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T/F: Filamentous temperature-sensitive mutations in the fts genes cannot divide normally at 42°C and instead produce long filaments, but can divide normally at 37°C.
True
Why do ftsZ mutants that produce long filaments die?
Because they become too large and face problems with their surface:volume ratio
Which of the following methods to control microbial growth does not actually kill microbes?
Filtration
Bacterial replication starts at the ______________ site, with the replication machinery making a replication bubble called __________, and then ends at the _________ site.
ori, theta, ter
What happens if the promoter sequence in a gene is mutated relative to the bacterial promoter consensus sequence?
The mRNA is translated at a lower level
T/F: The ribosome technically does not do the translation from RNA to protein
True
Why would it be advantageous for a bacterium to have the direction of gene transcription be the same as the direction of replication?
To avoid collisions between RNA polymerase and the DNA replication mahinery
If stretched out, the bacterial chromosome would be longer than the length of the cell.
True
T/F: The ribosome technically does not do the translation from RNA to protein.
True
What is the most likely outcome if the promoter sequence of a gene (in DNA) has only one mutation relative to the bacterial promoter consensus sequence?
The mRNA is translated at a lower rate
A sigma factor
Is necessary for RNA polymerase promoter-binding specificity
The E. coli trp operon is sensitive to tryptophan levels in the cell. High levels of tryptophan in the cell
Cause the ribosomes to translate without stalling, forms of a terminator loop
If you were examining an E. coli mutant that had a mutation that severely affected the DNA binding of the LacI repressor, how would transcription of the Lac operon mRNA change, assuming there is lactose but no glucose (i.e. CAP and cAMP are present)?
None because when lactose levels are high the repressor is inactive and the very low level of glucose means CAP enhances transcription to maximal levels
T/F: E coli will use lactose before glucose, its preferred carbon source.
False
Which of the following changes to an E. coli cell would be likely to cause it to be unable to initiate DNA replication? (pick all that apply)
Deletion of DnaA binding sites in oriC
Deletion of AT-rich sequences in oriC
Deletion of the SeqA gene
Deletion of the ter site
Deletion of DnaA binding sites in oriC
Deletion of AT-rich sequences in oriC
Deletion of the SeqA gene
Using error proofreading by the polymerase, a bacterium can duplicate its genome with an error rate of 1 in a billion base pairs. How many errors should I expect to see in genomes of its two daughter cells after binary fission?
none
You randomly mutate an organism, determine the sequence of the mutated DNA, and compare it to the wild-type. Here are both sequences of DNA, starting at the start codon:
Wild-type: ATG GTC TGC AGG AAG TAC GCG GCG
Mutant: ATG GTC TGC AGG AAG TGC GGC GT
What type of mutation have you generated?
Deletion with a frameshift
When doing enrichment screening for histidine auxotrophs, why do we add penicillin?
To increase the proportion of mutants in the flask by killing off wild type cells that are growing
What is a genome?
The complete collection of heritable information stored in DNA of an organism
T/F: Conjugation requires a phage as an intermediate to exchange genes between bacterial cells.
False
Metagenomics is
the study of all the genomes present in one sample (can be environmental source)
T/F: Traditional isolation or culturing techniques are only able to identify less than 1% of bacteria in an environmental sample.
True
You are a graduate student working in a lab. You want to make a mutation in a specific place in the bacterial chromosome. Which would be the best method to use?
CRISPR/Cas9 genome editing
How can mobile elements cause changes in the bacterial genome?
All the options are correct
A transposable element can land inside of an existing gene
A composite transposon can insert a new gene (example: antibiotic resistance gene)
All options are correct
Oxygenic photosynthesis evolved in which of the following groups?
Cyanobacteria
Which bacterial group is known for living in the soil and producing antibiotics.
Actinobacteria
Lactose binds to the lac repressor, causing it to release from the promoter. This is an example of:
Negative control of an inducible gene
T/F: The Plasmodium apicoplast is used to enter red blood cells.
True
How do Spirochetes achieve their spiral shape and corkscrew motility?
They have an axial filament, which is a flagellum inside the periplasm
Which of the following characterizes Actinobacteria?
All of the answers are correct
Mostly live in the soil
Have many antibiotic producing bacteria
Make a fungus-like mycelium
All of the answers are correct
T/F: Yeast have two different mating types that are required for sexual reproduction, but the mating type can be changed at any point in the cells life.
True
What is the role of the macronucleus in Paramecium cell division?
It contains many copies of growth genes to allow cell division