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human microbiome
All microbes found on and in a normal human; vital to health and physiology.
resident microbiota
Long-term colonizers that typically do not cause disease.
infection
Microbes bypass defenses, enter tissues, and multiply.
disease
Health deviation due to infection damaging tissues/organs.
infectious disease
Disease caused directly by microbes or their products.
microbial antagonism
Competition between microbes that prevents displacement of normal biota.
symbiosis
Relationship where at least one organism depends on the other; applies to host-microbiota.
pathogen
Microbe that causes infection and disease via parasitism.
pathogenicity
Microbe’s potential to cause disease.
true pathogen
Causes disease in healthy individuals.
opportunistic pathogen
Causes disease when defenses are compromised or in unnatural body sites.
virulence
Severity of disease caused; degree of pathogenicity.
virulence factor
Microbial trait that helps establish infection and cause damage.
portal of entry
Site or method of microbe entry into the body.
exogenous infection
Originates from outside the body.
endogenous infection
Originates from within the host.
infectious dose (ID)
Minimum number of microbes needed to cause infection.
adhesion
Microbial attachment to host tissues via specific molecules.
Adhesion (ligand)
Pathogen molecule that binds to host receptors.
receptor
Host molecule that binds microbial adhesins.
phagocyte
Immune cell that engulfs and destroys pathogens.
leukocidin
Toxin that kills phagocytes.
capsule/slime layer
Structures that inhibit phagocytosis.
antiphagocytic factor
Trait that helps microbes evade phagocytosis.
exoenzyme
Secreted enzyme that damages host tissues and promotes spread.
toxin
Poisonous microbial product that harms host cells.
exotoxin
Secreted protein toxin; specific and potent in small amounts.
endotoxin
Lipid toxin (LPS) from gram-negative bacteria; causes systemic effects when released.
portal of exit
Route by which pathogens leave the host to infect others.
local infection
Confined to a small area.
systemic infection
Spread throughout the body.
focal infection
Starts locally, then becomes systemic.
primary infection
Initial acute infection.
secondary infection
Follows primary infection due to weakened defenses.
acute disease
Rapid onset, short duration.
chronic disease
Slow development, long duration.
asymptomatic infection
Active infection without noticeable symptoms.
symptom
Subjective change felt by the patient (e.g., fatigue, nausea).
sign
Objective, measurable change (e.g., fever, vomiting).
syndrome
Group of signs/symptoms that define a disease.
incubation period
Time between pathogen contact and symptom onset.
prodromal stage
Early vague symptoms (e.g., malaise, aches).
acute phase
Peak infection; high microbial activity and symptoms.
convalescent period
Recovery phase; symptoms decline, health returns.
continuation phase
Symptoms persist or pathogen lingers after recovery.
reservoir
Natural habitat where a pathogen originates.
transmitter
Source from which infection is acquired.
carrier
Infected individual who spreads disease without symptoms.
zoonois
Animal-origin infection transmissible to humans.
fomite
Nonliving object that transmits pathogens.
vehicle
Nonliving medium (air, water, soil, food) that transmits pathogens.
vector
Living organism (often arthropod) that transmits pathogens.
communicable disease
Spread from one host to another.
contagious disease
Easily and rapidly spread between hosts.
noncommunicable disease
Not spread between hosts.
horizontal transmission
Spread between individuals in a population.
vertical transmission
Passed from parent to offspring (e.g., placenta, milk).
direct contact
Transmission via close physical interaction.
indirect contact
Transmission via objects or substances.
vector transmission
Transmission via arthropods or other organisms.
Healthcare-associated infection (HAI) (nosocomial infection)
Infection acquired during medical treatment.
compromised host
Individual with weakened defenses due to illness or procedures.
biofilm
Microbial community on surfaces (e.g., catheters); promotes infection.
infection control committee
Group overseeing infection prevention in large facilities.
infection control officer
Individual responsible for infection control in smaller facilities.
epidemiology
Study of disease frequency and distribution in populations.
etiologic agent
Cause of infection and disease.
case reporting
Legal requirement to report notifiable diseases.
incidence
Number of new cases in a time period; measures risk.
prevalence
Total number of cases (new + existing); measures disease burden.
mortality rate
Number of deaths due to a disease.
morbidity rate
Number of people afflicted with a disease.