytochromes and to cytochrome c.

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Complex IV

Four electrons from four cytochrome c are passed to other electron carriers until the electrons combine with hydrogen ions and oxygen O2 to form two molecules of water.

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