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polymorphism
presence of 2+ alleles at a locus
P
proportion of polymorphic loci
# polymorphic loci / total # loci sampled
average heterozygosity
H
proportion of heterozygotes, averaged across loci
allelic diversity
A
number of alleles, averaged across loci
proportion of polymorphic loci
P
# polymorphic loci / total # loci sampled
average heterozygosity
H
proportion of heterozygotes, averaged across loci
nucleotide diversity
pi
proportion of different nucleotides between sequences