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symptomatic phase of HIV
detected at or below 350 cells/ul
pathologies (early OIs) start to be seen
cell count when you get AIDS
< 200 CD4 cells/ul, host is vulnerable to AIDS defining OIs
> 350 cells/ul
malignancies, direct effects of HIV on brain
asymptomatic phase
CDC definition of AIDS
be HIV positive
have CD4 count of <200 cells/ul
have any variety of pathologies that are considered AIDS-defining illnesses
AIDS defining illnesses categories
viral, bacteria, fungi, protozoa
also worst OIs are only seen at very low CD4 cell count which is rare in US
neurological disease and malignancies can occur at higher CD4 count
factors that affect HIV disease course
viral load
host factors (overall physical health, immune response, extent of lymph node damage during acute infection, CCR5 levels and ligand diversity)
low level of CCR5 means more reistant to immunodepletion
comorbid conditions (other bad pathogens exacerbate disease)
health consequences of ARV managed HIV (these will persist despite ARV)
associated with heightened inflammation (which can lead to scarring which makes it harder for cells to move and communicate with each other aka compromising immune system function), excess risk of cardiovascular disease (due to medication), cancer, neurocognitive dysfunctions
immune system fails because there is collateral damage to immune tissues
acute HIV infection decimates CD4 in gut (major place of HIV infection) and so gut mucosa remains damaged throughout HIV infection
chronic exposure of gut to pathogens yields chronic activation of immune responses which causes collateral damage to uninfected CD4 and CD8 cells
lymph nodes suffer structural damage over time
SIV
animals can be chronically infected but don’t develop AIDS
health levels of peripheral CD4 cells are maintained
less chronic immune activation
mucosal CD4 cells are initially depleted but no progressive loss
memory CD4 cells resist infection due to lower CCR5 lebels
less damaging to mucosal immune system overall
bystander apoptosis
killing of cells nearby that were not intended to be killed
low grade and part of chronic inflammatory response
(a contrast to cytokine storm which is a profound acute inflammatory response)
causes death of neurons (not opportunistic, due to HIV in brain)
can cause HIV related dementia
lymph node/lymphoid tissue destruction: chronic (ongoing) infection yields
involution (return of enlarged organ to its original size; for this it is excessive) of germinal center (inside lymph node and where B cells proliferate)
break down of the follicular dendritic cell network which in germinal centers release the HIV particles that they accumulated on their surfaces
scar tissue building up and affects entire node, compromises ability of B cells to do their job and for cells to move around so downstream consequence of scarring
immune reconstitution inflammatory syndrome (IRIS)
immune reconstitution can be dangerous and you have to treat OIs before giving a patient ARVs
can occur in newly diagnosed HIV+ patients with very low CD4 < 50 cells/ul
a condition where an exaggerated inflammatory response occurs after the immune system improves, often due to antiretroviral therapy (ART) in people with HIV. This inflammatory response can lead to a worsening of existing infections or the appearance of new ones
overly exuberant immune response to pathogen is tissue inflammation at site of infection can cause tissue inflammation at site of infection
likelihood of IRIS depends on type of pathogen and what cells are helped by T cells
macrophages - fungal infections, intracellular bacteria (TB)
lethality of IRIS depends on site in body
brain: tightly enclosed space
lung: breathing
liver: inflammation is bad
antibiotic prophylaxis (common antibiotics) plus ARVs can be used for initial treatment of AIDS patients
TMP-SMX (Bactrim)
Minocycline
Bactrim (TMP-SMX)
early antibiotic which is combination therapy
many people take it and is well tolerated
take for > 72 weeks
used against pneumonia (bacterial), toxoplasmosis (apicomplexan), reduces frequency of malaria (apicomplexan)
targets bacterial dihydrofolate reductase (DHFR)
minocycline
anti-inflammatory used for acne
reduces T-cell activation
inhibits HIV release from latently infected memory T cells
early oral symptoms at CD4 200-350 cells/ul
