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biology
the scientific study of life
emergent properties
new properties that arise with each step upward in the hierarchy of life, owing to the arrangement and interactions of parts as complexity increases
systems biology
an approach to studying biology that aims to model the dynamic behavior of whole biological systems based on a study of interactions among the system’s parts
eukaryotic cell
a type of cell with a membrane-enclosed nucleus and membrane-enclosed organelles
prokaryotic cell
a type fo cell lacking a membrane-enclosed nucleus and membrane-enclosed organelles
genes
a discrete unit of hereitary information consisting of a specific nucleotide sequence in DNA
gene expression
the process by which information encoded in DNA directs the synthesis of proteins or, in some cases, RNAs that are not translated into proteins and instead functions as RNAs
genome
the genetic material of an organism or virus; the complete complement of an organism’s or virus’s genes along with its noncoding nucleic acid sequences
genomics
the systematic study of whole sets of genes and their interactions within a species, as well as genome comparisons between species
proteomics
the systematic study of sets of proteins and their properties, including their abundance, chemical modifications, and interactions
proteome
the entire set of proteins expressed by a given cell, tissue, or organism
bioinformatics
the use of computers, software, and mathematical models to process and integrate biological information from large data sets
consumer
an organism that feeds on producers, other consumers, or nonliving organic material
producers
an organism that process organic compounds from carbon dioxide by harnessing light energy (in photosynthesis) or by oxidizing inorganic chemicals
feedback regulation
the regulation of a process by its output or end product
vessel
a continuous water-conducting micropipe found in most angiosperms and a few nonflowering vascular plants
climate change
a directional change in temperature, precipitation, or other aspect of the global climate that lasts for three decades or more
evolution
descent with modification; the process by which species accumulate differences from their ancestors as they adapt to different environments over time
bacteria
one or two prokaryotic domains, the other being archaea
archaea
one of two prokaryotic domains, the other being bacteria
eukarya
the domain that includes all eukaryotic organisms
natural selection
a process in which individuals that have certain inherited traits tend to survive and reproduce at higher rates than other individuals because of those traits
science
an approach to understanding the natural world
inquiry
the search for information and explanation, often focusing on specific questions
data
recorded observations
inductive reasoning
a type of logic in which generalizations are based on a large number of specific observations
hypothesis
a testable explanation for a set of observations based on the available data and guided by inductive reasoning; is a narrower in scope than a theory
experiment
a scientific test; often carried out under controlled conditions that involve manipulating one factor in a system in order to see the effects of changing that factor
deductive reasoning
a type of logic in which specific results are predicted from a general premise
controlled experiment
an experiment designed to compare an experimental group with a control group; ideally, the two groups differ only in the factor being tested
varibles
a factor that varies in an experiment
theory
an explanation that is broader in scope than a hypothesis, generates new hypotheses, and is supported by a large body of evidence
model organism
a particular species chose for research into broad biological principles because it is representative of a larger group and usually easy to grow in a lab
matter
anything that takes up space and has mass
element
any substance that cannot be broken down to any other substance by chemical reactions
compound
a substance consisting of two or more different elements combined in a fixed ratio
essential elements
a chemical element required for an organism to survive, grow, and reproduce
trace elements
an element indispensable for life but required in extremely minute amounts
atom
the smallest unit of matter that retains the properties of an element
neutrons
a subatomic particle having no electrical charge, with a mass of about 1.7 times 10 to the negative 24g, found in the nucleus of an atom
protons
a subatomic particle with a single positive electrical charge, with a mass of about 1.7 times 10 to the negative 24g, found in the nucleus of an atom
electrons
a subatomic particle with a single negative electrical charge and a mass about 1 two-thousandths that of a neutron or proton
atomic nucleus
an atom’s dense central core, containing protons and neutrons
dalton
a measure of mass for atoms and subatomic particles; the same as the atomic mass unit, or amu
atomic number
the number of protons in the nucleus of an atom, unique for each element and designed by a subscript
mass number
the total number of protons and neutrons in an atom’s nucleus
atomic mass
the total mass of an atom, numerically equivalent to the mass in grams of 1 mole of the atom
isotope
one of several atomic forms of an element, each with the same number of protons but a different number of neutrons, thus differing in atomic mass
radioactive isotope
an isotope that is unstable; the nucleus decays spontaneously, giving off detectable particles and energy
half-life
the amount of time it takes for 50 percent of a sample of a radioactive isotope to decay
radiometric dating
a method for determining the absolute age of rocks and fossils, based on the half-life of radioactive isotopes
energy
