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ecology
the study of how organisms interact with each other and their environment
evolution
underlying process that accounts for the diversity of life on Earth
evolution explains:
unity and diversity
adaptation
an inherited characteristic of an organism that enhances its survival and reproduction in a specific environment
evolution starts with:
same species variation
Darwin’s two major points
descent with modification & natural selection
descent with modification
changes from common ancestors
natural selection
the mechanism behind descent with modification
taxonomy
the branch of biology that names and classifies species into groups of increasing breadth
domains are
the broadest units of classification
number of domains
3
list all domains
archaea, bacteria, and eukarya
list all classification groups
domain, kingdom, phylum, class, order, family, genus, species
scientific name
species + genus
prokaryotes’ domain(s)
archaea & bacteria
chromosomes
discrete units of DNA, within the nucleus of eukaryotic cells
chromatin
the entire complex of DNA and proteins that is the building material of chromosomes
DNA is made up of
deoxyribose, nitrogenous base, and phosphate
DNA helix is held together by
hydrogen bonds
complementary bonding
A only binds to T, G only binds to C
Rosalind Franklin discovered
the double helix structure of DNA
genetic code
the four nitrogenous bases that comprise DNA
DNA’s structure
allows for copying of genetic info
DNA’s sequence
carries info for function
8 types of proteins
enzymatic, defensive, storage, transport, hormonal, receptor, contractile/motor, and structural
protein’s structure
enables its diverse functions
triplet
every 3 DNA bases, that each code for one specific amino acid
advantages of forming gametes
reshuffles genes, doesn’t increase the amount of chromosomes every reproduce
gametic cells
one copy of each chromosome, or half of the full genetic information
meiosis
produces gametes
Why did Gregor Mendel use peas for his experiments?
Many distinct traits, mating could be controlled, able to do both cross fertilization and self fertilization, short generation time
character
heritable feature that varies among individuals
trait
each variant for a character
true breeding
have consistently produced the same phenotype
blending
the general idea before Mendel, the theory that genetic material contributed by parents mixes together
particulate
parents pass on discrete heritable units (genes) that retain their separate identities in offspring
Law of Segregation
2 alleles for a heritable character segregate during gamete formation and end up in separate gametes
monohybrid cross
crossing a homozygous dominant with a homozygous recessive
complete dominance
dominant allele masks recessive allele completely, Mendel’s observation
codominance’s major example
blood types
incomplete dominance
blending
epistasis
the phenotypic expression of a gene that alters that of a gene in a second locus
frequency of dominant alleles
dominant alleles are not necessarily more common in populations
pleiotropy
genes that have multiple phenotypic effects, ex. sickle-cell or cystic fibrosis
epistasis is an example of….
pleiotropy
polygenic inheritance
an additive effect of two or more genes on a single phenotype, ex. height or skin pigmentation
quantitative characters
those that vary in the population along a continuum, usually indicate polygenic inheritance
carriers
heterozygous individuals who carry the recessive allele but are phenotypically normal
consanguineous mating
between two close relatives, increase the chance that both parents can carry the same rare allele
cystic fibrosis
the allele results in a buildup of chloride ions outside the cell and can cause death by the age of 5 if not for modern medicine
Huntington’s disease
a dominant allele disease, but it reveals itself only after 40 years, so you might have already reproduced and passed it to your offspring
sickle cell disease
heterozygotes exhibit some sickle-cell symptoms, but also this advantages heterozygotes to be able to fight malaria, an instance where there is an advantage for carriers (ex. of heterozygote advantage)
heterozygote advantage
an allele might be very disastrous when expressed, but is passed on due to how it supports heterozygotes
amniocentesis
the liquid that bathes the fetus is removed and tested for certain genetic disorders
chorionic villus sampling (CVS)
a sample of the placenta is removed and tested
homologous chromosomes
for 1 type of chromosome there is a second gene in the corresponding location
Morgan’s experiments ….
on fruit flies, provided evidence that genes are physically located on chromosomes
Why did Morgan use fruit flies?
Easy to raise, short generation time, abundant offspring, only 4 pairs of chromosomes
2 types of sex chromosomes
a larger X chromosome and a smaller Y chromosome
human female sex chromosomes
XX
human male sex chromosomes
XY
sex-linked gene
a gene that is located on either sex chromosome
number of genes on the human Y chromosome
only 78, so not a lot of Y linked mutations
number of genes on human X chromosome
~1100 genes
sex chromosomes have …
genes for characters both related and unrelated to gender
X-inactivation
evolved to equilibrate the amount of alleles on X (because men don’t have 2 X chromosomes), one X is suppressed randomly, done to keep the advantage of heterozygosity, happens during development, reversible during gamete formation
Barr body
the chromosome randomly selected during development to be deactivated, densely compacted, attached to nuclear membrane
trisomy in humans
males or females with an extra X chromosome
trisomy 23
Down syndrome
embryos missing a chromosome
are usually not compatible with life
trisomy with sex chromosomes
can lead to fertility issues
trisomy can occur during
1) nondisjunction of homologous chromosomes in the first part of meiosis, 2) nondisjunction of sister chromatids in the second part of meiosis
crossing over causes
recombinant genes
linkage map
mapping of where genes are on a chromosome based on the recombinant rate
centimorgan
unit of measurement for recombinant frequency
at >50% chance of crossing over
you can’t say certainly 2 genes are on the same chromosome
nondisjunction
pairs of homologous chromosomes don’t separate normally during meiosis, and one gamete receives two of the same type of chromosome while the other gamete receives no copy
aneuploidy
the fertilization of gametes in which nondisjunction occurred
monosomic zygote
has only 1 copy of a particular chromosome, usually not compatible with life
trisomic zygote
has 3 copies of a particular chromosome
polyploidy
a condition in which an organism has more than 2 complete sets of chromosomes, more common in plants not animals
triploidy (3n)
3 sets of chromosomes
Turner syndrome
monosomy X, women missing an X chromosome who are sterile, but able to survive
types of mutations
deletion, duplication, translocation, inversion
deletion
removes a chromosomal segment
duplication
repeats a chromosomal segment
inversion
reverses a segment’s sequence within a chromosome
translocation
moves a segment from one chromosome to a non homologous chromosome
genomic imprinting
an epigenetic modification where phenotype doesn’t always directly relate to genotype, affecting any autosomal chromosomes, and depends on if the allele is inherited from mother or father, reversible when gametes are produced
difference between X-inactivation and genomic imprinting
X-inactivation is in sex-linked chromosomes, genomic imprinting is in autosomal
homeostasis
the maintenance of internal stability despite differing environmental conditions (ex. sweating)
8 characteristics of living organisms
cellular composition, order, energy processing, evolutionary adaptation, growth and development, homeostasis, reproduction, response to stimuli
organism
individual living things
organs
collection of tissues and has specific functions in the body
cell
fundamental unit of structure and function, smallest unit of life
community
the array of organisms inhabiting a particular ecosystem
tissue
groups of cells that work together to perform a specialized function
molecules
chemical structure made up of two or more units of things called atoms
ecosystem
all living things in a particular area and non living things with which life interacts
biosphere
consists of all life on earth and the places life exists