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Ecological niche
A specific role of a species within an ecosystem, including its use of resources, and relationships with other species.
Zones of tolerance
Abiotic variables determine the habitat of a species- where it lives in the ecosystem
Food supply
-Biotic element
-Adaptations are required to access food
Anoxic habitats
Habitats without oxygen (or very little amount of oxygen)
Anoxic habitats examples
-Swamps
-Water-logged soil
-Mud
-Intestinal tracts (guts) of animals
-Deep in lakes or seas
Obligate
Strict
Facultative
Flexible
Obligate aerobes
-Oxygen must be continuously available for aerobic respiration
-All plants and animals
-Micrococcus luteus (a bacterium)
Obligate anaerobes
-Conditions must be anoxic as oxygen kills or inhibits the organism
-Clostridium tetani (tetanus bacterium)
-Methanogenic archaea
Facultative anaerobes
-Oxygen is used if available but anoxic conditions are tolerated
-Escherichia coli (a gut bacterium)
-Saccharomyces (yeast)
Organisms that do photosynthesis
-Plants (mosses, ferns, conifers, and flowering plant)
-Eukaryotic algae (seaweeds and unicellular algae like Chlorella)
-Cyanobacteria
-Occurs only in eukaryotes and bacteria
Holozoic Nutrition
Whole pieces of food are swallowed and are then fully digested
Five stages of getting food in
1. ingestion
2. digestion
3. absorption
4. assimilation
5. egestion
Ingestion
Taking the food into the gut
Digestion
Breaking large food molecules into smaller molecules
Absorption
Transport of digested food across the plasma membrane of epidermis cells and thus into the blood and tissues of the body
Assimilation
Using digested foods to synthesize proteins and other macromolecules; this makes them part of the body's tissues
Egestion
Voiding undigested material from the end of the gut
Animals that digest food externally are not
holozoic
How do some organisms, like spiders, digest food externally
By injecting digestive enzymes into their prey and suck out the liquids produced
-They absorb the products of digestion in their gut and then assimilate them
Mixotrophic
Not exclusively autotrophic or heterotrophic
Facultative mixotroph
Can be entirely heterotrophic, entirely autotrophic, or use both modes
Example of facultative mixotrophs
Euglena gracilis
-Has chloroplast for photosynthesis but also can feed on detritus (dead organisms/waste) or smaller organisms
Obligate mixotrophs
Require both autotrophic and heterotrophic modes of nutrition to survive
Example of obligate mixotrophs
Protists
-Doesn't have own chloroplasts so it consumes algae to get kleptochloroplasts to conduct photosynthesis
Archaea
-Unicellular
-No nucleus
-Some adapted to extreme environments such as hot springs, salt lakes and soda lakes
Soda lakes
Highly alkaline environments of water
Anabolic
Building up/creating
Catabolic
Breaking down
Chemoheterotrophs and energy for ATP production
Oxidation of carbon compounds obtained from other organisms
Chemoheterotrophs and carbon compounds
Obtained from other organisms- not photosynthesis
Photoheterotrophs and energy for ATP production
Absorption of light using pigments (not chlorophyll in archaea)
Photoheterotrophs and carbon compounds
Obtained from other organisms- not photosynthesis
Chemoautotrophs and energy for ATP production
Oxidation of inorganic chemicals, for example Fe2+ ions oxidized to Fe3+ ions
Chemoautotrophs and carbon compounds
Synthesized from carbon dioxide by anabolic reactions
Saprotrophic
Decomposer
How do saprotrophic digest food
They secrete digestive enzymes into dead organic matter around them and digest it externally
-Secretion of proteases to digest proteins into amino acids
What happens if small, soluble products of digestion diffuse to the saprotroph's plasma membrane?