thrush → can spread down throat and into esophagus, swallowing will be painful
Hair leukoplakia (Epstein-Barr virus, herpes) → not painful and change in taste perception
aphthous ulcers (canker sores) → very painful and can be chronic
early dermatological symptoms at CD4 200-350 cells/ul
shingles (Herpes zoster, re-eruption of chickenpox virus) → chickenpox goes into latent form in nerves and when reactivated, outbreak of herpes blisters along where nerve path is; very painful
catc-scratch (Bacillary angiomatosis, bacterium)
early genital symptoms (female)
yeast infection → overgrown yeast
cervical dysplasia (human papilloma virus) → pre-cancerous cells in cervix; If virus proliferation is not being kept in check by CD4 cell activity on the various killer T cells, you will see evidence of cervical dysplasia
salmonella infections (intracellular bacterium)
GI symptoms (severe)
flu-like symptoms
neurological disorders associated with HIV
not an OI
direct consequences of HIV infection
HIV-associated cognitive disorder (HAND)
peripheral neuropathies → erroneous sensory information; problems in spinal neurons and tinging/burning/numbness in extremities
opportunistic infections
cryptococcal meningitis (fungus)
toxoplasmosis (parasite; latent infection)
JC virus (virus; latent infection)
Almost every AIDS patient has brain damage post mortem
HIV associated dementia
blood-brain barrier
brain has 2 layers of cells
capillary lining makes tight boundary
second layer of cell fencing around capillaries made up of astrocyte cells
monocytes (PBMCs, undifferentiated that will turn into macrophages and dendritic cells), B cells, and some medications can go in but T CELLS CANNOT
Trojan Horse hypothesis
HIV enters CNS by infected PBMCs that go into brain and produce HIV
HIV in brain impacts
macrophages, microglia (type of macrophage), astrocytes (glia)
does not infect neurons
CNS can evolve separately from circulating forms and infected cells in brains are a reservoir distinct from memory T cells
initial infection usually asymptomatic but can cause early encephalitis or meningitis
If you can’t detect HIV in blood, you can’t get it in the brain → undetectable = untransmittable even in your own body
however, CNS inflammation can occur even with undetectable viral load in cerebreospinal fluid (CSF)
progressive multifocal leukoencephalopathy
demyelination (holes in multiple areas of brain)
rapid and aggressive progression
develops over days or weeks
death in weeks to months
Symptoms depend on affected area but generally clumsiness, weakness, and acting different
Diagnosis
tricky cause a lot of symptoms are also true for other pathologies
you look for JC virus in CSF
you can look at MRI
best way is brain bopsy
Treatment
HAART helps have people
CAN CAUSE IRIS
Prognosis
50% of patients are cured but may have long term brain damage
Severe combined immunodeficiency syndrome (SCID)
no T or B cells so need to be protected from everything
B cells make antibodies and CD8 kill infected cells for
some chronic virus infections (herpes and papilloma)
intracellular protozoa (apicomplexa)
cytokines stimulate macrophages to kill pathogens for
intracellular bacteria (mycobacteria in lung and gut, salmonella in gut)
fungi (extracellular like candida, pneumocystis and cryptococcus)
toxoplasmosis
most common CNS OI
CD4 < 100 cells/ul
caused by toxoplasma gondii
protozoan parasite
present worldwide si common endemic
90% of Parisian adults have Abs and 1/3 of humans carry encysted parasites in muscle and brain
sources of exposure: uncooked meat, cat litterbox, produce harvested near cat feces, raw shellfish harvest downstream of cat feces
Apicomplexan parasites
morphological specialization at apical end
allow parasites to crawl along surfaces and burrow into cells
apical complex has organelles that contribute to attachment and invasion of host cell, and establishment of internal vacuole where it divides
allows for invasion, gliding motility, and other specialized behaviors
include malaria, toxoplasmis, and a bunch of gut things
You start with oocyst (egg) which is ingested in both and is very stable. This gets into (excysts) in host bowel and then releases 4 sporozoites and the apical surface of those will allow them to to hang at apical surface of cells. This makes them become trophozoite and they can then divide further, have names, and then proliferate.
