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normal resident microbiota
microbes that engage in mutual or commensal associations with humans belong to this
infection
a condition in which pathogenic microbes penetrate host defenses, enter tissues, and multiply
pathogen
microbe acting as infectious agent
infectious disease
an infection that causes damage or disruption to tissues and organs
transients
microbes that occupy the body for only short periods
residents
microbes that become established
human microbiota
skin and its contiguous mucous membranes, upper respiratory tract (oral cavity, pharynx, nasal mucosa), go tract (mouth, colon, rectum, anus), outer opening of urethra, external genitalia, vagina, external ear and canal, external eye (lids, lash follicles)
origins of resident microbiota
generally stable, but fluctuates with general health, age, diet, hygiene, hormones, drug therapy
microbial antagonism
microbiota benefits host by preventing overgrowth of harmful microbes
endogenous infections
occur when normal flora is introduced to a site that was previously sterile
initial colonization of fetus and newborn
uterus normally sterile until just before birth, subsequent handling and feeding of newborn continue to introduce what will be normal flora, nature of the microbiota initially colonizing large intestine is influenced by whether the baby receives breast milk or formula
skin microbiota: 2 cutaneous populations
transients: cling to the surface but do not grow there, influenced by hygiene
residents: stable, predictable, less influenced by hygiene, primarily bacteria, yeasts
microbial residents of gi tract
long hollow tube, bounded by mucous membranes, tube is exposed to environment, variations in flora distribution due to shifting conditions, oral cavity, large intestine, rectum harbor appreciable flora
microbiota of the mouth
most diverse and unique flora of the body, aerobic, teeth eruption establishes anaerobic habitat in the gingival crevice favoring colonization by anaerobic bacteria
adaptive niches in microhabitats
cheek epithelium, gingiva, tongue, floor of the mouth, tooth enamel
microbiota of large intestine
anaerobic bacteria, many species provide useful byproducts to host, fermentation of waste materials in the feces generates vitamins and acids
inhabitants of the respiratory tract
oral streptococci, first organisms to colonize, nasal entrance, nasal vestibule, anterior nasopharynx (staphylococcus aureus), mucous membranes of nasopharynx (neisseria species), tonsils and lower pharynx
microbiota of the genitourinary tract
sites that harbor microflora (females: vagina and outer opening of urethra, males: anterior urethra) iInternal reproductive organs kept sterile through physical barriers, kidney, ureter, bladder, upper urethra kept sterile by urine flow and bladder emptying, changes in physiology influence composition of normal flora
probiotics
introducing known microbes back into the body
primary pathogens
capable of causing disease in healthy persons with normal immune defenses, Influenza virus, plague bacillus, malarial protozoan
opportunistic pathogens
cause disease when the host's defenses are compromised or when they grow in part of the body that is not natural to them, Pseudomonas sp. and Candida albicans
virulence factor
characteristic or structure that contributes to the ability of a microbe to cause disease
portal of entry
characteristic route a microbe follows to enter the tissues of the body
exogenous agents
agents originate from sources outside the body
endogenous agents
already exist on or in the body (normal flora)
portals of entry examples
skin: nicks, abrasions, punctures, incisions
gi tract: food, drink, other ingested materials
respiratory tract: oral/nasal cavities
urogenital tract: sexual, displaced organisms
transplacental
TORCH
pathogens that infect during pregnancy
T: toxoplasmosis, O: other diseases (syphilis, varicella-zoster virus, parvovirus B19, HIV)
R: rubella, C: cytomegalovirusand
H: herpes simplex virus
hep b ca
Hepatitis B virus
hep b s&s
s&s may not be apparent until years after initial infection, general ill health, jaundice, abdominal pain, fatigue, nausea, vomiting, appetite loss, fever, dark urine, jt pain
hep b long-term effects
chronic infection occurs in: 90% of infants infected at birth, can develop cirrhosis liver failure
hep b transmission
blood from an infected person• sex with an infected person without using a condom, sharing drugs, needles, needle sticks or sharps exposures, birth, HBV can survive outside the body at least 7 days and still be capable of causing infection
hep b epidemiology
new infections decling, 20-49 yrs, asian/pacific islanders
hep b pathogenesis
bloodstream carries to liver; HBsAg allows virus to attach, liver damage likely from cell-mediated immune response
hep b prevention
vaccine, latex condoms, correctly and everytime, infants born to HBV-infected mothers- vaccine within 12 hrs after birth.• no drugs with needles, do not share personal items that might have blood on them (razors, toothbrushes)
hep b tx
5 different drugs
infectious dose
minimum number of microbes required for infection to proceed, microbes with small IDs have greater virulence
adhesion
microbes gain a stable foothold at the portal of entry; dependent on binding between specific molecules on host and pathogen: fimbriae, pili, flagella, capsules
exoenzymes
bacteria produce extracellular enzymes that dissolve barriers and penetrate through or between cells to invade underlying tissues
endotoxins
secreted by bacteria damage target cells, which die and begin to slough off
blocked phagocytic response
encapsulated bacteria can escape phagocytosis and continue to grow and cause further infections
toxins
specific chemical product of microbes, plants, some animals that has poisonous effects on other organisms
toxinoses
adverse effects of toxins
toxemias
when the toxin is spread by the blood from the site of infection
intoxications
caused by ingestion of toxins
endotoxins
bacterial toxin, not secreted, but released after the host cell is damaged, composed of part of the outer membrane of gram-negative cell walls - lipopolysaccharide
exotoxins
secreted by a living bacterial cell into the infected tissue, strong specificity for a target cell, disrupting its membrane, hemolysins, disrupt membrane of red blood cells, A-B toxins
origins and effects of endotoxins and exotoxins
1) target organs are damaged; heart, muscles, blood cells, intestinal tract show dysfunctions
2) general physiological effects: fever, malaise, aches, shock
process of infection and disease
1) incubation period: time from initial contact with the infectious agent to the appearance of first symptoms, agent is multiplying but damage is insufficient to cause symptoms, several hours to several years
2) prodromal stage: vague feelings of discomfort, nonspecific complaints
3) period of invasion: multiplies at high levels, becomes well-established, more specific signs and symptoms
4) convalescent period: as person begins to respond to the infection, symptoms decline
localized infection
microbes enter the body and remains confined to a specific tissue
systemic infection
infection spreads to several sites and tissue fluids usually in the bloodstream
focal infection
when infectious agent breaks loose from a local infection and is carried to other tissues
mixed infection
several microbes grow simultaneously at the infection site (polymicrobial)
primary infection
initial infection within a given patient
secondary infection
subsequent infection by a different microbe
acute infection
comes on rapidly, severe but short-lived effects
chronic infection
progress and persist over long period of time
patterns of infection
a) localized infection, pathogen is restricted to one specific site
b) systemic infection, pathogen spread through circulation to many sites
c) focal infection, starts and a local infection, but microbe is carried to other sites systemically
d) mixed infection, one site infected with many microbes at the same time
e) primary-secondary infection, an initial infection is complicated by a second one in the same ordifferent location caused by different microbes.