They are absorbed and used
Herbivore teeth
Large and flat to grind fibrous plant tissues
Carnivore teeth
Shaper canines and incisors than herbivores to tear meat
Omnivores
Mix of both types of teeth (e.g humans have flat molars at back of mouth and sharp canines near front)
Insect mouthparts are
Homologous (they come from same ancestral mouthparts)
Insects that feed on leaves
Jaw-like mouthparts with tough mandibles for biting off, chewing, and ingesting
Insects that feed on phloem sap
Sharp, tubular mouthparts for piercing leaves or stems
Insects that feed on nectar
Tubular mouthparts long enough to reach nectar
Varied adaptations plants have had for deterring herbivore attacks
-Sharp spines
-Stings to cause pain
-Synthesis and storage of secondary metabolites that are toxic to herbivores (sometimes in seeds)
Adaptation of trees for harvesting light
Dominant leading shoot, allowing rapid growth in height up to the forest canopy so other trees do not cast shade
Adaptation of lianas for harvesting light
Lianas climb other trees, using them for support, so they need less xylem tissue than free-standing trees
Adaptation of epiphytes for harvesting light
They grow on trunks and branches of trees so they receive higher light intensity than if they grew on the forest floor, but there is minimal soil for their roots
Adaptation of strangler epiphytes for harvesting light
They climb up the trunks of trees, encircle them and outgrow the tree's branches, shading out its leaves
Adaptation of shade-tolerant shrubs and herbs for harvesting light
They absorb the small amounts of light that reach the forest floor
Fundamental niche
The range of abiotic conditions tolerated together with the requirements for biotic factors
Realized niche
Actual extent of potential range that a species occupies
Anthropogenic
Human activities
Caribbean monk seal
-Native to Caribbean Sea and western Atlantic
-Hunted for oil
-Overfishing of coral reefs led to starvation
Giant moa
-Native to New Zealand
-Maori iwi (Polynesian settlers) hunted it to extinction for their meat
Silphium
-Grew in Libya
-Became extinct with arrival of ancient Greeks
-Was used for birth control agent
-Overgrazing and desertification also may have caused it
Endemic species
Species that are native to and found only within a limited area
Mixed dipterocarp forest (MDF) of southeast Asia
-MDF has extremely high diversity
-MDF was targeted for logging and land conversion to palm oil plantations
-Global warming is also another cause
Loss of the Aral Sea
-A major water management scheme diverted two major rivers that fed the Aral sea for irrigation for a desert
-Ultimately led to Aral Sea turning into desert
-Increase in salinity led to ecosystem collapse (endemic species of fish all were extinct)
Agriculture
Main cause of ecosystem loss
Urbanization
Building of homes, offices, factories, roads and railways
Overexploitation
-Gathering of fuel wood, hunting of animals, and fishing
-Loss of single keystone species leads to collapse of ecosystem
Mining and smelting
-Cause pollution and widespread damage
Water management
-Reservoirs created by building dams can flood natural ecosystems
-Extraction of water greatly reduces river flow
Drying of wetlands
Swamps and other wetlands are drained for conversion to agriculture
Leaching
-Washing of fertilizers into rivers and lakes causes eutrophication and algal blooms
-Oligotrophic ecosystems have been lost
Climate change
Anthropogenic climate change is most common cause of loss
Citizen Science
Data collected by individuals who have monitored a population or an ecosystem regularly over many years
Splitters and Lumpers
Opposing factions in any academic discipline that has to place individual examples into rigorously defined categories.
In situ conservation
-Conservation method in which species are in their natural habitats
-Nature reserves, national parks
Rewilding
The return of degraded ecosystems to as natural a state as possible
Ex situ conservation
-Preservation of species outside their natural habitats
-Botanic gardens, zoos
Storage of germ plasm
-Long term ex situ conservation
-Seeds of plants and animal germ plasm are stored in certain conditions
"E" and "D" in EDGE of Existence program
Evolutionary Distinct: does species have few or no close relatives, so it is a member of a very small clade?
"G" and "E" in EDGE of Existence program
Globally Endangered: is the species likely to become extinct because all remaining populations are threatened?