sporozite associates with intestinal epithelial cell surface
becomes trophozoite intracellular at apical surface and trophozoite divides forms meront structure which can get released and infect other cells
Names would be like tachyzoite, trophozoite, mereozite and this mitotically divide form can form a meront which has 8 that infect more cells
zoites are mobile and can spread from cell to cell
merozoites can exit gut and infect muscle and brain
latent infection is controlled in immunocomponent host because CD8 T cells kill cells that present Ags via MHC I and CD8 cells also invade cysts to kill Toxo directly
unchecked Toxo replication in brain (or fetus) can cause severe pathology
bradyzoites are the slowly proliferating form in muscle and brain
merozoites differentiate into gametes and can fuse to form diploid zygote but then undergoes meiosis (divide into 4 haploid sporozoites which are packaged into oocyst which is then released in feces of cats)
toxoplasma form cysts containing ___ in host muscle and brain
bradyzoites
CD8 control by killing this
PV = parasitophorous vacuole
formed by secretion of special lipids
how toxoplasma goes into the intestinal mucosal epithelium
HIV associated toxoplasmosis treatment
anti-parasitic drugs like pyrimethamine and Daraprim
HAART to restore CD4 cells
if no obvious symptoms or lesion, you can give TMP-SMX antibiotic prophylaxis if they have Toxoplasma Abs
treatment discontinued once CD4 > 6 months without viral load
IRIS not issue because the drug kills parasite directly
dihydrofolate reductase (DHFR)
important metabolic enzyme in cells that is responsible for making folic acid which is needed for a white variety of molecules → if you inhibit, you can’t get folic acid and so cells die because they can’t make their normal molecules
interfere with bacterial synthesis of folic acid
targeted by TMP-SMX
crytpococcal meningitis
dessicated spores rehydrated in lung
capsule interferes with normal uptake and Ag presentation by macrophages
can get across blood brain barrier and infected macrophages can bring them across
CD4 < 100
symptoms
nausea, headache, fever, confusion
Diagnosis
CAT scan or MRI for brain atrophy
fungus in CSF via India ink stain
cryptococcal antigen in CSF are best indicator
treatment is anti-fungals
can possible lead to IRIS so antifungals for 2-10 weeks before ARVs
pneumocystis pneumonia (PCP)
caused by Pneumocystis jirovecii
most humans exposed early in life
symptoms include fever, night sweats, malaise, weight loss which are all nonspecific
the more specific symptoms include non-productive cough and dyspnea (shortness of breath)
Diagnosis can be hard
chest x-ray doesn’t always reveal various pathologies
sputum analysis may reveal fungi
Bronchoscopy and BAL (bronchoalveolar lavage) yields results half the time
treatment
TMP-SMX which cures initial infection but relapse rate is high
bacterial pneuomonia: streptococcus pneumoniae
very common
recommended for people to get vaccine
diagnosis:
x-ray opacity
sputum sample
culture bacteria from blood
Treatment
antibiotics
if PCP is suspected cause of dry cough you can augment with TMP-SMX
Legionella pneumophila
Legionnaire’s disease
occasional
Haemophilus influenzae
childhood meningitis
Hib vaccine
Myobacterium avium complex (MAC)
uncommon
lung disease
usually precedes GI disease
Tuberculosis
caused by Myobacterium tuberculosis
historically associated with povery and easily spread from person with active TB to another
provided basis for Koch’s postulates of infectious disease
vaccine since 1921 but reemerged in mid 1980s and new vaccine needed
treatment issue is lack of compliance to drugs *usualy one or two because multi drug resistant with MDR TB)
also problem is many TB drugs induce cytochrome P450 so pepatotoxicity
granuloma
pocket of bacteria surrounded by other material like collagen and immune cells to wall off this pocket
protects intracellular bacteria like for TB
Mycobacterium tuberculosis (MTb)
in soil
many genes are devoted to lipid synthesis which contributes to maintenance of chronic latent infection
How Tb remains latent
Tb Ags are hidden in macrophage endosomes, presentation to T cells is impaired in lung walls of infected cells by forming a granuloma = tubercle
infection becomes latent and asymptomatic
diagnosis of latent tuberculosis
Mantoux test: skin test reaction to see if TB antigen is resent by testing for evidence of Abs
also can do MTb specific T cells in blood assay
Not HIV: viral pneumonias - influenza, SARS CoV-2
can lead to ARDS (acute respiratory distress syndrome)
ARDS (acute respiratory distress syndrome)
epithelial cells lining air sacs die so that air sacs fill with fluid and patient drowns
in order to treat this, the lung epithelium needs to regrow completely throw patient being dehydrated (so less edema fluid) and low pressure ventilator (enough air to get in lungs without demaging regrowth of lining of lung) and patient lying in prone position (on stomach)