sign
objective evidence of disease as noted by an observer
symptom
subjective evidence of disease as sensed by the patient
inflammation
earliest symptoms of disease as a result of the activation of the body defenses: fever, pain, swelling, edema, granulomas and abscesses (walled-off collections of inflammatory cells and microbes), lymphadenitis (swollen lymph nodes)
leukocytosis
increase in white blood cells
leukopenia
decrease in white blood cells
septemia
microorganisms are multiplying in the blood and present in large numbers
bacteremia
small numbers of bacteria present in blood not necessarily multiplying
viremia
small number of viruses present not necessarily multiplying
asymptomatic
no noticeable or typical symptoms
inapparent (subclinical) infections
although infected, the host doesn't show any signs of disease
typhoid fever ca
Salmonella typhi
typhoid fever s&s
persistent, high fever, headache, constipation, malaise, chills, myalgia, diarrhea uncommon, vomiting not usually severe, confusion, delirium, intestinal perforation, death may occur, tcp: 6-30 days
typhoid fever epidemiology
travelers, sequelae: w/o therapy, may last for 3-4 wks, poverty
typhoid fever transmission
fecal/oral, contaminated food or water, street vended foods
typhoid fever pathogenesis
bacteria invade the small intestine and enter bloodstream temporarily, lyses in the cells, re enter the bloodstream
typhoid fever tx
antibiotic therapy shortens the course of typhoid fever and reduces the risk of death, chloramphenicalty
typhoid fever prevention
oral live vaccine
exit portals
respiratory and salivary: mucus, sputum, nasal drainage, saliva
epithelial cells: skin, scalp
fecal exit, urogenital tract, removal of blood or bleeding
latency
after the initial symptoms in certain chronic diseases, the microbe can periodically become active and produce a recurrent disease, person may or may not shed it during the latent stage
chronic carrier
person with a latent infection who sheds the infectious agent
sequelae
long-term or permanent damage to tissues or organs
epidemiology
study of the frequency and distribution of disease and other health-related factors in defined human populations
reservoir
primary habitat of pathogen in the natural world: human or animal carrier, soil, water, plants
source
individual or object from which an infection is actually acquired
asymptomatic carrier
shows no symptoms
healthcare-associated carrier
contaminated healthcare provider transfers them to other patients
incubation carriers
spread the infectious agent during the incubation period
convalescent carriers
recuperating without symptoms
chronic carrier
individual who shelters the infectious agent for a long period
vector
a live animal (other than human) that transmits an infectious agent from one host to another: fleas, mosquitoes, flies, and ticks, mammals, birds, lower vertebrates
biological vectors
actively participate in a pathogen's life cycle
mechanical vector
not necessary to the life cycle of an infectious agent and merely transports it without being infected
west nile virus ca
Flaviviridae a type of Arbovirus
west nile virus epidemiology
bite of an infected mosquito, mosquitoes become infected when they feed on infected birds
west nile virus s&s
80% asymptomatic, icp: 2-14 days, fever, headache, fatigue, skin rash on the trunk of the body (occasionally), swollen lymph glands (occasionally), eye pain (occasionally)
west nile virus neuroinvasive s&s (west nile encephalitis)
alteration of consciousness, which may be mild and result in lethargy but may progress to confusion or coma, focal neurologic deficits, including limb paralysis and cranial nerve palsies, may be observed, tremors and movement disorders also have been noted
west nile virus pathogenesis
virus replicates within WBC of the skin, WBC's carry virus to lymph nodes where it enters the blood stream, virus can cross the BBB and travel into the CNS infecting brain stem and spinal cord neurons
west nile virus tx and prevention
supportive care, no vaccine, repellant with DEET
zoonosis
infection indigenous to animals naturally transmissible to humans, impossible to eradicate the disease without eradicating the animal reservoir
communicable disease
when an infected host can transmit the infectious agent to another host and establish infection in that host, a highly communicable disease is contagious
non-communicable infectious disease
does not arise through transmission from host to host, occurs primarily when a compromised person is invaded by his or her own microbiota, contact with organism in natural, non-living reservoir
direct contact
physical contact or fine aerosol droplets
indirect contact
passes from infected host tointermediate conveyor andthen to another host• Vehicle - inanimatematerial, food, water,biological products,fomites• Airborne - dropletnuclei, aerosols