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what is the transcriptome
collection of all RNA transcripts in a cell
what is the proteome
collection of all proteins in a cell or tissue
what are some gene therapy strategies
replace missing gene product
stimulate normal and/or block pathological processes
eliminate or inactive toxic proteins
what does replacing a missing gene product entail
adding back biosynthetic component like using a dietary supplement
introducing a new gene into the affect cell
what does it mean to stimulate normal and or block pathological processes
block proliferation of target cells if there is excess proliferation
block blood vessel formation and growth for excessive neovascularization
prevent cell death by adding survival factors or genes that block apoptosis
steps for replacing/adding a gene
identify mutation in patient
clone correct/normal gene
package DNA for normal gene in viral vector
virus infects cells and sends DNA to nucleus
virus DNA cargo expresses long-term and makes correct gene product
strategies for excess proliferation
destroy neovascular tufts
reduce blood vessel growth
kill abnormal cells
removal of tumor
block proliferation
what is a way to destroy neovascular tufts
laser ablation
what is a way to reduce blood vessel growth
block vessel growth signaling pathways
what is a way to kill abnormal cells
chemotherapy
what is way to remove a tumor
surgery
what is a way to block proliferation
antibiotics
what are some solutions to excess cell death
eliminate/inactivate toxic proteins
add survival factors or genes to block apoptosis
what are some neovascular retinal disease
wet AMD
corneal neovascularization
retinopathy of prematurity
diabetic vacsulopathy
characteristics of neovascular ocular disease
excessive blood vessel growth
leakage and edema
vision loss
retinal detachment
therapies for neovascular ocular diseases
eliminate abnormal vessels
block blood vessel growth
eliminate/disable signals for blood vessel growth
manage insulin/sugar levels for diabetes
hot laser destroys abnormal blood vessels
con is that it results in blind spots
laser ablation
systemic (venous) injection of verteporfin drug
laser activates drug and forms blood clots to stop leakage
usually used in combo with other drugs
photodynamic therapy
inhibit, block, and/or destroy VEGFA
cons: requires repeated intraocular injections and could block normal functions of VEGF
molecular therapy to block blood vessel growth
what leads to excessive production of VEGF
hypoxia
complement activation
cellular damage/death
disease
what does high levels of VEGF lead to
vasoproliferation
vasomigration
vasopermeability
ultimately: CNV - choroidal neovascularization
what are aptamers
first ocular anti-VEGF therapy
short RNA oligonucleotides that bind to VEGF and inhibit function
VEGF bound to aptamers cannot bind to receptors on endothelial cells
how are antibodies used in anti-VEGF therapy
antibodies bind to VEGFA so that VEGFs are not able to bind to receptors on endothelial cells
how are decoys used in anti-VEGF therapies
a soluble VEGF receptor protein binds excess VEGF to reduce the amount of free VEGF and prevent/reduce the activation of receptors on endothelial cells
what is RPE65
retinoid isomerohydrolase
an enzyme in the retinoid (visual) cycle that is required for processing retinal ester
what can mutations in RPE65 lead to
LCA - Leber congenital amaurosis
what is the chromophore in the retinoid cycle
11-cis-retinal
when bound to opsin, it absorbs light and starts signal transduction in photoreceptor
light isomerizes 11-cis-retinal to all-trans-retinal