the capacity to cause change, especially to do work
potential energy
the energy that matter possesses as a result of its location or spatial arrangement
electron shells
an energy level of electrons at a characteristic average distance from the nucleus of an atom
valence electrons
an electron in the outermost electron shell
valence shell
the outermost energy shell of an atom, containing the valence electrons involved in the chemical reactions of that atom
orbital
the three-dimensional space where an electron is found 90 percent of the time
chemical bonds
an attraction between two atoms, resulting from a sharing of outer-shell electrons or the presence of opposite charges of the atoms
covalent bond
a type of strong chemical bond in which two atoms share one or more pairs of valence electrons
molecule
two or more atoms held together by covalent bonds
single bond
a single covalent bond; the sharing of a pair of valence electrons by two atoms
double bond
a double covalent bond; the sharing of two pairs of valence electrons by two atoms
valence
the bonding capacity of a given atoms the number of covalent bonds that an atom can form, which usually equals the number of unpairs electrons in its outermost shell
electronegativity
the attraction of a given atom for the electrons of a covalent bond
non-polar covalent bond
a type of covalent bond in which electrons are shared equally between two atoms of similar electronegativity
polar covalent bond
a covalent bond between atoms that differ in electronegativity; the shared electrons are pulled closer to the more electronegative atom, making it slightly negative and the other atom slightly positive
ions
an atom or group of atoms that has gained or lost one or more electrons, thus acquiring a charge
cation
a positively charged ion
anion
a negatively charged ion
ionic bond
a chemical bond resulting from the attraction between oppositely charged ions
ionic compounds
a compound resulting from the formation of an ionic bond
hydrogen bond
a type of weak chemical bond that is formed when the slightly positive hydrogen atom of a polar covalent bond in one molecule is attracted to the slightly negative atom of a polar covalent bond in another molecule or in another region of the same molecule
van de waals interactions
weak attractions between molecules or parts of molecules that result from transient local partial charges
chemical reactions
the making and breaking of chemical bonds, leading to changes in the composition of matter
reactants
a starting material in a chemical reaction
products
a material resulting from a chemical reaction
chemical equailibrium
in a chemical reaction, the state in which the rate of the forward reaction equals the rate of the reverse reaction, so that the relative concentrations of the reactants and products do not change with time
macromolecules
a giant molecule formed by the joining of smaller molecules; include polysaccharides, proteins, and nucleic acids
polymer
a long molecule consisting of many similar or identical monomers linked together by covalent bonds
monomers
the subunit that serves as the building block of a polymer
enzymes
a macromolecule serving as a catalyst, a chemical agent that increases the rate of a reaction without being consumed by the reaction
dehydration reaction
a chemical reaction in which two molecules become covalently bonded to each other with the removal of a water molecule
hydrolysis
a chemical reaction that breaks bonds between two molecules by the addition of water; functions in disassembly of polymers to monomers
carbohydrates
a sugar (monosaccharide) or one of its dimers (disaccharides) or polymers (polysaccharides)
monosaccharides
the simplest carbohydrate; active alone or serving as a monomer for disaccharides and polysaccharides
disaccharide
a double sugar, consisting of two monosaccharides joined by a glycosidic linkage formed by a dehydration reaction
glycosidic linkage
a covalent bond formed between two monosaccharides by a dehydration reaction
polysaccharides
a polymer of many monosaccharides, formed by dehydration reactions
glycogen
an extensively branched glucose storage polysaccharide found in the liver and muscle of animals; the animal equivalent of starch
cellulose
a structural polysaccharide of plant cell walls, consisting of glucose monomers joined by beta glycosidic linkages
chitin
a structural polysaccharide, consisting of amino sugar monomers, found in many fungal cell walls and in the exoskeletons of all arthropods
lipids
any of a group of large biological molecules, including fats, phospholipids, and steroids, that mix poorly, if at all, with water
fat
a lipid consisting of three fatty acids linked to one glycerol molecules
fatty acid
a carboxylic acid with a long carbon chain; three linked to a glycerol molecule form a fat molecule
saturated fatty acid
a fatty acid in which all carbons in the hydrocarbon tail are connected by single bonds, thus maximizing the number of hydrogen atoms that are attached to the carbon skeleton
unsaturated fatty acid
a fatty acid that has one or more double bonds between carbons in the hydrocarbon tail; reduces the number of hydrogen atoms attached to the carbon skeleton
trans fat
an unsaturated fat, formed artificially during hydrogenation of oils, containing one or more trans double bonds
phospholipid
a lipid made up of glycerol joined to two fatty acids and a phosphate group; the hydrocarbon chains of the fatty acids act as non-polar, hydrophobic tails, while the rest of the molecules acts as a polar, hydrophilic head
steroids
a type of lipid characterized by a carbon skeleton consisting of four fused rings with various chemical groups attached
cholesterol
a steroid that forms an essential component of animal cell membranes and acts as a precursor molecule for the synthesis of other biologically important steroids, such as many hormones